RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 PTPRMP28827 1452 aa19.72■□□□□ 0.75
SSR4P1-201ENST00000415143 DIEXFQ68CQ4 756 aaKnown RBP19.71■□□□□ 0.75
SSR4P1-201ENST00000415143 RAB3GAP2Q9H2M9 1393 aa19.7■□□□□ 0.74
SSR4P1-201ENST00000415143 MYOM3Q5VTT5 1437 aa19.68■□□□□ 0.74
SSR4P1-201ENST00000415143 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
SSR4P1-201ENST00000415143 WDR7Q9Y4E6 1490 aa19.67■□□□□ 0.74
SSR4P1-201ENST00000415143 CDK11AQ9UQ88 783 aaPredicted RBP19.67■□□□□ 0.74
SSR4P1-201ENST00000415143 ADAMTSL3P82987 1691 aa19.67■□□□□ 0.74
SSR4P1-201ENST00000415143 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
SSR4P1-201ENST00000415143 MAGI3Q5TCQ9 1506 aa19.66■□□□□ 0.74
SSR4P1-201ENST00000415143 ACIN1Q9UKV3 1341 aaKnown RBP19.65■□□□□ 0.74
SSR4P1-201ENST00000415143 TIMELESSQ9UNS1 1208 aa19.61■□□□□ 0.73
SSR4P1-201ENST00000415143 CERKQ8TCT0 537 aa19.6■□□□□ 0.73
SSR4P1-201ENST00000415143 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
SSR4P1-201ENST00000415143 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
SSR4P1-201ENST00000415143 ABCA8O94911 1581 aa19.58■□□□□ 0.73
SSR4P1-201ENST00000415143 KCNH8Q96L42 1107 aa19.58■□□□□ 0.72
SSR4P1-201ENST00000415143 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
SSR4P1-201ENST00000415143 TCOF1Q13428 1488 aaKnown RBP19.55■□□□□ 0.72
SSR4P1-201ENST00000415143 HSPA2P54652 639 aa19.55■□□□□ 0.72
SSR4P1-201ENST00000415143 BCORL1Q5H9F3 1711 aa19.55■□□□□ 0.72
SSR4P1-201ENST00000415143 RAPGEF6Q8TEU7 1601 aa19.54■□□□□ 0.72
SSR4P1-201ENST00000415143 HFM1A2PYH4 1435 aa19.54■□□□□ 0.72
SSR4P1-201ENST00000415143 PTPN23Q9H3S7 1636 aa19.54■□□□□ 0.72
SSR4P1-201ENST00000415143 ARAP3Q8WWN8 1544 aa19.52■□□□□ 0.72
SSR4P1-201ENST00000415143 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
SSR4P1-201ENST00000415143 ARID4BQ4LE39 1312 aaPredicted RBP19.5■□□□□ 0.71
SSR4P1-201ENST00000415143 RIMS1Q86UR5 1692 aaKnown RBP19.49■□□□□ 0.71
SSR4P1-201ENST00000415143 AKNAQ7Z591 1439 aa19.49■□□□□ 0.71
SSR4P1-201ENST00000415143 CDK13Q14004 1512 aaKnown RBP19.48■□□□□ 0.71
SSR4P1-201ENST00000415143 NUP153P49790 1475 aaKnown RBP19.47■□□□□ 0.71
SSR4P1-201ENST00000415143 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
SSR4P1-201ENST00000415143 CENPBP07199 599 aaPredicted RBP19.43■□□□□ 0.7
SSR4P1-201ENST00000415143 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
SSR4P1-201ENST00000415143 RAPGEF3O95398 923 aa19.42■□□□□ 0.7
SSR4P1-201ENST00000415143 NAIPQ13075 1403 aa19.42■□□□□ 0.7
SSR4P1-201ENST00000415143 ATP10BO94823 1461 aa19.4■□□□□ 0.7
SSR4P1-201ENST00000415143 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
SSR4P1-201ENST00000415143 ROCK1Q13464 1354 aa19.38■□□□□ 0.69
SSR4P1-201ENST00000415143 PLEKHD1A6NEE1 506 aa19.37■□□□□ 0.69
SSR4P1-201ENST00000415143 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
SSR4P1-201ENST00000415143 GCC2Q8IWJ2 1684 aa19.34■□□□□ 0.69
SSR4P1-201ENST00000415143 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
SSR4P1-201ENST00000415143 ARID3CA6NKF2 412 aa19.34■□□□□ 0.69
SSR4P1-201ENST00000415143 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
SSR4P1-201ENST00000415143 ABCA9Q8IUA7 1624 aa19.32■□□□□ 0.68
SSR4P1-201ENST00000415143 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
SSR4P1-201ENST00000415143 CFDP1Q9UEE9 299 aaPredicted RBP19.31■□□□□ 0.68
SSR4P1-201ENST00000415143 DAPK1P53355 1430 aa19.31■□□□□ 0.68
SSR4P1-201ENST00000415143 ARHGEF40Q8TER5 1519 aa19.3■□□□□ 0.68
SSR4P1-201ENST00000415143 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
SSR4P1-201ENST00000415143 SIN3AQ96ST3 1273 aa19.29■□□□□ 0.68
SSR4P1-201ENST00000415143 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
SSR4P1-201ENST00000415143 NEO1Q92859 1461 aa19.28■□□□□ 0.68
SSR4P1-201ENST00000415143 CHIC2Q9UKJ5 165 aa19.28■□□□□ 0.68
SSR4P1-201ENST00000415143 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.68
SSR4P1-201ENST00000415143 TRIM52Q96A61 297 aa19.27■□□□□ 0.68
SSR4P1-201ENST00000415143 KIF14Q15058 1648 aa19.25■□□□□ 0.67
SSR4P1-201ENST00000415143 ABCC5O15440 1437 aa19.25■□□□□ 0.67
SSR4P1-201ENST00000415143 GPATCH8Q9UKJ3 1502 aaKnown RBP19.24■□□□□ 0.67
SSR4P1-201ENST00000415143 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
SSR4P1-201ENST00000415143 FER1L4A9Z1Z3 1794 aa19.24■□□□□ 0.67
SSR4P1-201ENST00000415143 FANCAO15360 1455 aa19.23■□□□□ 0.67
SSR4P1-201ENST00000415143 MIER1Q8N108 512 aa19.22■□□□□ 0.67
SSR4P1-201ENST00000415143 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
SSR4P1-201ENST00000415143 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
SSR4P1-201ENST00000415143 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
SSR4P1-201ENST00000415143 PREX1Q8TCU6 1659 aa19.21■□□□□ 0.67
SSR4P1-201ENST00000415143 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
SSR4P1-201ENST00000415143 YEATS2Q9ULM3 1422 aa19.2■□□□□ 0.66
SSR4P1-201ENST00000415143 MLECQ14165 292 aa19.2■□□□□ 0.66
SSR4P1-201ENST00000415143 TTC37Q6PGP7 1564 aa19.19■□□□□ 0.66
SSR4P1-201ENST00000415143 DMRT2Q9Y5R5 561 aa19.19■□□□□ 0.66
SSR4P1-201ENST00000415143 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
SSR4P1-201ENST00000415143 RSPH4AQ5TD94 716 aa19.18■□□□□ 0.66
SSR4P1-201ENST00000415143 MPHOSPH9Q99550 1183 aa19.18■□□□□ 0.66
SSR4P1-201ENST00000415143 DENND4BO75064 1496 aaPredicted RBP19.17■□□□□ 0.66
SSR4P1-201ENST00000415143 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
SSR4P1-201ENST00000415143 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
SSR4P1-201ENST00000415143 ZNF777Q9ULD5 760 aaPredicted RBP19.15■□□□□ 0.66
SSR4P1-201ENST00000415143 TSPY4P0CV99 314 aa19.14■□□□□ 0.65
SSR4P1-201ENST00000415143 TSPY10P0CW01 314 aa19.14■□□□□ 0.65
SSR4P1-201ENST00000415143 ZNF644Q9H582 1327 aaPredicted RBP19.14■□□□□ 0.65
SSR4P1-201ENST00000415143 SHANK2Q9UPX8 1470 aa19.14■□□□□ 0.65
SSR4P1-201ENST00000415143 ZFYVE16Q7Z3T8 1539 aa19.13■□□□□ 0.65
SSR4P1-201ENST00000415143 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
SSR4P1-201ENST00000415143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.11■□□□□ 0.65
SSR4P1-201ENST00000415143 ZMYM4Q5VZL5 1548 aa19.1■□□□□ 0.65
SSR4P1-201ENST00000415143 CROCC2H7BZ55 1655 aa19.09■□□□□ 0.65
SSR4P1-201ENST00000415143 CEBPAP49715 358 aaPredicted RBP19.09■□□□□ 0.65
SSR4P1-201ENST00000415143 SLC4A1APQ9BWU0 796 aaKnown RBP19.07■□□□□ 0.64
SSR4P1-201ENST00000415143 CDC42BPAQ5VT25 1732 aa19.07■□□□□ 0.64
SSR4P1-201ENST00000415143 LTBP4Q8N2S1 1624 aa19.07■□□□□ 0.64
SSR4P1-201ENST00000415143 ARHGEF5Q12774 1597 aa19.06■□□□□ 0.64
SSR4P1-201ENST00000415143 CFAP74Q9C0B2 1584 aa19.06■□□□□ 0.64
SSR4P1-201ENST00000415143 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
SSR4P1-201ENST00000415143 ARHGEF12Q9NZN5 1544 aa19.05■□□□□ 0.64
SSR4P1-201ENST00000415143 PTPRTO14522 1441 aa19.05■□□□□ 0.64
SSR4P1-201ENST00000415143 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
SSR4P1-201ENST00000415143 PLEKHH2Q8IVE3 1493 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms