RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SUPT6HQ7KZ85 1726 aaKnown RBP25.8■■□□□ 1.72
LINC00398-201ENST00000414407 GPATCH8Q9UKJ3 1502 aaKnown RBP25.79■■□□□ 1.72
LINC00398-201ENST00000414407 PREX2Q70Z35 1606 aa25.78■■□□□ 1.72
LINC00398-201ENST00000414407 NCOA2Q15596 1464 aa25.78■■□□□ 1.72
LINC00398-201ENST00000414407 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
LINC00398-201ENST00000414407 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.71
LINC00398-201ENST00000414407 CDC42BPBQ9Y5S2 1711 aa25.75■■□□□ 1.71
LINC00398-201ENST00000414407 CFDP1Q9UEE9 299 aaPredicted RBP25.72■■□□□ 1.71
LINC00398-201ENST00000414407 ADGRL1O94910 1474 aa25.71■■□□□ 1.71
LINC00398-201ENST00000414407 DENND4BO75064 1496 aaPredicted RBP25.7■■□□□ 1.7
LINC00398-201ENST00000414407 ITSN2Q9NZM3 1697 aa25.69■■□□□ 1.7
LINC00398-201ENST00000414407 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
LINC00398-201ENST00000414407 RAPGEF3O95398 923 aa25.66■■□□□ 1.7
LINC00398-201ENST00000414407 PLEKHH2Q8IVE3 1493 aa25.63■■□□□ 1.69
LINC00398-201ENST00000414407 ABCC1P33527 1531 aa25.63■■□□□ 1.69
LINC00398-201ENST00000414407 POGZQ7Z3K3 1410 aa25.63■■□□□ 1.69
LINC00398-201ENST00000414407 ZNF777Q9ULD5 760 aaPredicted RBP25.62■■□□□ 1.69
LINC00398-201ENST00000414407 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
LINC00398-201ENST00000414407 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
LINC00398-201ENST00000414407 MYOM3Q5VTT5 1437 aa25.61■■□□□ 1.69
LINC00398-201ENST00000414407 SAMD9LQ8IVG5 1584 aa25.61■■□□□ 1.69
LINC00398-201ENST00000414407 RICTORQ6R327 1708 aa25.6■■□□□ 1.69
LINC00398-201ENST00000414407 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
LINC00398-201ENST00000414407 ZNF518AQ6AHZ1 1483 aa25.59■■□□□ 1.69
LINC00398-201ENST00000414407 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
LINC00398-201ENST00000414407 ZMYM4Q5VZL5 1548 aa25.57■■□□□ 1.68
LINC00398-201ENST00000414407 MAGI2Q86UL8 1455 aa25.55■■□□□ 1.68
LINC00398-201ENST00000414407 ZNF644Q9H582 1327 aaPredicted RBP25.54■■□□□ 1.68
LINC00398-201ENST00000414407 KDM5CP41229 1560 aa25.53■■□□□ 1.68
LINC00398-201ENST00000414407 AFAP1Q8N556 730 aa25.53■■□□□ 1.68
LINC00398-201ENST00000414407 TRAPPC8Q9Y2L5 1435 aa25.53■■□□□ 1.68
LINC00398-201ENST00000414407 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
LINC00398-201ENST00000414407 HNRNPMP52272 730 aaKnown RBP eCLIP25.52■■□□□ 1.68
LINC00398-201ENST00000414407 CAMSAP2Q08AD1 1489 aa25.51■■□□□ 1.67
LINC00398-201ENST00000414407 RSPH4AQ5TD94 716 aa25.5■■□□□ 1.67
LINC00398-201ENST00000414407 MBD5Q9P267 1494 aa25.5■■□□□ 1.67
LINC00398-201ENST00000414407 MLH3Q9UHC1 1453 aa25.47■■□□□ 1.67
LINC00398-201ENST00000414407 FGD6Q6ZV73 1430 aa25.47■■□□□ 1.67
LINC00398-201ENST00000414407 ZFYVE16Q7Z3T8 1539 aa25.45■■□□□ 1.66
LINC00398-201ENST00000414407 ARHGEF40Q8TER5 1519 aa25.44■■□□□ 1.66
LINC00398-201ENST00000414407 HECW2Q9P2P5 1572 aa25.43■■□□□ 1.66
LINC00398-201ENST00000414407 TCOF1Q13428 1488 aaKnown RBP25.42■■□□□ 1.66
LINC00398-201ENST00000414407 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
LINC00398-201ENST00000414407 ARHGEF5Q12774 1597 aa25.42■■□□□ 1.66
LINC00398-201ENST00000414407 PTPN23Q9H3S7 1636 aa25.41■■□□□ 1.66
LINC00398-201ENST00000414407 CCDC141Q6ZP82 1450 aa25.41■■□□□ 1.66
LINC00398-201ENST00000414407 SPAG9O60271 1321 aaKnown RBP25.41■■□□□ 1.66
LINC00398-201ENST00000414407 YEATS2Q9ULM3 1422 aa25.41■■□□□ 1.66
LINC00398-201ENST00000414407 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
LINC00398-201ENST00000414407 ATP10AO60312 1499 aa25.37■■□□□ 1.65
LINC00398-201ENST00000414407 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
LINC00398-201ENST00000414407 TSPY4P0CV99 314 aa25.35■■□□□ 1.65
LINC00398-201ENST00000414407 TSPY10P0CW01 314 aa25.35■■□□□ 1.65
LINC00398-201ENST00000414407 KIDINS220Q9ULH0 1771 aa25.35■■□□□ 1.65
LINC00398-201ENST00000414407 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
LINC00398-201ENST00000414407 ATP7AQ04656 1500 aa25.34■■□□□ 1.65
LINC00398-201ENST00000414407 C9orf84Q5VXU9 1444 aa25.33■■□□□ 1.65
LINC00398-201ENST00000414407 DIP2CQ9Y2E4 1556 aa25.32■■□□□ 1.64
LINC00398-201ENST00000414407 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
LINC00398-201ENST00000414407 ABCA6Q8N139 1617 aa25.3■■□□□ 1.64
LINC00398-201ENST00000414407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.3■■□□□ 1.64
LINC00398-201ENST00000414407 ABCC5O15440 1437 aa25.29■■□□□ 1.64
LINC00398-201ENST00000414407 MAST1Q9Y2H9 1570 aa25.28■■□□□ 1.64
LINC00398-201ENST00000414407 SHANK2Q9UPX8 1470 aa25.28■■□□□ 1.64
LINC00398-201ENST00000414407 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
LINC00398-201ENST00000414407 FAM50AQ14320 339 aaKnown RBP25.27■■□□□ 1.64
LINC00398-201ENST00000414407 DAPK1P53355 1430 aa25.27■■□□□ 1.64
LINC00398-201ENST00000414407 ARID4BQ4LE39 1312 aaPredicted RBP25.25■■□□□ 1.63
LINC00398-201ENST00000414407 RRBP1Q9P2E9 1410 aaKnown RBP25.25■■□□□ 1.63
LINC00398-201ENST00000414407 AGLP35573 1532 aa25.22■■□□□ 1.63
LINC00398-201ENST00000414407 A2MP01023 1474 aa25.21■■□□□ 1.63
LINC00398-201ENST00000414407 CROCC2H7BZ55 1655 aa25.21■■□□□ 1.63
LINC00398-201ENST00000414407 ADGBQ8N7X0 1667 aa25.2■■□□□ 1.63
LINC00398-201ENST00000414407 SIGLEC1Q9BZZ2 1709 aa25.2■■□□□ 1.62
LINC00398-201ENST00000414407 DHX29Q7Z478 1369 aaKnown RBP25.18■■□□□ 1.62
LINC00398-201ENST00000414407 PLXNC1O60486 1568 aa25.18■■□□□ 1.62
LINC00398-201ENST00000414407 KDM4FA0A1W2PPD8 638 aa25.18■■□□□ 1.62
LINC00398-201ENST00000414407 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
LINC00398-201ENST00000414407 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
LINC00398-201ENST00000414407 ADGRL2O95490 1459 aa25.13■■□□□ 1.61
LINC00398-201ENST00000414407 ADAMTSL3P82987 1691 aa25.12■■□□□ 1.61
LINC00398-201ENST00000414407 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
LINC00398-201ENST00000414407 KIF15Q9NS87 1388 aa25.1■■□□□ 1.61
LINC00398-201ENST00000414407 CHIC2Q9UKJ5 165 aa25.1■■□□□ 1.61
LINC00398-201ENST00000414407 PTPRKQ15262 1439 aa25.1■■□□□ 1.61
LINC00398-201ENST00000414407 DUOX2Q9NRD8 1548 aa25.09■■□□□ 1.61
LINC00398-201ENST00000414407 ROCK1Q13464 1354 aa25.08■■□□□ 1.61
LINC00398-201ENST00000414407 MLECQ14165 292 aa25.08■■□□□ 1.61
LINC00398-201ENST00000414407 RRP7BPQ9NSQ0 103 aa25.07■■□□□ 1.6
LINC00398-201ENST00000414407 PPP6R1Q9UPN7 881 aa25.05■■□□□ 1.6
LINC00398-201ENST00000414407 ERBINQ96RT1 1412 aa25.04■■□□□ 1.6
LINC00398-201ENST00000414407 KIF3BO15066 747 aa25.03■■□□□ 1.6
LINC00398-201ENST00000414407 EIF2AK4Q9P2K8 1649 aaKnown RBP25.02■■□□□ 1.6
LINC00398-201ENST00000414407 ITGAEP38570 1179 aa25.02■■□□□ 1.6
LINC00398-201ENST00000414407 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
LINC00398-201ENST00000414407 GGT6Q6P531 493 aa25■■□□□ 1.59
LINC00398-201ENST00000414407 CNTLNQ9NXG0 1405 aa24.98■■□□□ 1.59
LINC00398-201ENST00000414407 FER1L4A9Z1Z3 1794 aa24.98■■□□□ 1.59
LINC00398-201ENST00000414407 PTPRMP28827 1452 aa24.97■■□□□ 1.59
LINC00398-201ENST00000414407 ESF1Q9H501 851 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms