RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 CDC42BPBQ9Y5S2 1711 aa17.67■□□□□ 0.42
A1CF-208ENST00000414883 DENND4BO75064 1496 aaPredicted RBP17.66■□□□□ 0.42
A1CF-208ENST00000414883 ZMYM4Q5VZL5 1548 aa17.64■□□□□ 0.41
A1CF-208ENST00000414883 PREX2Q70Z35 1606 aa17.64■□□□□ 0.41
A1CF-208ENST00000414883 CDC42BPAQ5VT25 1732 aa17.64■□□□□ 0.41
A1CF-208ENST00000414883 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
A1CF-208ENST00000414883 POGZQ7Z3K3 1410 aa17.61■□□□□ 0.41
A1CF-208ENST00000414883 SCAPERQ9BY12 1400 aa17.61■□□□□ 0.41
A1CF-208ENST00000414883 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
A1CF-208ENST00000414883 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
A1CF-208ENST00000414883 EFCAB2Q5VUJ9 269 aa17.59■□□□□ 0.41
A1CF-208ENST00000414883 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
A1CF-208ENST00000414883 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
A1CF-208ENST00000414883 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
A1CF-208ENST00000414883 MAGI2Q86UL8 1455 aa17.56■□□□□ 0.4
A1CF-208ENST00000414883 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
A1CF-208ENST00000414883 KDM5CP41229 1560 aa17.55■□□□□ 0.4
A1CF-208ENST00000414883 ABCC1P33527 1531 aa17.55■□□□□ 0.4
A1CF-208ENST00000414883 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
A1CF-208ENST00000414883 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
A1CF-208ENST00000414883 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
A1CF-208ENST00000414883 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
A1CF-208ENST00000414883 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
A1CF-208ENST00000414883 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.4
A1CF-208ENST00000414883 SAMD9LQ8IVG5 1584 aa17.52■□□□□ 0.39
A1CF-208ENST00000414883 MTUS2Q5JR59 1369 aa17.52■□□□□ 0.39
A1CF-208ENST00000414883 TIAM1Q13009 1591 aa17.51■□□□□ 0.39
A1CF-208ENST00000414883 TRAPPC8Q9Y2L5 1435 aa17.5■□□□□ 0.39
A1CF-208ENST00000414883 AFAP1Q8N556 730 aa17.5■□□□□ 0.39
A1CF-208ENST00000414883 HECW2Q9P2P5 1572 aa17.47■□□□□ 0.39
A1CF-208ENST00000414883 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
A1CF-208ENST00000414883 MADDQ8WXG6 1647 aa17.46■□□□□ 0.39
A1CF-208ENST00000414883 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
A1CF-208ENST00000414883 ATP10AO60312 1499 aa17.45■□□□□ 0.38
A1CF-208ENST00000414883 ABCA6Q8N139 1617 aa17.45■□□□□ 0.38
A1CF-208ENST00000414883 SYCP2Q9BX26 1530 aa17.45■□□□□ 0.38
A1CF-208ENST00000414883 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
A1CF-208ENST00000414883 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
A1CF-208ENST00000414883 MAP3K1Q13233 1512 aa17.44■□□□□ 0.38
A1CF-208ENST00000414883 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
A1CF-208ENST00000414883 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
A1CF-208ENST00000414883 NCOA2Q15596 1464 aa17.43■□□□□ 0.38
A1CF-208ENST00000414883 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
A1CF-208ENST00000414883 REREQ9P2R6 1566 aa17.42■□□□□ 0.38
A1CF-208ENST00000414883 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
A1CF-208ENST00000414883 PTPRMP28827 1452 aa17.42■□□□□ 0.38
A1CF-208ENST00000414883 CFDP1Q9UEE9 299 aaPredicted RBP17.4■□□□□ 0.38
A1CF-208ENST00000414883 PPP6R1Q9UPN7 881 aa17.4■□□□□ 0.38
A1CF-208ENST00000414883 ARID4BQ4LE39 1312 aaPredicted RBP17.4■□□□□ 0.38
A1CF-208ENST00000414883 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
A1CF-208ENST00000414883 MBD5Q9P267 1494 aa17.39■□□□□ 0.37
A1CF-208ENST00000414883 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
A1CF-208ENST00000414883 ZNF777Q9ULD5 760 aaPredicted RBP17.39■□□□□ 0.37
A1CF-208ENST00000414883 RIMS1Q86UR5 1692 aaKnown RBP17.39■□□□□ 0.37
A1CF-208ENST00000414883 PLEKHH2Q8IVE3 1493 aa17.38■□□□□ 0.37
A1CF-208ENST00000414883 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
A1CF-208ENST00000414883 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
A1CF-208ENST00000414883 ADRA2BP18089 450 aa17.37■□□□□ 0.37
A1CF-208ENST00000414883 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
A1CF-208ENST00000414883 AGLP35573 1532 aa17.35■□□□□ 0.37
A1CF-208ENST00000414883 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
A1CF-208ENST00000414883 CAMSAP2Q08AD1 1489 aa17.32■□□□□ 0.36
A1CF-208ENST00000414883 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
A1CF-208ENST00000414883 PLXNC1O60486 1568 aa17.31■□□□□ 0.36
A1CF-208ENST00000414883 MLECQ14165 292 aa17.3■□□□□ 0.36
A1CF-208ENST00000414883 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
A1CF-208ENST00000414883 MYT1LQ9UL68 1186 aa17.27■□□□□ 0.36
A1CF-208ENST00000414883 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
A1CF-208ENST00000414883 ADGBQ8N7X0 1667 aa17.26■□□□□ 0.35
A1CF-208ENST00000414883 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
A1CF-208ENST00000414883 MYOM3Q5VTT5 1437 aa17.25■□□□□ 0.35
A1CF-208ENST00000414883 PIAS4Q8N2W9 510 aaPredicted RBP17.25■□□□□ 0.35
A1CF-208ENST00000414883 A2MP01023 1474 aa17.24■□□□□ 0.35
A1CF-208ENST00000414883 LMTK3Q96Q04 1460 aa17.24■□□□□ 0.35
A1CF-208ENST00000414883 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
A1CF-208ENST00000414883 C3P01024 1663 aa17.22■□□□□ 0.35
A1CF-208ENST00000414883 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
A1CF-208ENST00000414883 CEBPAP49715 358 aaPredicted RBP17.19■□□□□ 0.34
A1CF-208ENST00000414883 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
A1CF-208ENST00000414883 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
A1CF-208ENST00000414883 DHX29Q7Z478 1369 aaKnown RBP17.17■□□□□ 0.34
A1CF-208ENST00000414883 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
A1CF-208ENST00000414883 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
A1CF-208ENST00000414883 FGD6Q6ZV73 1430 aa17.15■□□□□ 0.34
A1CF-208ENST00000414883 APLP2Q06481 763 aa17.15■□□□□ 0.34
A1CF-208ENST00000414883 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
A1CF-208ENST00000414883 PREX1Q8TCU6 1659 aa17.15■□□□□ 0.34
A1CF-208ENST00000414883 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
A1CF-208ENST00000414883 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
A1CF-208ENST00000414883 CLTCQ00610 1675 aaKnown RBP17.14■□□□□ 0.33
A1CF-208ENST00000414883 ABCC5O15440 1437 aa17.13■□□□□ 0.33
A1CF-208ENST00000414883 MSH5O43196 834 aa17.12■□□□□ 0.33
A1CF-208ENST00000414883 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
A1CF-208ENST00000414883 TSPY4P0CV99 314 aa17.1■□□□□ 0.33
A1CF-208ENST00000414883 TSPY10P0CW01 314 aa17.1■□□□□ 0.33
A1CF-208ENST00000414883 HSPA2P54652 639 aa17.09■□□□□ 0.33
A1CF-208ENST00000414883 ZMYM3Q14202 1370 aa17.09■□□□□ 0.33
A1CF-208ENST00000414883 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
A1CF-208ENST00000414883 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
A1CF-208ENST00000414883 GGT6Q6P531 493 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms