RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
LINC00330-201ENST00000414562 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.32
LINC00330-201ENST00000414562 PLCH2O75038 1416 aa17.08■□□□□ 0.32
LINC00330-201ENST00000414562 MAP3K4Q9Y6R4 1608 aa17.07■□□□□ 0.32
LINC00330-201ENST00000414562 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
LINC00330-201ENST00000414562 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
LINC00330-201ENST00000414562 CFDP1Q9UEE9 299 aaPredicted RBP17.05■□□□□ 0.32
LINC00330-201ENST00000414562 TSPOAP1O95153 1857 aa17.05■□□□□ 0.32
LINC00330-201ENST00000414562 PTPN23Q9H3S7 1636 aa17.05■□□□□ 0.32
LINC00330-201ENST00000414562 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
LINC00330-201ENST00000414562 ITSN2Q9NZM3 1697 aa17.04■□□□□ 0.32
LINC00330-201ENST00000414562 ZNF777Q9ULD5 760 aaPredicted RBP17.04■□□□□ 0.32
LINC00330-201ENST00000414562 MIA2Q96PC5 1412 aa17.02■□□□□ 0.32
LINC00330-201ENST00000414562 ARHGAP5Q13017 1502 aa17.02■□□□□ 0.32
LINC00330-201ENST00000414562 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.32
LINC00330-201ENST00000414562 ARHGEF12Q9NZN5 1544 aa17.02■□□□□ 0.32
LINC00330-201ENST00000414562 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
LINC00330-201ENST00000414562 CAMSAP2Q08AD1 1489 aa17.01■□□□□ 0.31
LINC00330-201ENST00000414562 PTPRKQ15262 1439 aa17■□□□□ 0.31
LINC00330-201ENST00000414562 ARAP3Q8WWN8 1544 aa16.99■□□□□ 0.31
LINC00330-201ENST00000414562 FANCAO15360 1455 aa16.99■□□□□ 0.31
LINC00330-201ENST00000414562 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC00330-201ENST00000414562 MBD5Q9P267 1494 aa16.97■□□□□ 0.31
LINC00330-201ENST00000414562 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
LINC00330-201ENST00000414562 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
LINC00330-201ENST00000414562 ITGAEP38570 1179 aa16.96■□□□□ 0.3
LINC00330-201ENST00000414562 SYCP2Q9BX26 1530 aa16.95■□□□□ 0.3
LINC00330-201ENST00000414562 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
LINC00330-201ENST00000414562 ABCC5O15440 1437 aa16.94■□□□□ 0.3
LINC00330-201ENST00000414562 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
LINC00330-201ENST00000414562 ABCC1P33527 1531 aa16.94■□□□□ 0.3
LINC00330-201ENST00000414562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.94■□□□□ 0.3
LINC00330-201ENST00000414562 TRAPPC8Q9Y2L5 1435 aa16.93■□□□□ 0.3
LINC00330-201ENST00000414562 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
LINC00330-201ENST00000414562 COL17A1Q9UMD9 1497 aaPredicted RBP16.92■□□□□ 0.3
LINC00330-201ENST00000414562 SCAPERQ9BY12 1400 aa16.91■□□□□ 0.3
LINC00330-201ENST00000414562 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
LINC00330-201ENST00000414562 DAPK1P53355 1430 aa16.9■□□□□ 0.3
LINC00330-201ENST00000414562 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
LINC00330-201ENST00000414562 ADGRL1O94910 1474 aa16.9■□□□□ 0.3
LINC00330-201ENST00000414562 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
LINC00330-201ENST00000414562 NEO1Q92859 1461 aa16.89■□□□□ 0.29
LINC00330-201ENST00000414562 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
LINC00330-201ENST00000414562 CHIC2Q9UKJ5 165 aa16.89■□□□□ 0.29
LINC00330-201ENST00000414562 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
LINC00330-201ENST00000414562 RAPGEF3O95398 923 aa16.87■□□□□ 0.29
LINC00330-201ENST00000414562 CROCC2H7BZ55 1655 aa16.86■□□□□ 0.29
LINC00330-201ENST00000414562 FRMPD1Q5SYB0 1578 aa16.85■□□□□ 0.29
LINC00330-201ENST00000414562 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
LINC00330-201ENST00000414562 PLEKHH2Q8IVE3 1493 aa16.84■□□□□ 0.29
LINC00330-201ENST00000414562 RICTORQ6R327 1708 aa16.84■□□□□ 0.29
LINC00330-201ENST00000414562 CCDC141Q6ZP82 1450 aa16.83■□□□□ 0.29
LINC00330-201ENST00000414562 TEX14Q8IWB6 1497 aa16.83■□□□□ 0.29
LINC00330-201ENST00000414562 POGZQ7Z3K3 1410 aa16.82■□□□□ 0.28
LINC00330-201ENST00000414562 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
LINC00330-201ENST00000414562 C9orf84Q5VXU9 1444 aa16.8■□□□□ 0.28
LINC00330-201ENST00000414562 DENND4BO75064 1496 aaPredicted RBP16.8■□□□□ 0.28
LINC00330-201ENST00000414562 KDM5CP41229 1560 aa16.79■□□□□ 0.28
LINC00330-201ENST00000414562 NCOA1Q15788 1441 aa16.78■□□□□ 0.28
LINC00330-201ENST00000414562 KDM6BO15054 1643 aa16.78■□□□□ 0.28
LINC00330-201ENST00000414562 KIDINS220Q9ULH0 1771 aa16.78■□□□□ 0.28
LINC00330-201ENST00000414562 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.28
LINC00330-201ENST00000414562 SHANK2Q9UPX8 1470 aa16.77■□□□□ 0.28
LINC00330-201ENST00000414562 ZNF518AQ6AHZ1 1483 aa16.77■□□□□ 0.27
LINC00330-201ENST00000414562 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.27
LINC00330-201ENST00000414562 ZFYVE16Q7Z3T8 1539 aa16.77■□□□□ 0.27
LINC00330-201ENST00000414562 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
LINC00330-201ENST00000414562 ADGRL2O95490 1459 aa16.76■□□□□ 0.27
LINC00330-201ENST00000414562 NAIPQ13075 1403 aa16.76■□□□□ 0.27
LINC00330-201ENST00000414562 SPAG9O60271 1321 aaKnown RBP16.76■□□□□ 0.27
LINC00330-201ENST00000414562 TSPY4P0CV99 314 aa16.75■□□□□ 0.27
LINC00330-201ENST00000414562 TSPY10P0CW01 314 aa16.75■□□□□ 0.27
LINC00330-201ENST00000414562 ADGBQ8N7X0 1667 aa16.75■□□□□ 0.27
LINC00330-201ENST00000414562 YEATS2Q9ULM3 1422 aa16.74■□□□□ 0.27
LINC00330-201ENST00000414562 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
LINC00330-201ENST00000414562 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
LINC00330-201ENST00000414562 HFM1A2PYH4 1435 aa16.73■□□□□ 0.27
LINC00330-201ENST00000414562 MLH3Q9UHC1 1453 aa16.73■□□□□ 0.27
LINC00330-201ENST00000414562 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
LINC00330-201ENST00000414562 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
LINC00330-201ENST00000414562 HECW2Q9P2P5 1572 aa16.71■□□□□ 0.27
LINC00330-201ENST00000414562 ZMYM4Q5VZL5 1548 aa16.71■□□□□ 0.27
LINC00330-201ENST00000414562 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
LINC00330-201ENST00000414562 GCC2Q8IWJ2 1684 aa16.7■□□□□ 0.26
LINC00330-201ENST00000414562 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
LINC00330-201ENST00000414562 KIF15Q9NS87 1388 aa16.7■□□□□ 0.26
LINC00330-201ENST00000414562 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
LINC00330-201ENST00000414562 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
LINC00330-201ENST00000414562 SIGLEC1Q9BZZ2 1709 aa16.69■□□□□ 0.26
LINC00330-201ENST00000414562 DIP2CQ9Y2E4 1556 aa16.68■□□□□ 0.26
LINC00330-201ENST00000414562 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
LINC00330-201ENST00000414562 ANKRD50Q9ULJ7 1429 aa16.64■□□□□ 0.25
LINC00330-201ENST00000414562 DUOX2Q9NRD8 1548 aa16.62■□□□□ 0.25
LINC00330-201ENST00000414562 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
LINC00330-201ENST00000414562 A2MP01023 1474 aa16.61■□□□□ 0.25
LINC00330-201ENST00000414562 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
LINC00330-201ENST00000414562 DHX57Q6P158 1386 aaKnown RBP16.61■□□□□ 0.25
LINC00330-201ENST00000414562 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
LINC00330-201ENST00000414562 ATP10AO60312 1499 aa16.59■□□□□ 0.25
LINC00330-201ENST00000414562 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms