RNA–Protein interactions for RNA: ENST00000415548.1

CCT3-208, Transcript of chaperonin containing TCP1 subunit 3, human

TSL 3

Gene CCT3, Length 513 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCT3-208	ENST00000415548	ARHGAP5	Q13017	1502 aa		13.39	□□□□□ -0.27
CCT3-208	ENST00000415548	RICTOR	Q6R327	1708 aa		13.39	□□□□□ -0.27
CCT3-208	ENST00000415548	ADGRL1	O94910	1474 aa		13.39	□□□□□ -0.27
CCT3-208	ENST00000415548	SCAPER	Q9BY12	1400 aa		13.39	□□□□□ -0.27
CCT3-208	ENST00000415548	CDC42BPB	Q9Y5S2	1711 aa		13.38	□□□□□ -0.27
CCT3-208	ENST00000415548	MSH5	O43196	834 aa		13.37	□□□□□ -0.27
CCT3-208	ENST00000415548	MTUS2	Q5JR59	1369 aa		13.36	□□□□□ -0.27
CCT3-208	ENST00000415548	PREX2	Q70Z35	1606 aa		13.36	□□□□□ -0.27
CCT3-208	ENST00000415548	VPS8	Q8N3P4	1428 aa		13.36	□□□□□ -0.27
CCT3-208	ENST00000415548	CDC42BPA	Q5VT25	1732 aa		13.36	□□□□□ -0.27
CCT3-208	ENST00000415548	POGZ	Q7Z3K3	1410 aa		13.35	□□□□□ -0.27
CCT3-208	ENST00000415548	ZMYM4	Q5VZL5	1548 aa		13.34	□□□□□ -0.27
CCT3-208	ENST00000415548	EHBP1L1	Q8N3D4	1523 aa		13.33	□□□□□ -0.28
CCT3-208	ENST00000415548	ARHGEF40	Q8TER5	1519 aa		13.33	□□□□□ -0.28
CCT3-208	ENST00000415548	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.33	□□□□□ -0.28
CCT3-208	ENST00000415548	YEATS2	Q9ULM3	1422 aa		13.31	□□□□□ -0.28
CCT3-208	ENST00000415548	ZFYVE16	Q7Z3T8	1539 aa		13.31	□□□□□ -0.28
CCT3-208	ENST00000415548	TIAM1	Q13009	1591 aa		13.31	□□□□□ -0.28
CCT3-208	ENST00000415548	CCNB3	Q8WWL7	1395 aa		13.31	□□□□□ -0.28
CCT3-208	ENST00000415548	ABCC1	P33527	1531 aa		13.3	□□□□□ -0.28
CCT3-208	ENST00000415548	ARHGEF12	Q9NZN5	1544 aa		13.3	□□□□□ -0.28
CCT3-208	ENST00000415548	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.3	□□□□□ -0.28
CCT3-208	ENST00000415548	AFAP1	Q8N556	730 aa		13.3	□□□□□ -0.28
CCT3-208	ENST00000415548	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.3	□□□□□ -0.28
CCT3-208	ENST00000415548	ZNF518A	Q6AHZ1	1483 aa		13.29	□□□□□ -0.28
CCT3-208	ENST00000415548	MAGI2	Q86UL8	1455 aa		13.29	□□□□□ -0.28
CCT3-208	ENST00000415548	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.29	□□□□□ -0.28
CCT3-208	ENST00000415548	ITSN2	Q9NZM3	1697 aa		13.28	□□□□□ -0.28
CCT3-208	ENST00000415548	TRAPPC8	Q9Y2L5	1435 aa		13.28	□□□□□ -0.28
CCT3-208	ENST00000415548	KDM5C	P41229	1560 aa		13.28	□□□□□ -0.28
CCT3-208	ENST00000415548	SAMD9L	Q8IVG5	1584 aa		13.28	□□□□□ -0.28
CCT3-208	ENST00000415548	CFDP1	Q9UEE9	299 aa	Predicted RBP	13.27	□□□□□ -0.29
CCT3-208	ENST00000415548	NCOA2	Q15596	1464 aa		13.26	□□□□□ -0.29
CCT3-208	ENST00000415548	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.26	□□□□□ -0.29
CCT3-208	ENST00000415548	SIGLEC1	Q9BZZ2	1709 aa		13.26	□□□□□ -0.29
CCT3-208	ENST00000415548	SYCP2	Q9BX26	1530 aa		13.25	□□□□□ -0.29
CCT3-208	ENST00000415548	LRRC9	Q6ZRR7	1453 aa		13.25	□□□□□ -0.29
CCT3-208	ENST00000415548	BCORL1	Q5H9F3	1711 aa		13.25	□□□□□ -0.29
CCT3-208	ENST00000415548	ADAMTSL3	P82987	1691 aa		13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	HECW2	Q9P2P5	1572 aa		13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	MAP3K1	Q13233	1512 aa		13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	ATP10A	O60312	1499 aa		13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	HNRNPM	P52272	730 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	KANK4	Q5T7N3	995 aa	Predicted RBP	13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	MYT1L	Q9UL68	1186 aa		13.24	□□□□□ -0.29
CCT3-208	ENST00000415548	ZNF644	Q9H582	1327 aa	Predicted RBP	13.23	□□□□□ -0.29
CCT3-208	ENST00000415548	PLEKHH2	Q8IVE3	1493 aa		13.23	□□□□□ -0.29
CCT3-208	ENST00000415548	MLH3	Q9UHC1	1453 aa		13.23	□□□□□ -0.29
CCT3-208	ENST00000415548	C9orf84	Q5VXU9	1444 aa		13.22	□□□□□ -0.29
CCT3-208	ENST00000415548	KIAA1107	Q9UPP5	1409 aa		13.22	□□□□□ -0.29
CCT3-208	ENST00000415548	PPP6R1	Q9UPN7	881 aa		13.22	□□□□□ -0.29
CCT3-208	ENST00000415548	DIP2C	Q9Y2E4	1556 aa		13.22	□□□□□ -0.29
CCT3-208	ENST00000415548	ABCA6	Q8N139	1617 aa		13.21	□□□□□ -0.29
CCT3-208	ENST00000415548	MADD	Q8WXG6	1647 aa		13.21	□□□□□ -0.29
CCT3-208	ENST00000415548	KIDINS220	Q9ULH0	1771 aa		13.2	□□□□□ -0.3
CCT3-208	ENST00000415548	ADRA2B	P18089	450 aa		13.2	□□□□□ -0.3
CCT3-208	ENST00000415548	MLEC	Q14165	292 aa		13.2	□□□□□ -0.3
CCT3-208	ENST00000415548	APLP2	Q06481	763 aa		13.19	□□□□□ -0.3
CCT3-208	ENST00000415548	SPAG9	O60271	1321 aa	Known RBP	13.18	□□□□□ -0.3
CCT3-208	ENST00000415548	PTPRM	P28827	1452 aa		13.18	□□□□□ -0.3
CCT3-208	ENST00000415548	MBD5	Q9P267	1494 aa		13.17	□□□□□ -0.3
CCT3-208	ENST00000415548	RERE	Q9P2R6	1566 aa		13.17	□□□□□ -0.3
CCT3-208	ENST00000415548	RIMS1	Q86UR5	1692 aa	Known RBP	13.17	□□□□□ -0.3
CCT3-208	ENST00000415548	CAMSAP2	Q08AD1	1489 aa		13.16	□□□□□ -0.3
CCT3-208	ENST00000415548	ATP7A	Q04656	1500 aa		13.16	□□□□□ -0.3
CCT3-208	ENST00000415548	INO80	Q9ULG1	1556 aa	Predicted RBP	13.15	□□□□□ -0.3
CCT3-208	ENST00000415548	FER1L4	A9Z1Z3	1794 aa		13.14	□□□□□ -0.31
CCT3-208	ENST00000415548	MYOM3	Q5VTT5	1437 aa		13.13	□□□□□ -0.31
CCT3-208	ENST00000415548	AGL	P35573	1532 aa		13.13	□□□□□ -0.31
CCT3-208	ENST00000415548	CCDC141	Q6ZP82	1450 aa		13.12	□□□□□ -0.31
CCT3-208	ENST00000415548	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.1	□□□□□ -0.31
CCT3-208	ENST00000415548	MIA2	Q96PC5	1412 aa		13.1	□□□□□ -0.31
CCT3-208	ENST00000415548	ARHGEF5	Q12774	1597 aa		13.1	□□□□□ -0.31
CCT3-208	ENST00000415548	A2M	P01023	1474 aa		13.1	□□□□□ -0.31
CCT3-208	ENST00000415548	PLXNC1	O60486	1568 aa		13.09	□□□□□ -0.31
CCT3-208	ENST00000415548	RSPH4A	Q5TD94	716 aa		13.09	□□□□□ -0.31
CCT3-208	ENST00000415548	ADGB	Q8N7X0	1667 aa		13.08	□□□□□ -0.32
CCT3-208	ENST00000415548	TSPY4	P0CV99	314 aa		13.06	□□□□□ -0.32
CCT3-208	ENST00000415548	TSPY10	P0CW01	314 aa		13.06	□□□□□ -0.32
CCT3-208	ENST00000415548	CEBPA	P49715	358 aa	Predicted RBP	13.06	□□□□□ -0.32
CCT3-208	ENST00000415548	PTPN23	Q9H3S7	1636 aa		13.06	□□□□□ -0.32
CCT3-208	ENST00000415548	DHX29	Q7Z478	1369 aa	Known RBP	13.05	□□□□□ -0.32
CCT3-208	ENST00000415548	FGD6	Q6ZV73	1430 aa		13.05	□□□□□ -0.32
CCT3-208	ENST00000415548	ESF1	Q9H501	851 aa	Known RBP	13.04	□□□□□ -0.32
CCT3-208	ENST00000415548	MAST1	Q9Y2H9	1570 aa		13.03	□□□□□ -0.32
CCT3-208	ENST00000415548	GGT6	Q6P531	493 aa		13.03	□□□□□ -0.32
CCT3-208	ENST00000415548	POTED	Q86YR6	584 aa		13.02	□□□□□ -0.33
CCT3-208	ENST00000415548	TCOF1	Q13428	1488 aa	Known RBP	13.02	□□□□□ -0.33
CCT3-208	ENST00000415548	LMTK3	Q96Q04	1460 aa		13.02	□□□□□ -0.33
CCT3-208	ENST00000415548	C3	P01024	1663 aa		13.02	□□□□□ -0.33
CCT3-208	ENST00000415548	ABCC5	O15440	1437 aa		13.01	□□□□□ -0.33
CCT3-208	ENST00000415548	CNTLN	Q9NXG0	1405 aa		13.01	□□□□□ -0.33
CCT3-208	ENST00000415548	KIF3B	O15066	747 aa		13	□□□□□ -0.33
CCT3-208	ENST00000415548	PPARGC1B	Q86YN6	1023 aa	Known RBP	13	□□□□□ -0.33
CCT3-208	ENST00000415548	CROCC2	H7BZ55	1655 aa		12.99	□□□□□ -0.33
CCT3-208	ENST00000415548	CLTC	Q00610	1675 aa	Known RBP	12.99	□□□□□ -0.33
CCT3-208	ENST00000415548	DAPK1	P53355	1430 aa		12.99	□□□□□ -0.33
CCT3-208	ENST00000415548	MROH2A	A6NES4	1674 aa		12.99	□□□□□ -0.33
CCT3-208	ENST00000415548	DNMT1	P26358	1616 aa	Known RBP	12.99	□□□□□ -0.33
CCT3-208	ENST00000415548	SHANK2	Q9UPX8	1470 aa		12.98	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms