RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 APLP2Q06481 763 aa21.94■■□□□ 1.1
CPNE1-206ENST00000412056 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
CPNE1-206ENST00000412056 NCOA2Q15596 1464 aa21.93■■□□□ 1.1
CPNE1-206ENST00000412056 GPATCH8Q9UKJ3 1502 aaKnown RBP21.92■■□□□ 1.1
CPNE1-206ENST00000412056 AKNAQ7Z591 1439 aa21.92■■□□□ 1.1
CPNE1-206ENST00000412056 PHLDB1Q86UU1 1377 aa21.92■■□□□ 1.1
CPNE1-206ENST00000412056 CCNB3Q8WWL7 1395 aa21.9■■□□□ 1.1
CPNE1-206ENST00000412056 FRMPD1Q5SYB0 1578 aa21.9■■□□□ 1.1
CPNE1-206ENST00000412056 RICTORQ6R327 1708 aa21.89■■□□□ 1.1
CPNE1-206ENST00000412056 ADGRL1O94910 1474 aa21.88■■□□□ 1.09
CPNE1-206ENST00000412056 EFCAB2Q5VUJ9 269 aa21.87■■□□□ 1.09
CPNE1-206ENST00000412056 SAMD9LQ8IVG5 1584 aa21.87■■□□□ 1.09
CPNE1-206ENST00000412056 ABCC1P33527 1531 aa21.85■■□□□ 1.09
CPNE1-206ENST00000412056 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-206ENST00000412056 SCAPERQ9BY12 1400 aa21.83■■□□□ 1.09
CPNE1-206ENST00000412056 RAPGEF3O95398 923 aa21.81■■□□□ 1.08
CPNE1-206ENST00000412056 CFDP1Q9UEE9 299 aaPredicted RBP21.8■■□□□ 1.08
CPNE1-206ENST00000412056 POGZQ7Z3K3 1410 aa21.8■■□□□ 1.08
CPNE1-206ENST00000412056 ZNF777Q9ULD5 760 aaPredicted RBP21.79■■□□□ 1.08
CPNE1-206ENST00000412056 SYCP2Q9BX26 1530 aa21.79■■□□□ 1.08
CPNE1-206ENST00000412056 ARHGEF12Q9NZN5 1544 aa21.79■■□□□ 1.08
CPNE1-206ENST00000412056 ZMYM4Q5VZL5 1548 aa21.77■■□□□ 1.08
CPNE1-206ENST00000412056 MYOM3Q5VTT5 1437 aa21.76■■□□□ 1.07
CPNE1-206ENST00000412056 KDM5CP41229 1560 aa21.74■■□□□ 1.07
CPNE1-206ENST00000412056 CAMSAP2Q08AD1 1489 aa21.74■■□□□ 1.07
CPNE1-206ENST00000412056 TRAPPC8Q9Y2L5 1435 aa21.73■■□□□ 1.07
CPNE1-206ENST00000412056 ZNF518AQ6AHZ1 1483 aa21.73■■□□□ 1.07
CPNE1-206ENST00000412056 PLEKHH2Q8IVE3 1493 aa21.73■■□□□ 1.07
CPNE1-206ENST00000412056 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-206ENST00000412056 ARHGEF40Q8TER5 1519 aa21.71■■□□□ 1.07
CPNE1-206ENST00000412056 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
CPNE1-206ENST00000412056 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
CPNE1-206ENST00000412056 PPARGC1BQ86YN6 1023 aaKnown RBP21.7■■□□□ 1.06
CPNE1-206ENST00000412056 MIA2Q96PC5 1412 aa21.69■■□□□ 1.06
CPNE1-206ENST00000412056 ZFYVE16Q7Z3T8 1539 aa21.69■■□□□ 1.06
CPNE1-206ENST00000412056 PTPN23Q9H3S7 1636 aa21.69■■□□□ 1.06
CPNE1-206ENST00000412056 HNRNPMP52272 730 aaKnown RBP eCLIP21.68■■□□□ 1.061e-7■■■■□ 25.4
CPNE1-206ENST00000412056 AFAP1Q8N556 730 aa21.68■■□□□ 1.06
CPNE1-206ENST00000412056 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
CPNE1-206ENST00000412056 YEATS2Q9ULM3 1422 aa21.66■■□□□ 1.06
CPNE1-206ENST00000412056 KIDINS220Q9ULH0 1771 aa21.66■■□□□ 1.06
CPNE1-206ENST00000412056 MAGI2Q86UL8 1455 aa21.65■■□□□ 1.06
CPNE1-206ENST00000412056 FGD6Q6ZV73 1430 aa21.65■■□□□ 1.06
CPNE1-206ENST00000412056 ARHGEF5Q12774 1597 aa21.64■■□□□ 1.05
CPNE1-206ENST00000412056 ABCA6Q8N139 1617 aa21.63■■□□□ 1.05
CPNE1-206ENST00000412056 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-206ENST00000412056 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
CPNE1-206ENST00000412056 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
CPNE1-206ENST00000412056 SIGLEC1Q9BZZ2 1709 aa21.61■■□□□ 1.05
CPNE1-206ENST00000412056 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
CPNE1-206ENST00000412056 CCDC141Q6ZP82 1450 aa21.61■■□□□ 1.05
CPNE1-206ENST00000412056 ATP7AQ04656 1500 aa21.6■■□□□ 1.05
CPNE1-206ENST00000412056 CROCC2H7BZ55 1655 aa21.59■■□□□ 1.05
CPNE1-206ENST00000412056 MYT1LQ9UL68 1186 aa21.57■■□□□ 1.04
CPNE1-206ENST00000412056 SPAG9O60271 1321 aaKnown RBP21.56■■□□□ 1.04
CPNE1-206ENST00000412056 DNMT1P26358 1616 aaKnown RBP21.56■■□□□ 1.04
CPNE1-206ENST00000412056 ATP10AO60312 1499 aa21.55■■□□□ 1.04
CPNE1-206ENST00000412056 ADGBQ8N7X0 1667 aa21.54■■□□□ 1.04
CPNE1-206ENST00000412056 C9orf84Q5VXU9 1444 aa21.54■■□□□ 1.04
CPNE1-206ENST00000412056 MAST1Q9Y2H9 1570 aa21.53■■□□□ 1.04
CPNE1-206ENST00000412056 REREQ9P2R6 1566 aa21.52■■□□□ 1.04
CPNE1-206ENST00000412056 RSPH4AQ5TD94 716 aa21.51■■□□□ 1.03
CPNE1-206ENST00000412056 BCORL1Q5H9F3 1711 aa21.5■■□□□ 1.03
CPNE1-206ENST00000412056 RTEL1-TNFRSF6BF6WH68 1400 aa21.5■■□□□ 1.03
CPNE1-206ENST00000412056 ABCC5O15440 1437 aa21.49■■□□□ 1.03
CPNE1-206ENST00000412056 DAPK1P53355 1430 aa21.49■■□□□ 1.03
CPNE1-206ENST00000412056 FAM50AQ14320 339 aaKnown RBP21.48■■□□□ 1.03
CPNE1-206ENST00000412056 SHANK2Q9UPX8 1470 aa21.47■■□□□ 1.03
CPNE1-206ENST00000412056 PLXNC1O60486 1568 aa21.46■■□□□ 1.03
CPNE1-206ENST00000412056 ARID4BQ4LE39 1312 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-206ENST00000412056 ADAMTSL3P82987 1691 aa21.45■■□□□ 1.02
CPNE1-206ENST00000412056 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
CPNE1-206ENST00000412056 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
CPNE1-206ENST00000412056 RRBP1Q9P2E9 1410 aaKnown RBP21.44■■□□□ 1.02
CPNE1-206ENST00000412056 A2MP01023 1474 aa21.44■■□□□ 1.02
CPNE1-206ENST00000412056 AGLP35573 1532 aa21.44■■□□□ 1.02
CPNE1-206ENST00000412056 KDM4FA0A1W2PPD8 638 aa21.42■■□□□ 1.02
CPNE1-206ENST00000412056 MADDQ8WXG6 1647 aa21.4■■□□□ 1.02
CPNE1-206ENST00000412056 FER1L4A9Z1Z3 1794 aa21.4■■□□□ 1.02
CPNE1-206ENST00000412056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.38■■□□□ 1.017e-10■■□□□ 13.2
CPNE1-206ENST00000412056 RIMS1Q86UR5 1692 aaKnown RBP21.37■■□□□ 1.01
CPNE1-206ENST00000412056 MLECQ14165 292 aa21.36■■□□□ 1.01
CPNE1-206ENST00000412056 CHIC2Q9UKJ5 165 aa21.36■■□□□ 1.01
CPNE1-206ENST00000412056 PTPRKQ15262 1439 aa21.36■■□□□ 1.01
CPNE1-206ENST00000412056 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
CPNE1-206ENST00000412056 ADGRL2O95490 1459 aa21.35■■□□□ 1.01
CPNE1-206ENST00000412056 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
CPNE1-206ENST00000412056 KIF15Q9NS87 1388 aa21.33■■□□□ 1
CPNE1-206ENST00000412056 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
CPNE1-206ENST00000412056 EIF2AK4Q9P2K8 1649 aaKnown RBP21.32■■□□□ 1
CPNE1-206ENST00000412056 NCOA1Q15788 1441 aa21.3■■□□□ 1
CPNE1-206ENST00000412056 ITGAEP38570 1179 aa21.3■■□□□ 1
CPNE1-206ENST00000412056 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
CPNE1-206ENST00000412056 RNF17Q9BXT8 1623 aaKnown RBP21.28■■□□□ 1
CPNE1-206ENST00000412056 KIF3BO15066 747 aa21.26■□□□□ 0.99
CPNE1-206ENST00000412056 ERBINQ96RT1 1412 aa21.26■□□□□ 0.99
CPNE1-206ENST00000412056 PTPRMP28827 1452 aa21.26■□□□□ 0.99
CPNE1-206ENST00000412056 CLTCQ00610 1675 aaKnown RBP21.25■□□□□ 0.99
CPNE1-206ENST00000412056 ROCK1Q13464 1354 aa21.24■□□□□ 0.99
CPNE1-206ENST00000412056 MROH1Q8NDA8 1641 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms