RNA–Protein interactions for RNA: ENST00000412575.1

SYN3-203, Transcript of synapsin III, humanhuman

TSL 5

Gene SYN3, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-203ENST00000412575 CDC42BPBQ9Y5S2 1711 aa11.22□□□□□ -0.61
SYN3-203ENST00000412575 PREX2Q70Z35 1606 aa11.21□□□□□ -0.61
SYN3-203ENST00000412575 FANCAO15360 1455 aa11.21□□□□□ -0.61
SYN3-203ENST00000412575 MYOM3Q5VTT5 1437 aa11.21□□□□□ -0.61
SYN3-203ENST00000412575 TSPOAP1O95153 1857 aa11.21□□□□□ -0.62
SYN3-203ENST00000412575 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
SYN3-203ENST00000412575 KIAA1107Q9UPP5 1409 aa11.19□□□□□ -0.62
SYN3-203ENST00000412575 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
SYN3-203ENST00000412575 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
SYN3-203ENST00000412575 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
SYN3-203ENST00000412575 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
SYN3-203ENST00000412575 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
SYN3-203ENST00000412575 FGD6Q6ZV73 1430 aa11.17□□□□□ -0.62
SYN3-203ENST00000412575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
SYN3-203ENST00000412575 PPARGC1BQ86YN6 1023 aaKnown RBP11.16□□□□□ -0.62
SYN3-203ENST00000412575 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
SYN3-203ENST00000412575 ADGRL1O94910 1474 aa11.15□□□□□ -0.62
SYN3-203ENST00000412575 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
SYN3-203ENST00000412575 SCAPERQ9BY12 1400 aa11.15□□□□□ -0.62
SYN3-203ENST00000412575 ZNF644Q9H582 1327 aaPredicted RBP11.14□□□□□ -0.63
SYN3-203ENST00000412575 DENND4BO75064 1496 aaPredicted RBP11.14□□□□□ -0.63
SYN3-203ENST00000412575 MBD5Q9P267 1494 aa11.14□□□□□ -0.63
SYN3-203ENST00000412575 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
SYN3-203ENST00000412575 SAMD9LQ8IVG5 1584 aa11.14□□□□□ -0.63
SYN3-203ENST00000412575 ABCC1P33527 1531 aa11.14□□□□□ -0.63
SYN3-203ENST00000412575 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
SYN3-203ENST00000412575 RRBP1Q9P2E9 1410 aaKnown RBP11.13□□□□□ -0.63
SYN3-203ENST00000412575 HNRNPMP52272 730 aaKnown RBP eCLIP11.12□□□□□ -0.63
SYN3-203ENST00000412575 CAMSAP2Q08AD1 1489 aa11.12□□□□□ -0.63
SYN3-203ENST00000412575 ZNF518AQ6AHZ1 1483 aa11.12□□□□□ -0.63
SYN3-203ENST00000412575 POGZQ7Z3K3 1410 aa11.11□□□□□ -0.63
SYN3-203ENST00000412575 PTPN23Q9H3S7 1636 aa11.11□□□□□ -0.63
SYN3-203ENST00000412575 RAPGEF3O95398 923 aa11.11□□□□□ -0.63
SYN3-203ENST00000412575 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
SYN3-203ENST00000412575 TRAPPC8Q9Y2L5 1435 aa11.1□□□□□ -0.63
SYN3-203ENST00000412575 KDM6BO15054 1643 aa11.1□□□□□ -0.63
SYN3-203ENST00000412575 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
SYN3-203ENST00000412575 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 KDM5CP41229 1560 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 MAGI2Q86UL8 1455 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 ZMYM4Q5VZL5 1548 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 SYCP2Q9BX26 1530 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 RTEL1-TNFRSF6BF6WH68 1400 aa11.09□□□□□ -0.63
SYN3-203ENST00000412575 FRMPD1Q5SYB0 1578 aa11.08□□□□□ -0.64
SYN3-203ENST00000412575 MLH3Q9UHC1 1453 aa11.08□□□□□ -0.64
SYN3-203ENST00000412575 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
SYN3-203ENST00000412575 TSPY4P0CV99 314 aa11.07□□□□□ -0.64
SYN3-203ENST00000412575 TSPY10P0CW01 314 aa11.07□□□□□ -0.64
SYN3-203ENST00000412575 ABCC5O15440 1437 aa11.07□□□□□ -0.64
SYN3-203ENST00000412575 FAM50AQ14320 339 aaKnown RBP11.06□□□□□ -0.64
SYN3-203ENST00000412575 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
SYN3-203ENST00000412575 DAPK1P53355 1430 aa11.05□□□□□ -0.64
SYN3-203ENST00000412575 DNMT1P26358 1616 aaKnown RBP11.05□□□□□ -0.64
SYN3-203ENST00000412575 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
SYN3-203ENST00000412575 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
SYN3-203ENST00000412575 KIDINS220Q9ULH0 1771 aa11.03□□□□□ -0.64
SYN3-203ENST00000412575 HECW2Q9P2P5 1572 aa11.02□□□□□ -0.65
SYN3-203ENST00000412575 INO80Q9ULG1 1556 aaPredicted RBP11.02□□□□□ -0.65
SYN3-203ENST00000412575 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
SYN3-203ENST00000412575 PTPRKQ15262 1439 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 ATP10AO60312 1499 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 ATP7AQ04656 1500 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 YEATS2Q9ULM3 1422 aa11.01□□□□□ -0.65
SYN3-203ENST00000412575 ZFYVE16Q7Z3T8 1539 aa11□□□□□ -0.65
SYN3-203ENST00000412575 CROCC2H7BZ55 1655 aa11□□□□□ -0.65
SYN3-203ENST00000412575 REREQ9P2R6 1566 aa10.99□□□□□ -0.65
SYN3-203ENST00000412575 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
SYN3-203ENST00000412575 ANKRD30AQ9BXX3 1397 aa10.99□□□□□ -0.65
SYN3-203ENST00000412575 ARHGEF40Q8TER5 1519 aa10.99□□□□□ -0.65
SYN3-203ENST00000412575 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
SYN3-203ENST00000412575 DIP2CQ9Y2E4 1556 aa10.98□□□□□ -0.65
SYN3-203ENST00000412575 CHIC2Q9UKJ5 165 aa10.97□□□□□ -0.65
SYN3-203ENST00000412575 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
SYN3-203ENST00000412575 ABCA6Q8N139 1617 aa10.96□□□□□ -0.65
SYN3-203ENST00000412575 AGLP35573 1532 aa10.96□□□□□ -0.65
SYN3-203ENST00000412575 A2MP01023 1474 aa10.96□□□□□ -0.65
SYN3-203ENST00000412575 TRIM26Q12899 539 aaPredicted RBP10.96□□□□□ -0.65
SYN3-203ENST00000412575 ADGBQ8N7X0 1667 aa10.95□□□□□ -0.66
SYN3-203ENST00000412575 DUOX2Q9NRD8 1548 aa10.95□□□□□ -0.66
SYN3-203ENST00000412575 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
SYN3-203ENST00000412575 RRP7BPQ9NSQ0 103 aa10.95□□□□□ -0.66
SYN3-203ENST00000412575 ITGAEP38570 1179 aa10.94□□□□□ -0.66
SYN3-203ENST00000412575 PPP6R1Q9UPN7 881 aa10.94□□□□□ -0.66
SYN3-203ENST00000412575 HFM1A2PYH4 1435 aa10.92□□□□□ -0.66
SYN3-203ENST00000412575 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
SYN3-203ENST00000412575 BCORL1Q5H9F3 1711 aa10.92□□□□□ -0.66
SYN3-203ENST00000412575 NAIPQ13075 1403 aa10.92□□□□□ -0.66
SYN3-203ENST00000412575 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
SYN3-203ENST00000412575 HRCP23327 699 aa10.91□□□□□ -0.66
SYN3-203ENST00000412575 ACIN1Q9UKV3 1341 aaKnown RBP10.9□□□□□ -0.66
SYN3-203ENST00000412575 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
SYN3-203ENST00000412575 SIGLEC1Q9BZZ2 1709 aa10.89□□□□□ -0.67
SYN3-203ENST00000412575 KIF3BO15066 747 aa10.89□□□□□ -0.67
SYN3-203ENST00000412575 ARID4BQ4LE39 1312 aaPredicted RBP10.88□□□□□ -0.67
SYN3-203ENST00000412575 SETD5Q9C0A6 1442 aa10.87□□□□□ -0.67
SYN3-203ENST00000412575 RNF17Q9BXT8 1623 aaKnown RBP10.87□□□□□ -0.67
SYN3-203ENST00000412575 FAM135AQ9P2D6 1515 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms