RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ADGRL1O94910 1474 aa30.1■■■□□ 2.41
TRIM56-202ENST00000412507 EFCAB2Q5VUJ9 269 aa30.08■■■□□ 2.41
TRIM56-202ENST00000412507 SCAPERQ9BY12 1400 aa30.05■■■□□ 2.4
TRIM56-202ENST00000412507 VPS8Q8N3P4 1428 aa30.04■■■□□ 2.4
TRIM56-202ENST00000412507 MTUS2Q5JR59 1369 aa30.03■■■□□ 2.4
TRIM56-202ENST00000412507 ZMYM4Q5VZL5 1548 aa30■■■□□ 2.39
TRIM56-202ENST00000412507 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
TRIM56-202ENST00000412507 POGZQ7Z3K3 1410 aa29.98■■■□□ 2.39
TRIM56-202ENST00000412507 ARHGEF40Q8TER5 1519 aa29.98■■■□□ 2.39
TRIM56-202ENST00000412507 TIAM1Q13009 1591 aa29.97■■■□□ 2.39
TRIM56-202ENST00000412507 ITSN2Q9NZM3 1697 aa29.95■■■□□ 2.39
TRIM56-202ENST00000412507 GPATCH8Q9UKJ3 1502 aaKnown RBP29.94■■■□□ 2.38
TRIM56-202ENST00000412507 ZFYVE16Q7Z3T8 1539 aa29.92■■■□□ 2.38
TRIM56-202ENST00000412507 ABCC1P33527 1531 aa29.91■■■□□ 2.38
TRIM56-202ENST00000412507 SUPT6HQ7KZ85 1726 aaKnown RBP29.91■■■□□ 2.38
TRIM56-202ENST00000412507 SAMD9LQ8IVG5 1584 aa29.9■■■□□ 2.38
TRIM56-202ENST00000412507 MAGI2Q86UL8 1455 aa29.89■■■□□ 2.38
TRIM56-202ENST00000412507 CCNB3Q8WWL7 1395 aa29.89■■■□□ 2.37
TRIM56-202ENST00000412507 YEATS2Q9ULM3 1422 aa29.88■■■□□ 2.37
TRIM56-202ENST00000412507 ZNF518AQ6AHZ1 1483 aa29.88■■■□□ 2.37
TRIM56-202ENST00000412507 ARHGEF12Q9NZN5 1544 aa29.87■■■□□ 2.37
TRIM56-202ENST00000412507 KDM5CP41229 1560 aa29.87■■■□□ 2.37
TRIM56-202ENST00000412507 SIGLEC1Q9BZZ2 1709 aa29.86■■■□□ 2.37
TRIM56-202ENST00000412507 ZNF777Q9ULD5 760 aaPredicted RBP29.86■■■□□ 2.37
TRIM56-202ENST00000412507 BCORL1Q5H9F3 1711 aa29.85■■■□□ 2.37
TRIM56-202ENST00000412507 AFAP1Q8N556 730 aa29.85■■■□□ 2.37
TRIM56-202ENST00000412507 HECW2Q9P2P5 1572 aa29.82■■■□□ 2.36
TRIM56-202ENST00000412507 ADAMTSL3P82987 1691 aa29.82■■■□□ 2.36
TRIM56-202ENST00000412507 TRAPPC8Q9Y2L5 1435 aa29.81■■■□□ 2.36
TRIM56-202ENST00000412507 ARID4BQ4LE39 1312 aaPredicted RBP29.81■■■□□ 2.36
TRIM56-202ENST00000412507 CFDP1Q9UEE9 299 aaPredicted RBP29.81■■■□□ 2.36
TRIM56-202ENST00000412507 MAP3K1Q13233 1512 aa29.8■■■□□ 2.36
TRIM56-202ENST00000412507 SYCP2Q9BX26 1530 aa29.8■■■□□ 2.36
TRIM56-202ENST00000412507 NCOA2Q15596 1464 aa29.8■■■□□ 2.36
TRIM56-202ENST00000412507 LRRC9Q6ZRR7 1453 aa29.8■■■□□ 2.36
TRIM56-202ENST00000412507 ATP10AO60312 1499 aa29.75■■■□□ 2.35
TRIM56-202ENST00000412507 MYT1LQ9UL68 1186 aa29.75■■■□□ 2.35
TRIM56-202ENST00000412507 KIDINS220Q9ULH0 1771 aa29.75■■■□□ 2.35
TRIM56-202ENST00000412507 ABCA6Q8N139 1617 aa29.74■■■□□ 2.35
TRIM56-202ENST00000412507 DIP2CQ9Y2E4 1556 aa29.73■■■□□ 2.35
TRIM56-202ENST00000412507 MADDQ8WXG6 1647 aa29.73■■■□□ 2.35
TRIM56-202ENST00000412507 PLEKHH2Q8IVE3 1493 aa29.73■■■□□ 2.35
TRIM56-202ENST00000412507 MLH3Q9UHC1 1453 aa29.73■■■□□ 2.35
TRIM56-202ENST00000412507 HNRNPMP52272 730 aaKnown RBP eCLIP29.72■■■□□ 2.35
TRIM56-202ENST00000412507 KANK4Q5T7N3 995 aaPredicted RBP29.72■■■□□ 2.35
TRIM56-202ENST00000412507 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
TRIM56-202ENST00000412507 KIAA1107Q9UPP5 1409 aa29.7■■■□□ 2.34
TRIM56-202ENST00000412507 ZNF644Q9H582 1327 aaPredicted RBP29.69■■■□□ 2.34
TRIM56-202ENST00000412507 RIMS1Q86UR5 1692 aaKnown RBP29.68■■■□□ 2.34
TRIM56-202ENST00000412507 APLP2Q06481 763 aa29.66■■■□□ 2.34
TRIM56-202ENST00000412507 FER1L4A9Z1Z3 1794 aa29.65■■■□□ 2.34
TRIM56-202ENST00000412507 REREQ9P2R6 1566 aa29.63■■■□□ 2.33
TRIM56-202ENST00000412507 MLECQ14165 292 aa29.62■■■□□ 2.33
TRIM56-202ENST00000412507 PTPRMP28827 1452 aa29.61■■■□□ 2.33
TRIM56-202ENST00000412507 CAMSAP2Q08AD1 1489 aa29.61■■■□□ 2.33
TRIM56-202ENST00000412507 INO80Q9ULG1 1556 aaPredicted RBP29.61■■■□□ 2.33
TRIM56-202ENST00000412507 ATP7AQ04656 1500 aa29.61■■■□□ 2.33
TRIM56-202ENST00000412507 SPAG9O60271 1321 aaKnown RBP29.6■■■□□ 2.33
TRIM56-202ENST00000412507 MBD5Q9P267 1494 aa29.59■■■□□ 2.33
TRIM56-202ENST00000412507 MYOM3Q5VTT5 1437 aa29.53■■■□□ 2.32
TRIM56-202ENST00000412507 ADGBQ8N7X0 1667 aa29.52■■■□□ 2.32
TRIM56-202ENST00000412507 AGLP35573 1532 aa29.51■■■□□ 2.32
TRIM56-202ENST00000412507 CCDC141Q6ZP82 1450 aa29.49■■■□□ 2.31
TRIM56-202ENST00000412507 ARHGEF5Q12774 1597 aa29.49■■■□□ 2.31
TRIM56-202ENST00000412507 MIA2Q96PC5 1412 aa29.46■■■□□ 2.31
TRIM56-202ENST00000412507 PLXNC1O60486 1568 aa29.44■■■□□ 2.3
TRIM56-202ENST00000412507 RTEL1-TNFRSF6BF6WH68 1400 aa29.44■■■□□ 2.3
TRIM56-202ENST00000412507 A2MP01023 1474 aa29.43■■■□□ 2.3
TRIM56-202ENST00000412507 RSPH4AQ5TD94 716 aa29.43■■■□□ 2.3
TRIM56-202ENST00000412507 PLPPR3Q6T4P5 718 aa29.43■■■□□ 2.3
TRIM56-202ENST00000412507 PTPN23Q9H3S7 1636 aa29.42■■■□□ 2.3
TRIM56-202ENST00000412507 C3P01024 1663 aa29.35■■■□□ 2.29
TRIM56-202ENST00000412507 MAST1Q9Y2H9 1570 aa29.35■■■□□ 2.29
TRIM56-202ENST00000412507 TSPY4P0CV99 314 aa29.34■■■□□ 2.29
TRIM56-202ENST00000412507 TSPY10P0CW01 314 aa29.34■■■□□ 2.29
TRIM56-202ENST00000412507 CROCC2H7BZ55 1655 aa29.34■■■□□ 2.29
TRIM56-202ENST00000412507 FGD6Q6ZV73 1430 aa29.33■■■□□ 2.29
TRIM56-202ENST00000412507 CEBPAP49715 358 aaPredicted RBP29.3■■■□□ 2.28
TRIM56-202ENST00000412507 ESF1Q9H501 851 aaKnown RBP29.3■■■□□ 2.28
TRIM56-202ENST00000412507 CLTCQ00610 1675 aaKnown RBP29.3■■■□□ 2.28
TRIM56-202ENST00000412507 DHX29Q7Z478 1369 aaKnown RBP29.29■■■□□ 2.28
TRIM56-202ENST00000412507 SETD1BQ9UPS6 1966 aaKnown RBP29.29■■■□□ 2.28
TRIM56-202ENST00000412507 MROH2AA6NES4 1674 aa29.28■■■□□ 2.28
TRIM56-202ENST00000412507 TCOF1Q13428 1488 aaKnown RBP29.28■■■□□ 2.28
TRIM56-202ENST00000412507 DNMT1P26358 1616 aaKnown RBP29.27■■■□□ 2.28
TRIM56-202ENST00000412507 PREX1Q8TCU6 1659 aa29.25■■■□□ 2.27
TRIM56-202ENST00000412507 GGT6Q6P531 493 aa29.25■■■□□ 2.27
TRIM56-202ENST00000412507 LMTK3Q96Q04 1460 aa29.24■■■□□ 2.27
TRIM56-202ENST00000412507 CNTLNQ9NXG0 1405 aa29.24■■■□□ 2.27
TRIM56-202ENST00000412507 ABCC5O15440 1437 aa29.21■■■□□ 2.27
TRIM56-202ENST00000412507 DAPK1P53355 1430 aa29.2■■■□□ 2.26
TRIM56-202ENST00000412507 SHANK2Q9UPX8 1470 aa29.19■■■□□ 2.26
TRIM56-202ENST00000412507 KIF3BO15066 747 aa29.19■■■□□ 2.26
TRIM56-202ENST00000412507 PPARGC1BQ86YN6 1023 aaKnown RBP29.17■■■□□ 2.26
TRIM56-202ENST00000412507 EIF2AK4Q9P2K8 1649 aaKnown RBP29.15■■■□□ 2.26
TRIM56-202ENST00000412507 ZMYM3Q14202 1370 aa29.13■■■□□ 2.25
TRIM56-202ENST00000412507 DUOX2Q9NRD8 1548 aa29.12■■■□□ 2.25
TRIM56-202ENST00000412507 FAM50AQ14320 339 aaKnown RBP29.12■■■□□ 2.25
TRIM56-202ENST00000412507 PPP6R1Q9UPN7 881 aa29.12■■■□□ 2.25
TRIM56-202ENST00000412507 RNF17Q9BXT8 1623 aaKnown RBP29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms