RNA–Protein interactions for RNA: ENST00000412996.1

AC004870.3-202, humanhuman

TSL 3 BASIC

Gene AC004870.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004870.3-202ENST00000412996 POTEBQ6S5H4 581 aa13.24□□□□□ -0.29
AC004870.3-202ENST00000412996 HS3ST6Q96QI5 342 aa13.23□□□□□ -0.29
AC004870.3-202ENST00000412996 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
AC004870.3-202ENST00000412996 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
AC004870.3-202ENST00000412996 ERBB3P21860 1342 aa13.13□□□□□ -0.31
AC004870.3-202ENST00000412996 SPNS2Q8IVW8 549 aa13.12□□□□□ -0.31
AC004870.3-202ENST00000412996 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
AC004870.3-202ENST00000412996 PPP1R37O75864 691 aa13.11□□□□□ -0.31
AC004870.3-202ENST00000412996 KRTAP3-3Q9BYR6 98 aa13.11□□□□□ -0.31
AC004870.3-202ENST00000412996 KRTAP3-2Q9BYR7 98 aa13.11□□□□□ -0.31
AC004870.3-202ENST00000412996 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
AC004870.3-202ENST00000412996 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
AC004870.3-202ENST00000412996 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
AC004870.3-202ENST00000412996 KIF3CO14782 793 aa13.08□□□□□ -0.32
AC004870.3-202ENST00000412996 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
AC004870.3-202ENST00000412996 MMRN1Q13201 1228 aa13.06□□□□□ -0.32
AC004870.3-202ENST00000412996 ARSIQ5FYB1 569 aa13.06□□□□□ -0.32
AC004870.3-202ENST00000412996 VARS2Q5ST30 1063 aaKnown RBP13.05□□□□□ -0.32
AC004870.3-202ENST00000412996 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
AC004870.3-202ENST00000412996 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
AC004870.3-202ENST00000412996 NKX1-1Q15270 411 aaPredicted RBP12.95□□□□□ -0.34
AC004870.3-202ENST00000412996 ZNF687Q8N1G0 1237 aa12.95□□□□□ -0.34
AC004870.3-202ENST00000412996 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
AC004870.3-202ENST00000412996 DNAJC5Q9H3Z4 198 aa12.93□□□□□ -0.34
AC004870.3-202ENST00000412996 SLC34A2O95436 690 aa12.91□□□□□ -0.34
AC004870.3-202ENST00000412996 NUDT7P0C024 238 aa12.91□□□□□ -0.34
AC004870.3-202ENST00000412996 PCDHGA4Q9Y5G9 962 aa12.91□□□□□ -0.34
AC004870.3-202ENST00000412996 GPHNQ9NQX3 736 aaPredicted RBP12.86□□□□□ -0.35
AC004870.3-202ENST00000412996 FOXK1P85037 733 aa12.85□□□□□ -0.35
AC004870.3-202ENST00000412996 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
AC004870.3-202ENST00000412996 RYDENQ9NUL5 291 aaKnown RBP12.84□□□□□ -0.35
AC004870.3-202ENST00000412996 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
AC004870.3-202ENST00000412996 DSG2Q14126 1118 aa12.82□□□□□ -0.36
AC004870.3-202ENST00000412996 DCAF8L2P0C7V8 631 aa12.81□□□□□ -0.36
AC004870.3-202ENST00000412996 PTCD2Q8WV60 388 aaKnown RBP12.8□□□□□ -0.36
AC004870.3-202ENST00000412996 ANKRD13DQ6ZTN6 518 aa12.78□□□□□ -0.36
AC004870.3-202ENST00000412996 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
AC004870.3-202ENST00000412996 KDM4FA0A1W2PPD8 638 aa12.75□□□□□ -0.37
AC004870.3-202ENST00000412996 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
AC004870.3-202ENST00000412996 CRISPLD2Q9H0B8 497 aa12.73□□□□□ -0.37
AC004870.3-202ENST00000412996 MYT1LQ9UL68 1186 aa12.73□□□□□ -0.37
AC004870.3-202ENST00000412996 AXIN2Q9Y2T1 843 aa12.73□□□□□ -0.37
AC004870.3-202ENST00000412996 LSM11P83369 360 aaKnown RBP eCLIP12.72□□□□□ -0.37
AC004870.3-202ENST00000412996 RNF166Q96A37 237 aaPredicted RBP12.72□□□□□ -0.37
AC004870.3-202ENST00000412996 TBC1D12O60347 775 aa12.7□□□□□ -0.38
AC004870.3-202ENST00000412996 PBX2P40425 430 aa12.7□□□□□ -0.38
AC004870.3-202ENST00000412996 NCKAP5LQ9HCH0 1330 aa12.69□□□□□ -0.38
AC004870.3-202ENST00000412996 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
AC004870.3-202ENST00000412996 PDE4AP27815 886 aa12.67□□□□□ -0.38
AC004870.3-202ENST00000412996 PPP1R15BQ5SWA1 713 aa12.67□□□□□ -0.38
AC004870.3-202ENST00000412996 PTGER2P43116 358 aa12.66□□□□□ -0.38
AC004870.3-202ENST00000412996 UPF1Q92900 1129 aaKnown RBP eCLIP12.66□□□□□ -0.38
AC004870.3-202ENST00000412996 OXER1Q8TDS5 423 aa12.65□□□□□ -0.38
AC004870.3-202ENST00000412996 ARHGAP33O14559 1287 aa12.63□□□□□ -0.39
AC004870.3-202ENST00000412996 LARP6Q9BRS8 491 aaKnown RBP12.62□□□□□ -0.39
AC004870.3-202ENST00000412996 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
AC004870.3-202ENST00000412996 PSEN2P49810 448 aa12.58□□□□□ -0.4
AC004870.3-202ENST00000412996 DDX27Q96GQ7 796 aaKnown RBP12.57□□□□□ -0.4
AC004870.3-202ENST00000412996 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
AC004870.3-202ENST00000412996 ADGRD1Q6QNK2 874 aa12.56□□□□□ -0.4
AC004870.3-202ENST00000412996 CADPS2Q86UW7 1296 aa12.54□□□□□ -0.4
AC004870.3-202ENST00000412996 MFSD10Q14728 455 aa12.53□□□□□ -0.4
AC004870.3-202ENST00000412996 ZNF454Q8N9F8 522 aa12.52□□□□□ -0.41
AC004870.3-202ENST00000412996 TK2O00142 265 aa12.5□□□□□ -0.41
AC004870.3-202ENST00000412996 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
AC004870.3-202ENST00000412996 EVI5O60447 810 aa12.49□□□□□ -0.41
AC004870.3-202ENST00000412996 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
AC004870.3-202ENST00000412996 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
AC004870.3-202ENST00000412996 MAP3K9P80192 1104 aa12.47□□□□□ -0.41
AC004870.3-202ENST00000412996 EMILIN3Q9NT22 766 aa12.47□□□□□ -0.41
AC004870.3-202ENST00000412996 HRO43593 1189 aa12.46□□□□□ -0.41
AC004870.3-202ENST00000412996 FOSBP53539 338 aa12.46□□□□□ -0.41
AC004870.3-202ENST00000412996 KCNH8Q96L42 1107 aa12.46□□□□□ -0.41
AC004870.3-202ENST00000412996 BCL2L12Q9HB09 334 aa12.44□□□□□ -0.42
AC004870.3-202ENST00000412996 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
AC004870.3-202ENST00000412996 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
AC004870.3-202ENST00000412996 VPS9D1Q9Y2B5 631 aa12.41□□□□□ -0.42
AC004870.3-202ENST00000412996 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
AC004870.3-202ENST00000412996 RTN4Q9NQC3 1192 aaKnown RBP12.4□□□□□ -0.42
AC004870.3-202ENST00000412996 PTPREP23469 700 aa12.39□□□□□ -0.43
AC004870.3-202ENST00000412996 ZDHHC16Q969W1 377 aa12.39□□□□□ -0.43
AC004870.3-202ENST00000412996 ADAM33Q9BZ11 813 aa12.38□□□□□ -0.43
AC004870.3-202ENST00000412996 HCSTQ9UBK5 93 aa12.38□□□□□ -0.43
AC004870.3-202ENST00000412996 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
AC004870.3-202ENST00000412996 KCTD12Q96CX2 325 aaKnown RBP12.35□□□□□ -0.43
AC004870.3-202ENST00000412996 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
AC004870.3-202ENST00000412996 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
AC004870.3-202ENST00000412996 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
AC004870.3-202ENST00000412996 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
AC004870.3-202ENST00000412996 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
AC004870.3-202ENST00000412996 DPYSL4O14531 572 aa12.31□□□□□ -0.44
AC004870.3-202ENST00000412996 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
AC004870.3-202ENST00000412996 PHF14O94880 888 aa12.27□□□□□ -0.45
AC004870.3-202ENST00000412996 PLA2G2EQ9NZK7 142 aa12.27□□□□□ -0.45
AC004870.3-202ENST00000412996 TYW1BQ6NUM6 668 aa12.26□□□□□ -0.45
AC004870.3-202ENST00000412996 PAXIP1Q6ZW49 1069 aaPredicted RBP12.26□□□□□ -0.45
AC004870.3-202ENST00000412996 CFAP44Q96MT7 982 aa12.26□□□□□ -0.45
AC004870.3-202ENST00000412996 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
AC004870.3-202ENST00000412996 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
AC004870.3-202ENST00000412996 COL9A1P20849 921 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms