RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 BCORL1Q5H9F3 1711 aa33.42■■■□□ 2.94
LMBR1-203ENST00000414218 HECW2Q9P2P5 1572 aa33.4■■■□□ 2.94
LMBR1-203ENST00000414218 POGZQ7Z3K3 1410 aa33.4■■■□□ 2.94
LMBR1-203ENST00000414218 FYCO1Q9BQS8 1478 aa33.39■■■□□ 2.94
LMBR1-203ENST00000414218 YEATS2Q9ULM3 1422 aa33.39■■■□□ 2.94
LMBR1-203ENST00000414218 ZFYVE16Q7Z3T8 1539 aa33.38■■■□□ 2.93
LMBR1-203ENST00000414218 ARHGAP5Q13017 1502 aa33.38■■■□□ 2.93
LMBR1-203ENST00000414218 MAGI2Q86UL8 1455 aa33.37■■■□□ 2.93
LMBR1-203ENST00000414218 PTPRMP28827 1452 aa33.35■■■□□ 2.93
LMBR1-203ENST00000414218 MADDQ8WXG6 1647 aa33.31■■■□□ 2.92
LMBR1-203ENST00000414218 CDC42BPBQ9Y5S2 1711 aa33.31■■■□□ 2.92
LMBR1-203ENST00000414218 SIGLEC1Q9BZZ2 1709 aa33.28■■■□□ 2.92
LMBR1-203ENST00000414218 AFAP1Q8N556 730 aa33.26■■■□□ 2.91
LMBR1-203ENST00000414218 PREX2Q70Z35 1606 aa33.25■■■□□ 2.91
LMBR1-203ENST00000414218 ZNF518AQ6AHZ1 1483 aa33.24■■■□□ 2.91
LMBR1-203ENST00000414218 ATP10AO60312 1499 aa33.22■■■□□ 2.91
LMBR1-203ENST00000414218 RIMS1Q86UR5 1692 aaKnown RBP33.22■■■□□ 2.91
LMBR1-203ENST00000414218 MLECQ14165 292 aa33.2■■■□□ 2.91
LMBR1-203ENST00000414218 CDC42BPAQ5VT25 1732 aa33.19■■■□□ 2.9
LMBR1-203ENST00000414218 KDM5CP41229 1560 aa33.18■■■□□ 2.9
LMBR1-203ENST00000414218 MYT1LQ9UL68 1186 aa33.18■■■□□ 2.9
LMBR1-203ENST00000414218 CEP162Q5TB80 1403 aa33.17■■■□□ 2.9
LMBR1-203ENST00000414218 C9orf84Q5VXU9 1444 aa33.16■■■□□ 2.9
LMBR1-203ENST00000414218 ABCC1P33527 1531 aa33.14■■■□□ 2.9
LMBR1-203ENST00000414218 ARHGEF12Q9NZN5 1544 aa33.14■■■□□ 2.9
LMBR1-203ENST00000414218 TRAPPC8Q9Y2L5 1435 aa33.13■■■□□ 2.89
LMBR1-203ENST00000414218 PLPPR3Q6T4P5 718 aa33.11■■■□□ 2.89
LMBR1-203ENST00000414218 ITSN2Q9NZM3 1697 aa33.1■■■□□ 2.89
LMBR1-203ENST00000414218 ZNF777Q9ULD5 760 aaPredicted RBP33.1■■■□□ 2.89
LMBR1-203ENST00000414218 GPATCH8Q9UKJ3 1502 aaKnown RBP33.09■■■□□ 2.89
LMBR1-203ENST00000414218 MTUS2Q5JR59 1369 aa33.09■■■□□ 2.89
LMBR1-203ENST00000414218 MLH3Q9UHC1 1453 aa33.07■■■□□ 2.88
LMBR1-203ENST00000414218 FER1L4A9Z1Z3 1794 aa33.07■■■□□ 2.88
LMBR1-203ENST00000414218 DIP2CQ9Y2E4 1556 aa33.06■■■□□ 2.88
LMBR1-203ENST00000414218 LOC105371045A0A1W2PR82 267 aa33.05■■■□□ 2.88
LMBR1-203ENST00000414218 SAMD9LQ8IVG5 1584 aa33.03■■■□□ 2.88
LMBR1-203ENST00000414218 ABCA6Q8N139 1617 aa33.02■■■□□ 2.88
LMBR1-203ENST00000414218 CCNB3Q8WWL7 1395 aa33.02■■■□□ 2.88
LMBR1-203ENST00000414218 CFDP1Q9UEE9 299 aaPredicted RBP33■■■□□ 2.87
LMBR1-203ENST00000414218 LMTK3Q96Q04 1460 aa32.99■■■□□ 2.87
LMBR1-203ENST00000414218 HNRNPMP52272 730 aaKnown RBP eCLIP32.98■■■□□ 2.871e-6■■■■□ 20.7
LMBR1-203ENST00000414218 REREQ9P2R6 1566 aa32.97■■■□□ 2.87
LMBR1-203ENST00000414218 KIDINS220Q9ULH0 1771 aa32.97■■■□□ 2.87
LMBR1-203ENST00000414218 SYCP2Q9BX26 1530 aa32.97■■■□□ 2.87
LMBR1-203ENST00000414218 EHBP1L1Q8N3D4 1523 aa32.94■■■□□ 2.86
LMBR1-203ENST00000414218 SPAG9O60271 1321 aaKnown RBP32.9■■■□□ 2.86
LMBR1-203ENST00000414218 KIAA1107Q9UPP5 1409 aa32.9■■■□□ 2.86
LMBR1-203ENST00000414218 PLEKHH2Q8IVE3 1493 aa32.9■■■□□ 2.86
LMBR1-203ENST00000414218 TIAM1Q13009 1591 aa32.89■■■□□ 2.86
LMBR1-203ENST00000414218 CEBPAP49715 358 aaPredicted RBP32.89■■■□□ 2.86
LMBR1-203ENST00000414218 ILDR1Q86SU0 546 aaPredicted RBP32.89■■■□□ 2.86
LMBR1-203ENST00000414218 AGLP35573 1532 aa32.88■■■□□ 2.85
LMBR1-203ENST00000414218 HSPA2P54652 639 aa32.87■■■□□ 2.85
LMBR1-203ENST00000414218 ZNF644Q9H582 1327 aaPredicted RBP32.85■■■□□ 2.85
LMBR1-203ENST00000414218 ATP7AQ04656 1500 aa32.8■■■□□ 2.84
LMBR1-203ENST00000414218 VPS8Q8N3P4 1428 aa32.79■■■□□ 2.84
LMBR1-203ENST00000414218 ESF1Q9H501 851 aaKnown RBP32.78■■■□□ 2.84
LMBR1-203ENST00000414218 INO80Q9ULG1 1556 aaPredicted RBP32.77■■■□□ 2.84
LMBR1-203ENST00000414218 SUPT6HQ7KZ85 1726 aaKnown RBP32.77■■■□□ 2.84
LMBR1-203ENST00000414218 NCOA2Q15596 1464 aa32.76■■■□□ 2.84
LMBR1-203ENST00000414218 PREX1Q8TCU6 1659 aa32.74■■■□□ 2.83
LMBR1-203ENST00000414218 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
LMBR1-203ENST00000414218 C3P01024 1663 aa32.72■■■□□ 2.83
LMBR1-203ENST00000414218 A2MP01023 1474 aa32.7■■■□□ 2.83
LMBR1-203ENST00000414218 SETD1BQ9UPS6 1966 aaKnown RBP32.69■■■□□ 2.82
LMBR1-203ENST00000414218 CNTLNQ9NXG0 1405 aa32.67■■■□□ 2.82
LMBR1-203ENST00000414218 LRRC9Q6ZRR7 1453 aa32.67■■■□□ 2.82
LMBR1-203ENST00000414218 PLXNC1O60486 1568 aa32.66■■■□□ 2.82
LMBR1-203ENST00000414218 CAMSAP2Q08AD1 1489 aa32.64■■■□□ 2.82
LMBR1-203ENST00000414218 UHRF1BP1Q6BDS2 1440 aa32.64■■■□□ 2.82
LMBR1-203ENST00000414218 ADGBQ8N7X0 1667 aa32.62■■■□□ 2.81
LMBR1-203ENST00000414218 KANK4Q5T7N3 995 aaPredicted RBP32.61■■■□□ 2.81
LMBR1-203ENST00000414218 RTEL1-TNFRSF6BF6WH68 1400 aa32.6■■■□□ 2.81
LMBR1-203ENST00000414218 GGT6Q6P531 493 aa32.59■■■□□ 2.81
LMBR1-203ENST00000414218 MAP3K1Q13233 1512 aa32.58■■■□□ 2.81
LMBR1-203ENST00000414218 CCDC141Q6ZP82 1450 aa32.58■■■□□ 2.81
LMBR1-203ENST00000414218 MROH2AA6NES4 1674 aa32.58■■■□□ 2.81
LMBR1-203ENST00000414218 ZMYM3Q14202 1370 aa32.57■■■□□ 2.8
LMBR1-203ENST00000414218 RSPH4AQ5TD94 716 aa32.56■■■□□ 2.8
LMBR1-203ENST00000414218 CLTCQ00610 1675 aaKnown RBP32.54■■■□□ 2.8
LMBR1-203ENST00000414218 DHX29Q7Z478 1369 aaKnown RBP32.52■■■□□ 2.8
LMBR1-203ENST00000414218 FBXO41Q8TF61 875 aa32.51■■■□□ 2.79
LMBR1-203ENST00000414218 STRCQ7RTU9 1775 aa32.5■■■□□ 2.79
LMBR1-203ENST00000414218 ARHGEF5Q12774 1597 aa32.49■■■□□ 2.79
LMBR1-203ENST00000414218 NPATQ14207 1427 aa32.48■■■□□ 2.79
LMBR1-203ENST00000414218 PPP6R1Q9UPN7 881 aa32.47■■■□□ 2.79
LMBR1-203ENST00000414218 TSPY4P0CV99 314 aa32.46■■■□□ 2.79
LMBR1-203ENST00000414218 TSPY10P0CW01 314 aa32.46■■■□□ 2.79
LMBR1-203ENST00000414218 KIF3BO15066 747 aa32.44■■■□□ 2.78
LMBR1-203ENST00000414218 APLP2Q06481 763 aa32.43■■■□□ 2.78
LMBR1-203ENST00000414218 DMRT2Q9Y5R5 561 aa32.43■■■□□ 2.78
LMBR1-203ENST00000414218 MYOM3Q5VTT5 1437 aa32.43■■■□□ 2.78
LMBR1-203ENST00000414218 PTPRKQ15262 1439 aa32.4■■■□□ 2.78
LMBR1-203ENST00000414218 MIA2Q96PC5 1412 aa32.39■■■□□ 2.78
LMBR1-203ENST00000414218 CERKQ8TCT0 537 aa32.35■■■□□ 2.77
LMBR1-203ENST00000414218 MAST1Q9Y2H9 1570 aa32.32■■■□□ 2.77
LMBR1-203ENST00000414218 NCOA1Q15788 1441 aa32.32■■■□□ 2.76
LMBR1-203ENST00000414218 PTPRTO14522 1441 aa32.31■■■□□ 2.76
LMBR1-203ENST00000414218 CAMSAP1Q5T5Y3 1602 aa32.3■■■□□ 2.76
LMBR1-203ENST00000414218 MYO3AQ8NEV4 1616 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms