RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 CDC42BPBQ9Y5S2 1711 aa25.64■■□□□ 1.69
GCFC2-202ENST00000409857 TEX14Q8IWB6 1497 aa25.63■■□□□ 1.69
GCFC2-202ENST00000409857 CFAP74Q9C0B2 1584 aa25.62■■□□□ 1.69
GCFC2-202ENST00000409857 GPATCH8Q9UKJ3 1502 aaKnown RBP25.62■■□□□ 1.69
GCFC2-202ENST00000409857 CCNB3Q8WWL7 1395 aa25.61■■□□□ 1.69
GCFC2-202ENST00000409857 NEO1Q92859 1461 aa25.56■■□□□ 1.68
GCFC2-202ENST00000409857 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
GCFC2-202ENST00000409857 FANCAO15360 1455 aa25.55■■□□□ 1.68
GCFC2-202ENST00000409857 PHLDB1Q86UU1 1377 aa25.54■■□□□ 1.68
GCFC2-202ENST00000409857 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
GCFC2-202ENST00000409857 MIA2Q96PC5 1412 aa25.51■■□□□ 1.67
GCFC2-202ENST00000409857 EFCAB2Q5VUJ9 269 aa25.51■■□□□ 1.67
GCFC2-202ENST00000409857 CFDP1Q9UEE9 299 aaPredicted RBP25.48■■□□□ 1.67
GCFC2-202ENST00000409857 AKNAQ7Z591 1439 aa25.47■■□□□ 1.67
GCFC2-202ENST00000409857 SCAF1Q9H7N4 1312 aaKnown RBP25.47■■□□□ 1.67
GCFC2-202ENST00000409857 SAMD9LQ8IVG5 1584 aa25.47■■□□□ 1.67
GCFC2-202ENST00000409857 ABCC1P33527 1531 aa25.44■■□□□ 1.66
GCFC2-202ENST00000409857 PLEKHH2Q8IVE3 1493 aa25.44■■□□□ 1.66
GCFC2-202ENST00000409857 FGD6Q6ZV73 1430 aa25.44■■□□□ 1.66
GCFC2-202ENST00000409857 PTPN23Q9H3S7 1636 aa25.42■■□□□ 1.66
GCFC2-202ENST00000409857 ADGRL1O94910 1474 aa25.42■■□□□ 1.66
GCFC2-202ENST00000409857 KIAA1107Q9UPP5 1409 aa25.4■■□□□ 1.66
GCFC2-202ENST00000409857 CAMSAP2Q08AD1 1489 aa25.4■■□□□ 1.66
GCFC2-202ENST00000409857 TCOF1Q13428 1488 aaKnown RBP25.4■■□□□ 1.66
GCFC2-202ENST00000409857 PELP1Q8IZL8 1130 aaKnown RBP25.39■■□□□ 1.66
GCFC2-202ENST00000409857 KDM6BO15054 1643 aa25.38■■□□□ 1.65
GCFC2-202ENST00000409857 CCER1Q8TC90 406 aaPredicted RBP25.37■■□□□ 1.65
GCFC2-202ENST00000409857 RICTORQ6R327 1708 aa25.36■■□□□ 1.65
GCFC2-202ENST00000409857 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
GCFC2-202ENST00000409857 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
GCFC2-202ENST00000409857 SYCP2Q9BX26 1530 aa25.35■■□□□ 1.65
GCFC2-202ENST00000409857 ARHGEF12Q9NZN5 1544 aa25.35■■□□□ 1.65
GCFC2-202ENST00000409857 DENND4BO75064 1496 aaPredicted RBP25.35■■□□□ 1.65
GCFC2-202ENST00000409857 RRBP1Q9P2E9 1410 aaKnown RBP25.34■■□□□ 1.65
GCFC2-202ENST00000409857 ARHGEF5Q12774 1597 aa25.34■■□□□ 1.65
GCFC2-202ENST00000409857 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.65
GCFC2-202ENST00000409857 COL17A1Q9UMD9 1497 aaPredicted RBP25.33■■□□□ 1.65
GCFC2-202ENST00000409857 POGZQ7Z3K3 1410 aa25.32■■□□□ 1.64
GCFC2-202ENST00000409857 MBD5Q9P267 1494 aa25.32■■□□□ 1.64
GCFC2-202ENST00000409857 FRMPD1Q5SYB0 1578 aa25.32■■□□□ 1.64
GCFC2-202ENST00000409857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
GCFC2-202ENST00000409857 ZNF518AQ6AHZ1 1483 aa25.3■■□□□ 1.64
GCFC2-202ENST00000409857 KDM5CP41229 1560 aa25.29■■□□□ 1.64
GCFC2-202ENST00000409857 RSPH4AQ5TD94 716 aa25.28■■□□□ 1.64
GCFC2-202ENST00000409857 ZMYM4Q5VZL5 1548 aa25.28■■□□□ 1.64
GCFC2-202ENST00000409857 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
GCFC2-202ENST00000409857 TRAPPC8Q9Y2L5 1435 aa25.26■■□□□ 1.63
GCFC2-202ENST00000409857 CCDC141Q6ZP82 1450 aa25.25■■□□□ 1.63
GCFC2-202ENST00000409857 HNRNPMP52272 730 aaKnown RBP eCLIP25.25■■□□□ 1.63
GCFC2-202ENST00000409857 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
GCFC2-202ENST00000409857 RAPGEF3O95398 923 aa25.22■■□□□ 1.63
GCFC2-202ENST00000409857 MAGI2Q86UL8 1455 aa25.21■■□□□ 1.63
GCFC2-202ENST00000409857 HECW2Q9P2P5 1572 aa25.2■■□□□ 1.63
GCFC2-202ENST00000409857 MAST1Q9Y2H9 1570 aa25.2■■□□□ 1.62
GCFC2-202ENST00000409857 FAM50AQ14320 339 aaKnown RBP25.2■■□□□ 1.62
GCFC2-202ENST00000409857 MLH3Q9UHC1 1453 aa25.19■■□□□ 1.62
GCFC2-202ENST00000409857 SHANK2Q9UPX8 1470 aa25.19■■□□□ 1.62
GCFC2-202ENST00000409857 INO80Q9ULG1 1556 aaPredicted RBP25.19■■□□□ 1.62
GCFC2-202ENST00000409857 DAPK1P53355 1430 aa25.19■■□□□ 1.62
GCFC2-202ENST00000409857 AFAP1Q8N556 730 aa25.19■■□□□ 1.62
GCFC2-202ENST00000409857 ABCC5O15440 1437 aa25.18■■□□□ 1.62
GCFC2-202ENST00000409857 KIDINS220Q9ULH0 1771 aa25.16■■□□□ 1.62
GCFC2-202ENST00000409857 RTEL1-TNFRSF6BF6WH68 1400 aa25.16■■□□□ 1.62
GCFC2-202ENST00000409857 ZFYVE16Q7Z3T8 1539 aa25.15■■□□□ 1.62
GCFC2-202ENST00000409857 ATP7AQ04656 1500 aa25.14■■□□□ 1.62
GCFC2-202ENST00000409857 SPAG9O60271 1321 aaKnown RBP25.13■■□□□ 1.61
GCFC2-202ENST00000409857 ARHGEF40Q8TER5 1519 aa25.12■■□□□ 1.61
GCFC2-202ENST00000409857 ADGBQ8N7X0 1667 aa25.12■■□□□ 1.61
GCFC2-202ENST00000409857 TSPY4P0CV99 314 aa25.12■■□□□ 1.61
GCFC2-202ENST00000409857 TSPY10P0CW01 314 aa25.12■■□□□ 1.61
GCFC2-202ENST00000409857 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
GCFC2-202ENST00000409857 PLXNC1O60486 1568 aa25.1■■□□□ 1.61
GCFC2-202ENST00000409857 ABCA6Q8N139 1617 aa25.09■■□□□ 1.61
GCFC2-202ENST00000409857 DIP2CQ9Y2E4 1556 aa25.07■■□□□ 1.6
GCFC2-202ENST00000409857 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
GCFC2-202ENST00000409857 NEUROD1Q13562 356 aa25.06■■□□□ 1.6
GCFC2-202ENST00000409857 PTPRKQ15262 1439 aa25.05■■□□□ 1.6
GCFC2-202ENST00000409857 YEATS2Q9ULM3 1422 aa25.05■■□□□ 1.6
GCFC2-202ENST00000409857 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
GCFC2-202ENST00000409857 ACIN1Q9UKV3 1341 aaKnown RBP25.05■■□□□ 1.6
GCFC2-202ENST00000409857 DIEXFQ68CQ4 756 aaKnown RBP25.05■■□□□ 1.6
GCFC2-202ENST00000409857 ATP10AO60312 1499 aa25.02■■□□□ 1.6
GCFC2-202ENST00000409857 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
GCFC2-202ENST00000409857 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
GCFC2-202ENST00000409857 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
GCFC2-202ENST00000409857 NCOA1Q15788 1441 aa25■■□□□ 1.59
GCFC2-202ENST00000409857 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
GCFC2-202ENST00000409857 ITGAEP38570 1179 aa24.96■■□□□ 1.59
GCFC2-202ENST00000409857 A2MP01023 1474 aa24.96■■□□□ 1.59
GCFC2-202ENST00000409857 CHIC2Q9UKJ5 165 aa24.95■■□□□ 1.58
GCFC2-202ENST00000409857 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
GCFC2-202ENST00000409857 BCORL1Q5H9F3 1711 aa24.94■■□□□ 1.58
GCFC2-202ENST00000409857 AGLP35573 1532 aa24.93■■□□□ 1.58
GCFC2-202ENST00000409857 DHX29Q7Z478 1369 aaKnown RBP24.93■■□□□ 1.58
GCFC2-202ENST00000409857 GCC2Q8IWJ2 1684 aa24.92■■□□□ 1.58
GCFC2-202ENST00000409857 EIF2AK4Q9P2K8 1649 aaKnown RBP24.92■■□□□ 1.58
GCFC2-202ENST00000409857 SIGLEC1Q9BZZ2 1709 aa24.92■■□□□ 1.58
GCFC2-202ENST00000409857 ERBINQ96RT1 1412 aa24.9■■□□□ 1.58
GCFC2-202ENST00000409857 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
GCFC2-202ENST00000409857 HFM1A2PYH4 1435 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms