RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
PTPN3-203ENST00000412145 DDX11L8A8MPP1 907 aa9.25□□□□□ -0.93
PTPN3-203ENST00000412145 TPM1P09493 284 aa9.25□□□□□ -0.93
PTPN3-203ENST00000412145 SKOR2Q2VWA4 1001 aaPredicted RBP9.25□□□□□ -0.93
PTPN3-203ENST00000412145 TPM2P07951 284 aa9.25□□□□□ -0.93
PTPN3-203ENST00000412145 MTERF4Q7Z6M4 381 aaKnown RBP9.25□□□□□ -0.93
PTPN3-203ENST00000412145 TSR1Q2NL82 804 aaKnown RBP9.24□□□□□ -0.93
PTPN3-203ENST00000412145 TEX35Q5T0J7 233 aa9.24□□□□□ -0.93
PTPN3-203ENST00000412145 RWDD1Q9H446 243 aaPredicted RBP9.24□□□□□ -0.93
PTPN3-203ENST00000412145 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
PTPN3-203ENST00000412145 EIF3AQ14152 1382 aaKnown RBP9.24□□□□□ -0.93
PTPN3-203ENST00000412145 TMX4Q9H1E5 349 aaPredicted RBP9.24□□□□□ -0.93
PTPN3-203ENST00000412145 ACBD3Q9H3P7 528 aa9.23□□□□□ -0.93
PTPN3-203ENST00000412145 CEP162Q5TB80 1403 aa9.23□□□□□ -0.93
PTPN3-203ENST00000412145 PMFBP1Q8TBY8 1022 aa9.22□□□□□ -0.93
PTPN3-203ENST00000412145 NAP1L2Q9ULW6 460 aaPredicted RBP9.21□□□□□ -0.93
PTPN3-203ENST00000412145 TMF1P82094 1093 aa9.21□□□□□ -0.93
PTPN3-203ENST00000412145 WWC1Q8IX03 1113 aa9.21□□□□□ -0.93
PTPN3-203ENST00000412145 RRP12Q5JTH9 1297 aaKnown RBP9.21□□□□□ -0.93
PTPN3-203ENST00000412145 CARD11Q9BXL7 1154 aa9.21□□□□□ -0.94
PTPN3-203ENST00000412145 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
PTPN3-203ENST00000412145 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
PTPN3-203ENST00000412145 CEP164Q9UPV0 1460 aa9.2□□□□□ -0.94
PTPN3-203ENST00000412145 DHX8Q14562 1220 aaKnown RBP9.2□□□□□ -0.94
PTPN3-203ENST00000412145 HSP90B1P14625 803 aaKnown RBP9.19□□□□□ -0.94
PTPN3-203ENST00000412145 RDXP35241 583 aaKnown RBP9.19□□□□□ -0.94
PTPN3-203ENST00000412145 ZCCHC6Q5VYS8 1495 aaKnown RBP9.19□□□□□ -0.94
PTPN3-203ENST00000412145 ST18O60284 1047 aa9.19□□□□□ -0.94
PTPN3-203ENST00000412145 MLECQ14165 292 aa9.19□□□□□ -0.94
PTPN3-203ENST00000412145 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
PTPN3-203ENST00000412145 KTN1Q86UP2 1357 aaKnown RBP9.19□□□□□ -0.94
PTPN3-203ENST00000412145 RGS3P49796 1198 aa9.19□□□□□ -0.94
PTPN3-203ENST00000412145 IPO7O95373 1038 aaKnown RBP9.19□□□□□ -0.94
PTPN3-203ENST00000412145 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
PTPN3-203ENST00000412145 ROCK2O75116 1388 aaKnown RBP9.18□□□□□ -0.94
PTPN3-203ENST00000412145 MIER1Q8N108 512 aa9.18□□□□□ -0.94
PTPN3-203ENST00000412145 ANKRD20A12PQ8NF67 263 aa9.18□□□□□ -0.94
PTPN3-203ENST00000412145 HOOK1Q9UJC3 728 aaKnown RBP9.18□□□□□ -0.94
PTPN3-203ENST00000412145 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
PTPN3-203ENST00000412145 HSP90AA2PQ14568 343 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-203ENST00000412145 MAP7D2Q96T17 732 aa9.18□□□□□ -0.94
PTPN3-203ENST00000412145 POGKQ9P215 609 aa9.18□□□□□ -0.94
PTPN3-203ENST00000412145 RTF1Q92541 710 aaKnown RBP9.18□□□□□ -0.94
PTPN3-203ENST00000412145 RALBP1Q15311 655 aa9.17□□□□□ -0.94
PTPN3-203ENST00000412145 RGL3Q3MIN7 710 aa9.17□□□□□ -0.94
PTPN3-203ENST00000412145 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-203ENST00000412145 LMOD3Q0VAK6 560 aa9.17□□□□□ -0.94
PTPN3-203ENST00000412145 CWC15Q9P013 229 aaKnown RBP9.17□□□□□ -0.94
PTPN3-203ENST00000412145 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
PTPN3-203ENST00000412145 MYO6Q9UM54 1294 aa9.16□□□□□ -0.94
PTPN3-203ENST00000412145 AK7Q96M32 723 aa9.16□□□□□ -0.94
PTPN3-203ENST00000412145 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
PTPN3-203ENST00000412145 PRM3Q9NNZ6 103 aa9.16□□□□□ -0.94
PTPN3-203ENST00000412145 SUPT16HQ9Y5B9 1047 aaKnown RBP9.16□□□□□ -0.94
PTPN3-203ENST00000412145 SPAG9O60271 1321 aaKnown RBP9.16□□□□□ -0.94
PTPN3-203ENST00000412145 PDE3BQ13370 1112 aa9.16□□□□□ -0.94
PTPN3-203ENST00000412145 FRAT1Q92837 279 aaPredicted RBP9.16□□□□□ -0.94
PTPN3-203ENST00000412145 KIF27Q86VH2 1401 aa9.15□□□□□ -0.94
PTPN3-203ENST00000412145 CCDC47Q96A33 483 aaKnown RBP9.15□□□□□ -0.95
PTPN3-203ENST00000412145 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.95
PTPN3-203ENST00000412145 CCDC191Q8NCU4 936 aa9.14□□□□□ -0.95
PTPN3-203ENST00000412145 NGEFQ8N5V2 710 aa9.14□□□□□ -0.95
PTPN3-203ENST00000412145 CFDP1Q9UEE9 299 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-203ENST00000412145 RASSF8Q8NHQ8 419 aa9.13□□□□□ -0.95
PTPN3-203ENST00000412145 ERCC4Q92889 916 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-203ENST00000412145 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
PTPN3-203ENST00000412145 GOLGA6L19H0YKK7 550 aa9.13□□□□□ -0.95
PTPN3-203ENST00000412145 AAMPQ13685 434 aa9.12□□□□□ -0.95
PTPN3-203ENST00000412145 IRX6P78412 446 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-203ENST00000412145 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.12□□□□□ -0.95
PTPN3-203ENST00000412145 ZRSR2Q15696 482 aaKnown RBP9.12□□□□□ -0.95
PTPN3-203ENST00000412145 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-203ENST00000412145 STK31Q9BXU1 1019 aa9.11□□□□□ -0.95
PTPN3-203ENST00000412145 CCP110O43303 1012 aa9.11□□□□□ -0.95
PTPN3-203ENST00000412145 TNIKQ9UKE5 1360 aa9.11□□□□□ -0.95
PTPN3-203ENST00000412145 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPN3-203ENST00000412145 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
PTPN3-203ENST00000412145 NEXNQ0ZGT2 675 aa9.1□□□□□ -0.95
PTPN3-203ENST00000412145 RUFY1Q96T51 708 aa9.1□□□□□ -0.95
PTPN3-203ENST00000412145 NACADO15069 1562 aa9.1□□□□□ -0.95
PTPN3-203ENST00000412145 CPLX2Q6PUV4 134 aaKnown RBP9.1□□□□□ -0.95
PTPN3-203ENST00000412145 IPO9Q96P70 1041 aaKnown RBP9.1□□□□□ -0.95
PTPN3-203ENST00000412145 TPD52L1Q16890 204 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-203ENST00000412145 HSP90B2PQ58FF3 399 aa9.1□□□□□ -0.95
PTPN3-203ENST00000412145 ISY1Q9ULR0 285 aaKnown RBP9.09□□□□□ -0.95
PTPN3-203ENST00000412145 CCNB3Q8WWL7 1395 aa9.09□□□□□ -0.95
PTPN3-203ENST00000412145 CCDC173Q0VFZ6 552 aa9.09□□□□□ -0.95
PTPN3-203ENST00000412145 MORC1Q86VD1 984 aa9.09□□□□□ -0.95
PTPN3-203ENST00000412145 TXLNBQ8N3L3 684 aa9.08□□□□□ -0.96
PTPN3-203ENST00000412145 ROCK1Q13464 1354 aa9.08□□□□□ -0.96
PTPN3-203ENST00000412145 GORABQ5T7V8 394 aa9.08□□□□□ -0.96
PTPN3-203ENST00000412145 U2SURPO15042 1029 aaKnown RBP9.08□□□□□ -0.96
PTPN3-203ENST00000412145 TPRNQ4KMQ1 711 aa9.08□□□□□ -0.96
PTPN3-203ENST00000412145 BECN2A8MW95 431 aa9.07□□□□□ -0.96
PTPN3-203ENST00000412145 SF3A1Q15459 793 aaKnown RBP9.07□□□□□ -0.96
PTPN3-203ENST00000412145 AMOTL1Q8IY63 956 aa9.07□□□□□ -0.96
PTPN3-203ENST00000412145 RTN4Q9NQC3 1192 aaKnown RBP9.07□□□□□ -0.96
PTPN3-203ENST00000412145 CAVIN1Q6NZI2 390 aaKnown RBP9.06□□□□□ -0.96
PTPN3-203ENST00000412145 GOLGA6L7A0A1B0GV03 622 aa9.06□□□□□ -0.96
PTPN3-203ENST00000412145 AKAP17AQ02040 695 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms