RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
CPEB3-202ENST00000412050 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
CPEB3-202ENST00000412050 CCDC9Q9Y3X0 531 aaKnown RBP13.61□□□□□ -0.23
CPEB3-202ENST00000412050 KLHL34Q8N239 644 aa13.61□□□□□ -0.23
CPEB3-202ENST00000412050 USP35Q9P2H5 1018 aa13.6□□□□□ -0.23
CPEB3-202ENST00000412050 HSP90B1P14625 803 aaKnown RBP13.59□□□□□ -0.23
CPEB3-202ENST00000412050 ZNF330Q9Y3S2 320 aaPredicted RBP13.59□□□□□ -0.23
CPEB3-202ENST00000412050 GZF1Q9H116 711 aaPredicted RBP13.59□□□□□ -0.23
CPEB3-202ENST00000412050 MAP7D2Q96T17 732 aa13.58□□□□□ -0.23
CPEB3-202ENST00000412050 PDCL3Q9H2J4 239 aa13.58□□□□□ -0.24
CPEB3-202ENST00000412050 APBB1O00213 710 aa13.57□□□□□ -0.24
CPEB3-202ENST00000412050 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
CPEB3-202ENST00000412050 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
CPEB3-202ENST00000412050 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
CPEB3-202ENST00000412050 HMGN5P82970 282 aaKnown RBP13.56□□□□□ -0.24
CPEB3-202ENST00000412050 CTDP1Q9Y5B0 961 aaPredicted RBP13.56□□□□□ -0.24
CPEB3-202ENST00000412050 RAD21O60216 631 aa13.55□□□□□ -0.24
CPEB3-202ENST00000412050 TPM3P06753 285 aa13.55□□□□□ -0.24
CPEB3-202ENST00000412050 CFAP53Q96M91 514 aa13.54□□□□□ -0.24
CPEB3-202ENST00000412050 MCCP23508 829 aa13.54□□□□□ -0.24
CPEB3-202ENST00000412050 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPEB3-202ENST00000412050 MAPK8IP3Q9UPT6 1336 aa13.53□□□□□ -0.24
CPEB3-202ENST00000412050 HMMRO75330 724 aa13.53□□□□□ -0.24
CPEB3-202ENST00000412050 SUPT16HQ9Y5B9 1047 aaKnown RBP13.53□□□□□ -0.24
CPEB3-202ENST00000412050 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
CPEB3-202ENST00000412050 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
CPEB3-202ENST00000412050 U2SURPO15042 1029 aaKnown RBP13.52□□□□□ -0.24
CPEB3-202ENST00000412050 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
CPEB3-202ENST00000412050 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
CPEB3-202ENST00000412050 DHX37Q8IY37 1157 aaKnown RBP13.51□□□□□ -0.25
CPEB3-202ENST00000412050 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
CPEB3-202ENST00000412050 KIAA1211Q6ZU35 1233 aa13.51□□□□□ -0.25
CPEB3-202ENST00000412050 CHMP3Q9Y3E7 222 aa13.5□□□□□ -0.25
CPEB3-202ENST00000412050 ZFYVE27Q5T4F4 411 aa13.5□□□□□ -0.25
CPEB3-202ENST00000412050 PHF14O94880 888 aa13.49□□□□□ -0.25
CPEB3-202ENST00000412050 KNSTRNQ9Y448 316 aa13.48□□□□□ -0.25
CPEB3-202ENST00000412050 MSH5O43196 834 aa13.47□□□□□ -0.25
CPEB3-202ENST00000412050 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
CPEB3-202ENST00000412050 RSPH4AQ5TD94 716 aa13.47□□□□□ -0.25
CPEB3-202ENST00000412050 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
CPEB3-202ENST00000412050 AEBP2Q6ZN18 517 aaPredicted RBP13.47□□□□□ -0.25
CPEB3-202ENST00000412050 TPD52L1Q16890 204 aaPredicted RBP13.46□□□□□ -0.26
CPEB3-202ENST00000412050 KCNH8Q96L42 1107 aa13.45□□□□□ -0.26
CPEB3-202ENST00000412050 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
CPEB3-202ENST00000412050 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
CPEB3-202ENST00000412050 TEX35Q5T0J7 233 aa13.44□□□□□ -0.26
CPEB3-202ENST00000412050 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
CPEB3-202ENST00000412050 TSPY4P0CV99 314 aa13.44□□□□□ -0.26
CPEB3-202ENST00000412050 TSPY10P0CW01 314 aa13.44□□□□□ -0.26
CPEB3-202ENST00000412050 ANKRD62A6NC57 917 aa13.44□□□□□ -0.26
CPEB3-202ENST00000412050 POGKQ9P215 609 aa13.44□□□□□ -0.26
CPEB3-202ENST00000412050 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
CPEB3-202ENST00000412050 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
CPEB3-202ENST00000412050 CC2D1BQ5T0F9 858 aaKnown RBP13.43□□□□□ -0.26
CPEB3-202ENST00000412050 GORABQ5T7V8 394 aa13.43□□□□□ -0.26
CPEB3-202ENST00000412050 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
CPEB3-202ENST00000412050 SOGA3Q5TF21 947 aa13.43□□□□□ -0.26
CPEB3-202ENST00000412050 SKIDA1Q1XH10 827 aa13.42□□□□□ -0.26
CPEB3-202ENST00000412050 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
CPEB3-202ENST00000412050 NEFHP12036 1026 aa13.41□□□□□ -0.26
CPEB3-202ENST00000412050 FRAT2O75474 233 aaPredicted RBP13.4□□□□□ -0.26
CPEB3-202ENST00000412050 GOLGA6L3A6NEY3 463 aa13.4□□□□□ -0.26
CPEB3-202ENST00000412050 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.26
CPEB3-202ENST00000412050 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
CPEB3-202ENST00000412050 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
CPEB3-202ENST00000412050 CCDC70Q6NSX1 233 aa13.39□□□□□ -0.27
CPEB3-202ENST00000412050 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
CPEB3-202ENST00000412050 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
CPEB3-202ENST00000412050 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
CPEB3-202ENST00000412050 DEKP35659 375 aaKnown RBP13.38□□□□□ -0.27
CPEB3-202ENST00000412050 HSP90AB2PQ58FF8 381 aa13.38□□□□□ -0.27
CPEB3-202ENST00000412050 NF2P35240 595 aa13.38□□□□□ -0.27
CPEB3-202ENST00000412050 TRIM6-TRIM34B2RNG4 842 aa13.38□□□□□ -0.27
CPEB3-202ENST00000412050 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
CPEB3-202ENST00000412050 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
CPEB3-202ENST00000412050 ZRSR2Q15696 482 aaKnown RBP13.38□□□□□ -0.27
CPEB3-202ENST00000412050 NOL8Q76FK4 1167 aaKnown RBP13.38□□□□□ -0.27
CPEB3-202ENST00000412050 HSP90AB3PQ58FF7 597 aa13.37□□□□□ -0.27
CPEB3-202ENST00000412050 MIER1Q8N108 512 aa13.37□□□□□ -0.27
CPEB3-202ENST00000412050 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
CPEB3-202ENST00000412050 FOXD4L5Q5VV16 416 aaPredicted RBP13.37□□□□□ -0.27
CPEB3-202ENST00000412050 FOXD4L4Q8WXT5 416 aaPredicted RBP13.37□□□□□ -0.27
CPEB3-202ENST00000412050 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
CPEB3-202ENST00000412050 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
CPEB3-202ENST00000412050 WWC2Q6AWC2 1192 aa13.37□□□□□ -0.27
CPEB3-202ENST00000412050 DDX23Q9BUQ8 820 aaKnown RBP13.37□□□□□ -0.27
CPEB3-202ENST00000412050 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
CPEB3-202ENST00000412050 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
CPEB3-202ENST00000412050 RRP7BPQ9NSQ0 103 aa13.36□□□□□ -0.27
CPEB3-202ENST00000412050 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
CPEB3-202ENST00000412050 TOMM22Q9NS69 142 aa13.35□□□□□ -0.27
CPEB3-202ENST00000412050 STAC3Q96MF2 364 aa13.35□□□□□ -0.27
CPEB3-202ENST00000412050 CHMP4BQ9H444 224 aaKnown RBP13.34□□□□□ -0.27
CPEB3-202ENST00000412050 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
CPEB3-202ENST00000412050 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
CPEB3-202ENST00000412050 TPM2P07951 284 aa13.34□□□□□ -0.27
CPEB3-202ENST00000412050 CCDC175P0C221 793 aa13.33□□□□□ -0.28
CPEB3-202ENST00000412050 FOXD4L6Q3SYB3 417 aaPredicted RBP13.33□□□□□ -0.28
CPEB3-202ENST00000412050 FOXD4L3Q6VB84 417 aaPredicted RBP13.33□□□□□ -0.28
CPEB3-202ENST00000412050 CLASRPQ8N2M8 674 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms