RNA–Protein interactions for RNA: ENST00000416018.5

FLOT1-203, Transcript of flotillin 1, humanhuman

TSL 3

Gene FLOT1, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-203ENST00000416018 ZMYM4Q5VZL5 1548 aa19.03■□□□□ 0.64
FLOT1-203ENST00000416018 PCF11O94913 1555 aaKnown RBP19.01■□□□□ 0.63
FLOT1-203ENST00000416018 MLECQ14165 292 aa18.98■□□□□ 0.63
FLOT1-203ENST00000416018 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
FLOT1-203ENST00000416018 FMN1Q68DA7 1419 aa18.97■□□□□ 0.63
FLOT1-203ENST00000416018 SCAPERQ9BY12 1400 aa18.97■□□□□ 0.63
FLOT1-203ENST00000416018 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
FLOT1-203ENST00000416018 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
FLOT1-203ENST00000416018 PLCH2O75038 1416 aa18.95■□□□□ 0.62
FLOT1-203ENST00000416018 ARHGAP5Q13017 1502 aa18.93■□□□□ 0.62
FLOT1-203ENST00000416018 HSPA2P54652 639 aa18.91■□□□□ 0.62
FLOT1-203ENST00000416018 TROQ12816 1431 aaPredicted RBP18.9■□□□□ 0.62
FLOT1-203ENST00000416018 MAGI2Q86UL8 1455 aa18.89■□□□□ 0.61
FLOT1-203ENST00000416018 CDC42BPAQ5VT25 1732 aa18.88■□□□□ 0.61
FLOT1-203ENST00000416018 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
FLOT1-203ENST00000416018 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
FLOT1-203ENST00000416018 ITSN2Q9NZM3 1697 aa18.85■□□□□ 0.61
FLOT1-203ENST00000416018 CLIP1P30622 1438 aa18.85■□□□□ 0.61
FLOT1-203ENST00000416018 C9orf84Q5VXU9 1444 aa18.85■□□□□ 0.61
FLOT1-203ENST00000416018 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
FLOT1-203ENST00000416018 DIP2CQ9Y2E4 1556 aa18.85■□□□□ 0.61
FLOT1-203ENST00000416018 ATP10AO60312 1499 aa18.84■□□□□ 0.61
FLOT1-203ENST00000416018 MYT1LQ9UL68 1186 aa18.84■□□□□ 0.61
FLOT1-203ENST00000416018 CDK11AQ9UQ88 783 aaPredicted RBP18.84■□□□□ 0.61
FLOT1-203ENST00000416018 KDM5CP41229 1560 aa18.84■□□□□ 0.61
FLOT1-203ENST00000416018 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
FLOT1-203ENST00000416018 PREX1Q8TCU6 1659 aa18.83■□□□□ 0.61
FLOT1-203ENST00000416018 ZNF518AQ6AHZ1 1483 aa18.83■□□□□ 0.6
FLOT1-203ENST00000416018 AFAP1Q8N556 730 aa18.82■□□□□ 0.6
FLOT1-203ENST00000416018 ABCC1P33527 1531 aa18.8■□□□□ 0.6
FLOT1-203ENST00000416018 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
FLOT1-203ENST00000416018 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
FLOT1-203ENST00000416018 CCDC18Q5T9S5 1454 aa18.78■□□□□ 0.6
FLOT1-203ENST00000416018 CASKIN1Q8WXD9 1431 aa18.78■□□□□ 0.6
FLOT1-203ENST00000416018 C3P01024 1663 aa18.78■□□□□ 0.6
FLOT1-203ENST00000416018 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
FLOT1-203ENST00000416018 TRAPPC8Q9Y2L5 1435 aa18.77■□□□□ 0.6
FLOT1-203ENST00000416018 STRCQ7RTU9 1775 aa18.74■□□□□ 0.59
FLOT1-203ENST00000416018 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
FLOT1-203ENST00000416018 SAMD9LQ8IVG5 1584 aa18.73■□□□□ 0.59
FLOT1-203ENST00000416018 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
FLOT1-203ENST00000416018 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
FLOT1-203ENST00000416018 SUPT6HQ7KZ85 1726 aaKnown RBP18.73■□□□□ 0.59
FLOT1-203ENST00000416018 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
FLOT1-203ENST00000416018 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
FLOT1-203ENST00000416018 SETD1BQ9UPS6 1966 aaKnown RBP18.71■□□□□ 0.59
FLOT1-203ENST00000416018 REREQ9P2R6 1566 aa18.71■□□□□ 0.59
FLOT1-203ENST00000416018 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
FLOT1-203ENST00000416018 UHRF1BP1Q6BDS2 1440 aa18.65■□□□□ 0.58
FLOT1-203ENST00000416018 GPATCH8Q9UKJ3 1502 aaKnown RBP18.64■□□□□ 0.57
FLOT1-203ENST00000416018 AGLP35573 1532 aa18.63■□□□□ 0.57
FLOT1-203ENST00000416018 CLTCQ00610 1675 aaKnown RBP18.63■□□□□ 0.57
FLOT1-203ENST00000416018 HNRNPMP52272 730 aaKnown RBP eCLIP18.61■□□□□ 0.57
FLOT1-203ENST00000416018 INO80Q9ULG1 1556 aaPredicted RBP18.6■□□□□ 0.57
FLOT1-203ENST00000416018 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
FLOT1-203ENST00000416018 CERKQ8TCT0 537 aa18.6■□□□□ 0.57
FLOT1-203ENST00000416018 ESF1Q9H501 851 aaKnown RBP18.59■□□□□ 0.57
FLOT1-203ENST00000416018 MROH2AA6NES4 1674 aa18.58■□□□□ 0.57
FLOT1-203ENST00000416018 TIAM1Q13009 1591 aa18.58■□□□□ 0.56
FLOT1-203ENST00000416018 MTUS2Q5JR59 1369 aa18.56■□□□□ 0.56
FLOT1-203ENST00000416018 SPAG9O60271 1321 aaKnown RBP18.56■□□□□ 0.56
FLOT1-203ENST00000416018 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
FLOT1-203ENST00000416018 PLXNC1O60486 1568 aa18.55■□□□□ 0.56
FLOT1-203ENST00000416018 CFDP1Q9UEE9 299 aaPredicted RBP18.54■□□□□ 0.56
FLOT1-203ENST00000416018 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
FLOT1-203ENST00000416018 EHBP1L1Q8N3D4 1523 aa18.53■□□□□ 0.56
FLOT1-203ENST00000416018 MYO3AQ8NEV4 1616 aa18.52■□□□□ 0.56
FLOT1-203ENST00000416018 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.56
FLOT1-203ENST00000416018 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
FLOT1-203ENST00000416018 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
FLOT1-203ENST00000416018 A2MP01023 1474 aa18.51■□□□□ 0.55
FLOT1-203ENST00000416018 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
FLOT1-203ENST00000416018 PLEKHH2Q8IVE3 1493 aa18.49■□□□□ 0.55
FLOT1-203ENST00000416018 KIAA1107Q9UPP5 1409 aa18.48■□□□□ 0.55
FLOT1-203ENST00000416018 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
FLOT1-203ENST00000416018 GGT6Q6P531 493 aa18.47■□□□□ 0.55
FLOT1-203ENST00000416018 NCOA1Q15788 1441 aa18.47■□□□□ 0.55
FLOT1-203ENST00000416018 ZMYM3Q14202 1370 aa18.46■□□□□ 0.55
FLOT1-203ENST00000416018 DMRT2Q9Y5R5 561 aa18.44■□□□□ 0.54
FLOT1-203ENST00000416018 LTBP4Q8N2S1 1624 aa18.44■□□□□ 0.54
FLOT1-203ENST00000416018 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
FLOT1-203ENST00000416018 PTPRTO14522 1441 aa18.43■□□□□ 0.54
FLOT1-203ENST00000416018 NPATQ14207 1427 aa18.42■□□□□ 0.54
FLOT1-203ENST00000416018 MBD5Q9P267 1494 aa18.42■□□□□ 0.54
FLOT1-203ENST00000416018 NCKAP5LQ9HCH0 1330 aa18.42■□□□□ 0.54
FLOT1-203ENST00000416018 CAMSAP2Q08AD1 1489 aa18.41■□□□□ 0.54
FLOT1-203ENST00000416018 NCOA2Q15596 1464 aa18.4■□□□□ 0.54
FLOT1-203ENST00000416018 PTPRKQ15262 1439 aa18.4■□□□□ 0.54
FLOT1-203ENST00000416018 MAP3K1Q13233 1512 aa18.38■□□□□ 0.53
FLOT1-203ENST00000416018 POLR1AO95602 1720 aaPredicted RBP18.37■□□□□ 0.53
FLOT1-203ENST00000416018 CFAP65Q6ZU64 1925 aaKnown RBP18.37■□□□□ 0.53
FLOT1-203ENST00000416018 CCDC141Q6ZP82 1450 aa18.37■□□□□ 0.53
FLOT1-203ENST00000416018 LRRC9Q6ZRR7 1453 aa18.35■□□□□ 0.53
FLOT1-203ENST00000416018 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
FLOT1-203ENST00000416018 APLP2Q06481 763 aa18.35■□□□□ 0.53
FLOT1-203ENST00000416018 DNMT1P26358 1616 aaKnown RBP18.34■□□□□ 0.53
FLOT1-203ENST00000416018 DISP3Q9P2K9 1392 aa18.32■□□□□ 0.52
FLOT1-203ENST00000416018 KIF3BO15066 747 aa18.32■□□□□ 0.52
FLOT1-203ENST00000416018 RTEL1-TNFRSF6BF6WH68 1400 aa18.32■□□□□ 0.52
FLOT1-203ENST00000416018 SPATA31D1Q6ZQQ2 1576 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms