RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 YEATS2Q9ULM3 1422 aa23.94■■□□□ 1.42
RAF1-202ENST00000416093 HECW2Q9P2P5 1572 aa23.93■■□□□ 1.42
RAF1-202ENST00000416093 CCDC18Q5T9S5 1454 aa23.93■■□□□ 1.42
RAF1-202ENST00000416093 BCORL1Q5H9F3 1711 aa23.93■■□□□ 1.42
RAF1-202ENST00000416093 CEP162Q5TB80 1403 aa23.93■■□□□ 1.42
RAF1-202ENST00000416093 POGZQ7Z3K3 1410 aa23.93■■□□□ 1.42
RAF1-202ENST00000416093 ZFYVE16Q7Z3T8 1539 aa23.9■■□□□ 1.42
RAF1-202ENST00000416093 PTPRMP28827 1452 aa23.9■■□□□ 1.42
RAF1-202ENST00000416093 ARHGAP5Q13017 1502 aa23.89■■□□□ 1.42
RAF1-202ENST00000416093 MAGI2Q86UL8 1455 aa23.89■■□□□ 1.42
RAF1-202ENST00000416093 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
RAF1-202ENST00000416093 MADDQ8WXG6 1647 aa23.86■■□□□ 1.41
RAF1-202ENST00000416093 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
RAF1-202ENST00000416093 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
RAF1-202ENST00000416093 CDC42BPBQ9Y5S2 1711 aa23.84■■□□□ 1.41
RAF1-202ENST00000416093 MLECQ14165 292 aa23.82■■□□□ 1.4
RAF1-202ENST00000416093 ATP10AO60312 1499 aa23.81■■□□□ 1.4
RAF1-202ENST00000416093 ZNF518AQ6AHZ1 1483 aa23.8■■□□□ 1.4
RAF1-202ENST00000416093 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
RAF1-202ENST00000416093 MYT1LQ9UL68 1186 aa23.78■■□□□ 1.4
RAF1-202ENST00000416093 RIMS1Q86UR5 1692 aaKnown RBP23.78■■□□□ 1.4
RAF1-202ENST00000416093 ARHGEF12Q9NZN5 1544 aa23.77■■□□□ 1.4
RAF1-202ENST00000416093 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
RAF1-202ENST00000416093 C9orf84Q5VXU9 1444 aa23.76■■□□□ 1.39
RAF1-202ENST00000416093 TRAPPC8Q9Y2L5 1435 aa23.76■■□□□ 1.39
RAF1-202ENST00000416093 KDM5CP41229 1560 aa23.75■■□□□ 1.39
RAF1-202ENST00000416093 CDC42BPAQ5VT25 1732 aa23.75■■□□□ 1.39
RAF1-202ENST00000416093 ZNF777Q9ULD5 760 aaPredicted RBP23.73■■□□□ 1.39
RAF1-202ENST00000416093 ABCC1P33527 1531 aa23.73■■□□□ 1.39
RAF1-202ENST00000416093 GPATCH8Q9UKJ3 1502 aaKnown RBP23.72■■□□□ 1.39
RAF1-202ENST00000416093 MLH3Q9UHC1 1453 aa23.69■■□□□ 1.38
RAF1-202ENST00000416093 MTUS2Q5JR59 1369 aa23.69■■□□□ 1.38
RAF1-202ENST00000416093 ITSN2Q9NZM3 1697 aa23.69■■□□□ 1.38
RAF1-202ENST00000416093 DIP2CQ9Y2E4 1556 aa23.68■■□□□ 1.38
RAF1-202ENST00000416093 HNRNPMP52272 730 aaKnown RBP eCLIP23.66■■□□□ 1.381e-7■■■■■ 31.3
RAF1-202ENST00000416093 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
RAF1-202ENST00000416093 SAMD9LQ8IVG5 1584 aa23.65■■□□□ 1.38
RAF1-202ENST00000416093 CFDP1Q9UEE9 299 aaPredicted RBP23.65■■□□□ 1.38
RAF1-202ENST00000416093 FER1L4A9Z1Z3 1794 aa23.65■■□□□ 1.38
RAF1-202ENST00000416093 LMTK3Q96Q04 1460 aa23.64■■□□□ 1.38
RAF1-202ENST00000416093 ABCA6Q8N139 1617 aa23.64■■□□□ 1.38
RAF1-202ENST00000416093 VPS8Q8N3P4 1428 aa23.63■■□□□ 1.37
RAF1-202ENST00000416093 ILDR1Q86SU0 546 aaPredicted RBP23.62■■□□□ 1.37
RAF1-202ENST00000416093 CEBPAP49715 358 aaPredicted RBP23.61■■□□□ 1.37
RAF1-202ENST00000416093 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
RAF1-202ENST00000416093 SYCP2Q9BX26 1530 aa23.6■■□□□ 1.37
RAF1-202ENST00000416093 REREQ9P2R6 1566 aa23.6■■□□□ 1.37
RAF1-202ENST00000416093 HSPA2P54652 639 aa23.59■■□□□ 1.37
RAF1-202ENST00000416093 SPAG9O60271 1321 aaKnown RBP23.59■■□□□ 1.37
RAF1-202ENST00000416093 EHBP1L1Q8N3D4 1523 aa23.57■■□□□ 1.36
RAF1-202ENST00000416093 KIAA1107Q9UPP5 1409 aa23.57■■□□□ 1.36
RAF1-202ENST00000416093 ZNF644Q9H582 1327 aaPredicted RBP23.57■■□□□ 1.36
RAF1-202ENST00000416093 AGLP35573 1532 aa23.55■■□□□ 1.36
RAF1-202ENST00000416093 TIAM1Q13009 1591 aa23.55■■□□□ 1.36
RAF1-202ENST00000416093 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
RAF1-202ENST00000416093 ESF1Q9H501 851 aaKnown RBP23.48■■□□□ 1.35
RAF1-202ENST00000416093 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
RAF1-202ENST00000416093 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
RAF1-202ENST00000416093 MBD5Q9P267 1494 aa23.46■■□□□ 1.35
RAF1-202ENST00000416093 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
RAF1-202ENST00000416093 APLP2Q06481 763 aa23.44■■□□□ 1.34
RAF1-202ENST00000416093 SUPT6HQ7KZ85 1726 aaKnown RBP23.43■■□□□ 1.34
RAF1-202ENST00000416093 A2MP01023 1474 aa23.43■■□□□ 1.34
RAF1-202ENST00000416093 C3P01024 1663 aa23.42■■□□□ 1.34
RAF1-202ENST00000416093 PREX1Q8TCU6 1659 aa23.41■■□□□ 1.34
RAF1-202ENST00000416093 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
RAF1-202ENST00000416093 SETD1BQ9UPS6 1966 aaKnown RBP23.4■■□□□ 1.34
RAF1-202ENST00000416093 LRRC9Q6ZRR7 1453 aa23.39■■□□□ 1.34
RAF1-202ENST00000416093 CNTLNQ9NXG0 1405 aa23.39■■□□□ 1.33
RAF1-202ENST00000416093 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
RAF1-202ENST00000416093 UHRF1BP1Q6BDS2 1440 aa23.38■■□□□ 1.33
RAF1-202ENST00000416093 PLXNC1O60486 1568 aa23.38■■□□□ 1.33
RAF1-202ENST00000416093 GGT6Q6P531 493 aa23.37■■□□□ 1.33
RAF1-202ENST00000416093 CAMSAP2Q08AD1 1489 aa23.36■■□□□ 1.33
RAF1-202ENST00000416093 RTEL1-TNFRSF6BF6WH68 1400 aa23.36■■□□□ 1.33
RAF1-202ENST00000416093 ZMYM3Q14202 1370 aa23.35■■□□□ 1.33
RAF1-202ENST00000416093 CCDC141Q6ZP82 1450 aa23.33■■□□□ 1.33
RAF1-202ENST00000416093 RSPH4AQ5TD94 716 aa23.33■■□□□ 1.33
RAF1-202ENST00000416093 FBXO41Q8TF61 875 aa23.33■■□□□ 1.33
RAF1-202ENST00000416093 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
RAF1-202ENST00000416093 DHX29Q7Z478 1369 aaKnown RBP23.31■■□□□ 1.32
RAF1-202ENST00000416093 MROH2AA6NES4 1674 aa23.29■■□□□ 1.32
RAF1-202ENST00000416093 CLTCQ00610 1675 aaKnown RBP23.28■■□□□ 1.32
RAF1-202ENST00000416093 STRCQ7RTU9 1775 aa23.27■■□□□ 1.32
RAF1-202ENST00000416093 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
RAF1-202ENST00000416093 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
RAF1-202ENST00000416093 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
RAF1-202ENST00000416093 NPATQ14207 1427 aa23.26■■□□□ 1.31
RAF1-202ENST00000416093 KIF3BO15066 747 aa23.26■■□□□ 1.31
RAF1-202ENST00000416093 ARHGEF5Q12774 1597 aa23.26■■□□□ 1.31
RAF1-202ENST00000416093 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
RAF1-202ENST00000416093 PTPRKQ15262 1439 aa23.22■■□□□ 1.31
RAF1-202ENST00000416093 MYOM3Q5VTT5 1437 aa23.22■■□□□ 1.31
RAF1-202ENST00000416093 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
RAF1-202ENST00000416093 MIA2Q96PC5 1412 aa23.2■■□□□ 1.3
RAF1-202ENST00000416093 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
RAF1-202ENST00000416093 PTPRTO14522 1441 aa23.16■■□□□ 1.3
RAF1-202ENST00000416093 FBXO31Q5XUX0 539 aaPredicted RBP23.14■■□□□ 1.29
RAF1-202ENST00000416093 CAMSAP1Q5T5Y3 1602 aa23.14■■□□□ 1.29
RAF1-202ENST00000416093 MAST1Q9Y2H9 1570 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms