RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 ERCC6L2Q5T890 1561 aa14.97□□□□□ -0.01
LINC01888-201ENST00000415138 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
LINC01888-201ENST00000415138 KIAA0556O60303 1618 aa14.93□□□□□ -0.02
LINC01888-201ENST00000415138 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
LINC01888-201ENST00000415138 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
LINC01888-201ENST00000415138 P3H3Q8IVL6 736 aa14.92□□□□□ -0.02
LINC01888-201ENST00000415138 PTPRGP23470 1445 aa14.92□□□□□ -0.02
LINC01888-201ENST00000415138 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
LINC01888-201ENST00000415138 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
LINC01888-201ENST00000415138 MNX1P50219 401 aaPredicted RBP14.91□□□□□ -0.02
LINC01888-201ENST00000415138 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
LINC01888-201ENST00000415138 LOC105371045A0A1W2PR82 267 aa14.9□□□□□ -0.02
LINC01888-201ENST00000415138 MIER1Q8N108 512 aa14.9□□□□□ -0.02
LINC01888-201ENST00000415138 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
LINC01888-201ENST00000415138 SAMD9Q5K651 1589 aa14.87□□□□□ -0.03
LINC01888-201ENST00000415138 CLCN6P51797 869 aa14.87□□□□□ -0.03
LINC01888-201ENST00000415138 ZNF579Q8NAF0 562 aaKnown RBP14.85□□□□□ -0.03
LINC01888-201ENST00000415138 PLCD3Q8N3E9 789 aa14.82□□□□□ -0.04
LINC01888-201ENST00000415138 CLIP1P30622 1438 aa14.81□□□□□ -0.04
LINC01888-201ENST00000415138 FHOD3Q2V2M9 1422 aa14.8□□□□□ -0.04
LINC01888-201ENST00000415138 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
LINC01888-201ENST00000415138 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
LINC01888-201ENST00000415138 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
LINC01888-201ENST00000415138 FMN1Q68DA7 1419 aa14.77□□□□□ -0.04
LINC01888-201ENST00000415138 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
LINC01888-201ENST00000415138 CEP162Q5TB80 1403 aa14.76□□□□□ -0.05
LINC01888-201ENST00000415138 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
LINC01888-201ENST00000415138 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
LINC01888-201ENST00000415138 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
LINC01888-201ENST00000415138 PLB1Q6P1J6 1458 aa14.74□□□□□ -0.05
LINC01888-201ENST00000415138 ABCA8O94911 1581 aa14.73□□□□□ -0.05
LINC01888-201ENST00000415138 FBXO3Q9UK99 471 aa14.73□□□□□ -0.05
LINC01888-201ENST00000415138 PHF12Q96QT6 1004 aa14.72□□□□□ -0.05
LINC01888-201ENST00000415138 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
LINC01888-201ENST00000415138 ZCCHC11Q5TAX3 1644 aaKnown RBP14.7□□□□□ -0.06
LINC01888-201ENST00000415138 ARID3CA6NKF2 412 aa14.69□□□□□ -0.06
LINC01888-201ENST00000415138 DCBLD2Q96PD2 775 aa14.69□□□□□ -0.06
LINC01888-201ENST00000415138 ZBTB47Q9UFB7 747 aaPredicted RBP14.69□□□□□ -0.06
LINC01888-201ENST00000415138 HECW1Q76N89 1606 aa14.69□□□□□ -0.06
LINC01888-201ENST00000415138 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
LINC01888-201ENST00000415138 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
LINC01888-201ENST00000415138 GALR2O43603 387 aaPredicted RBP14.65□□□□□ -0.06
LINC01888-201ENST00000415138 CDK11AQ9UQ88 783 aaPredicted RBP14.64□□□□□ -0.07
LINC01888-201ENST00000415138 MAPKBP1O60336 1514 aa14.64□□□□□ -0.07
LINC01888-201ENST00000415138 PLEKHD1A6NEE1 506 aa14.63□□□□□ -0.07
LINC01888-201ENST00000415138 CASKIN1Q8WXD9 1431 aa14.63□□□□□ -0.07
LINC01888-201ENST00000415138 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
LINC01888-201ENST00000415138 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
LINC01888-201ENST00000415138 ATP10BO94823 1461 aa14.62□□□□□ -0.07
LINC01888-201ENST00000415138 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
LINC01888-201ENST00000415138 ASXL2Q76L83 1435 aa14.61□□□□□ -0.07
LINC01888-201ENST00000415138 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
LINC01888-201ENST00000415138 FYCO1Q9BQS8 1478 aa14.61□□□□□ -0.07
LINC01888-201ENST00000415138 DAXXQ9UER7 740 aaPredicted RBP14.6□□□□□ -0.07
LINC01888-201ENST00000415138 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
LINC01888-201ENST00000415138 FAM69CQ0P6D2 419 aa14.59□□□□□ -0.07
LINC01888-201ENST00000415138 RASEFQ8IZ41 740 aa14.59□□□□□ -0.07
LINC01888-201ENST00000415138 EPRSP07814 1512 aaKnown RBP14.59□□□□□ -0.07
LINC01888-201ENST00000415138 KIF13AQ9H1H9 1805 aa14.58□□□□□ -0.08
LINC01888-201ENST00000415138 LRRIQ1Q96JM4 1722 aa14.58□□□□□ -0.08
LINC01888-201ENST00000415138 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
LINC01888-201ENST00000415138 WDR7Q9Y4E6 1490 aa14.57□□□□□ -0.08
LINC01888-201ENST00000415138 CCDC61Q9Y6R9 512 aa14.57□□□□□ -0.08
LINC01888-201ENST00000415138 CDK13Q14004 1512 aaKnown RBP14.56□□□□□ -0.08
LINC01888-201ENST00000415138 TSPOAP1O95153 1857 aa14.55□□□□□ -0.08
LINC01888-201ENST00000415138 ABCC10Q5T3U5 1492 aa14.55□□□□□ -0.08
LINC01888-201ENST00000415138 DIP2BQ9P265 1576 aa14.54□□□□□ -0.08
LINC01888-201ENST00000415138 MS4A3Q96HJ5 214 aa14.52□□□□□ -0.09
LINC01888-201ENST00000415138 GLI2P10070 1586 aa14.51□□□□□ -0.09
LINC01888-201ENST00000415138 CFAP43Q8NDM7 1665 aa14.5□□□□□ -0.09
LINC01888-201ENST00000415138 NUBP1P53384 320 aa14.5□□□□□ -0.09
LINC01888-201ENST00000415138 VASPP50552 380 aaPredicted RBP14.49□□□□□ -0.09
LINC01888-201ENST00000415138 MTUS2Q5JR59 1369 aa14.48□□□□□ -0.09
LINC01888-201ENST00000415138 LHX8Q68G74 356 aa14.48□□□□□ -0.09
LINC01888-201ENST00000415138 KIF12Q96FN5 646 aa14.48□□□□□ -0.09
LINC01888-201ENST00000415138 KIF14Q15058 1648 aa14.48□□□□□ -0.09
LINC01888-201ENST00000415138 TROQ12816 1431 aaPredicted RBP14.47□□□□□ -0.09
LINC01888-201ENST00000415138 MAP3K4Q9Y6R4 1608 aa14.46□□□□□ -0.09
LINC01888-201ENST00000415138 CENPBP07199 599 aaPredicted RBP14.46□□□□□ -0.09
LINC01888-201ENST00000415138 KLHL34Q8N239 644 aa14.46□□□□□ -0.09
LINC01888-201ENST00000415138 FAM212AQ96EL1 285 aa14.46□□□□□ -0.09
LINC01888-201ENST00000415138 TIAM1Q13009 1591 aa14.46□□□□□ -0.09
LINC01888-201ENST00000415138 CD109Q6YHK3 1445 aa14.45□□□□□ -0.1
LINC01888-201ENST00000415138 ABCA9Q8IUA7 1624 aa14.44□□□□□ -0.1
LINC01888-201ENST00000415138 MYO5CQ9NQX4 1742 aa14.44□□□□□ -0.1
LINC01888-201ENST00000415138 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
LINC01888-201ENST00000415138 TEX14Q8IWB6 1497 aa14.43□□□□□ -0.1
LINC01888-201ENST00000415138 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
LINC01888-201ENST00000415138 SUPT6HQ7KZ85 1726 aaKnown RBP14.42□□□□□ -0.1
LINC01888-201ENST00000415138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC01888-201ENST00000415138 MAP3K13O43283 966 aa14.41□□□□□ -0.1
LINC01888-201ENST00000415138 MAGI3Q5TCQ9 1506 aa14.39□□□□□ -0.11
LINC01888-201ENST00000415138 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
LINC01888-201ENST00000415138 LRRC9Q6ZRR7 1453 aa14.38□□□□□ -0.11
LINC01888-201ENST00000415138 DCAF8Q5TAQ9 597 aa14.38□□□□□ -0.11
LINC01888-201ENST00000415138 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
LINC01888-201ENST00000415138 CCNB3Q8WWL7 1395 aa14.37□□□□□ -0.11
LINC01888-201ENST00000415138 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
LINC01888-201ENST00000415138 ITSN2Q9NZM3 1697 aa14.36□□□□□ -0.11
LINC01888-201ENST00000415138 EFCAB2Q5VUJ9 269 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms