RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GRIN2AQ12879 1464 aa11.2□□□□□ -0.62
CXCR4-202ENST00000409817 SYNJ2O15056 1496 aa11.18□□□□□ -0.62
CXCR4-202ENST00000409817 CCDC18Q5T9S5 1454 aa11.18□□□□□ -0.62
CXCR4-202ENST00000409817 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
CXCR4-202ENST00000409817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.17□□□□□ -0.62
CXCR4-202ENST00000409817 ZBTB47Q9UFB7 747 aaPredicted RBP11.16□□□□□ -0.62
CXCR4-202ENST00000409817 HECW1Q76N89 1606 aa11.16□□□□□ -0.62
CXCR4-202ENST00000409817 CIZ1Q9ULV3 898 aaPredicted RBP11.15□□□□□ -0.62
CXCR4-202ENST00000409817 PHLDB1Q86UU1 1377 aa11.14□□□□□ -0.63
CXCR4-202ENST00000409817 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
CXCR4-202ENST00000409817 EHBP1L1Q8N3D4 1523 aa11.14□□□□□ -0.63
CXCR4-202ENST00000409817 MTUS2Q5JR59 1369 aa11.14□□□□□ -0.63
CXCR4-202ENST00000409817 PLEKHG5O94827 1062 aa11.13□□□□□ -0.63
CXCR4-202ENST00000409817 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
CXCR4-202ENST00000409817 KIAA0556O60303 1618 aa11.12□□□□□ -0.63
CXCR4-202ENST00000409817 NUP160Q12769 1436 aa11.12□□□□□ -0.63
CXCR4-202ENST00000409817 PAXIP1Q6ZW49 1069 aaPredicted RBP11.12□□□□□ -0.63
CXCR4-202ENST00000409817 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
CXCR4-202ENST00000409817 CHMP7Q8WUX9 453 aaPredicted RBP11.12□□□□□ -0.63
CXCR4-202ENST00000409817 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
CXCR4-202ENST00000409817 DISP1Q96F81 1524 aa11.1□□□□□ -0.63
CXCR4-202ENST00000409817 SUPT6HQ7KZ85 1726 aaKnown RBP11.1□□□□□ -0.63
CXCR4-202ENST00000409817 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
CXCR4-202ENST00000409817 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
CXCR4-202ENST00000409817 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
CXCR4-202ENST00000409817 NUBP1P53384 320 aa11.08□□□□□ -0.64
CXCR4-202ENST00000409817 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
CXCR4-202ENST00000409817 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
CXCR4-202ENST00000409817 ARHGEF11O15085 1522 aa11.07□□□□□ -0.64
CXCR4-202ENST00000409817 NCOA2Q15596 1464 aa11.07□□□□□ -0.64
CXCR4-202ENST00000409817 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
CXCR4-202ENST00000409817 DHX57Q6P158 1386 aaKnown RBP11.07□□□□□ -0.64
CXCR4-202ENST00000409817 CFAP44Q96MT7 982 aa11.07□□□□□ -0.64
CXCR4-202ENST00000409817 MYOM3Q5VTT5 1437 aa11.07□□□□□ -0.64
CXCR4-202ENST00000409817 AKT1S1Q96B36 256 aa11.06□□□□□ -0.64
CXCR4-202ENST00000409817 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
CXCR4-202ENST00000409817 SPDYE1Q8NFV5 336 aaPredicted RBP11.05□□□□□ -0.64
CXCR4-202ENST00000409817 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
CXCR4-202ENST00000409817 RAPGEF6Q8TEU7 1601 aa11.04□□□□□ -0.64
CXCR4-202ENST00000409817 FAM50AQ14320 339 aaKnown RBP11.04□□□□□ -0.64
CXCR4-202ENST00000409817 MNX1P50219 401 aaPredicted RBP11.04□□□□□ -0.64
CXCR4-202ENST00000409817 RBM42Q9BTD8 480 aaKnown RBP11.03□□□□□ -0.64
CXCR4-202ENST00000409817 CREBZFQ9NS37 354 aa11.03□□□□□ -0.64
CXCR4-202ENST00000409817 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.64
CXCR4-202ENST00000409817 RAB3GAP2Q9H2M9 1393 aa11.02□□□□□ -0.65
CXCR4-202ENST00000409817 MIA2Q96PC5 1412 aa11.02□□□□□ -0.65
CXCR4-202ENST00000409817 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
CXCR4-202ENST00000409817 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
CXCR4-202ENST00000409817 NUP153P49790 1475 aaKnown RBP11.01□□□□□ -0.65
CXCR4-202ENST00000409817 TCOF1Q13428 1488 aaKnown RBP11.01□□□□□ -0.65
CXCR4-202ENST00000409817 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
CXCR4-202ENST00000409817 ITGAEP38570 1179 aa11□□□□□ -0.65
CXCR4-202ENST00000409817 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
CXCR4-202ENST00000409817 CDK13Q14004 1512 aaKnown RBP11□□□□□ -0.65
CXCR4-202ENST00000409817 PTPN23Q9H3S7 1636 aa10.99□□□□□ -0.65
CXCR4-202ENST00000409817 GSE1Q14687 1217 aa10.99□□□□□ -0.65
CXCR4-202ENST00000409817 HS6ST3Q8IZP7 471 aa10.99□□□□□ -0.65
CXCR4-202ENST00000409817 BCANQ96GW7 911 aa10.99□□□□□ -0.65
CXCR4-202ENST00000409817 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
CXCR4-202ENST00000409817 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
CXCR4-202ENST00000409817 HFM1A2PYH4 1435 aa10.98□□□□□ -0.65
CXCR4-202ENST00000409817 AKNAQ7Z591 1439 aa10.96□□□□□ -0.65
CXCR4-202ENST00000409817 ACIN1Q9UKV3 1341 aaKnown RBP10.96□□□□□ -0.65
CXCR4-202ENST00000409817 PRR29P0C7W0 189 aa10.95□□□□□ -0.66
CXCR4-202ENST00000409817 TROQ12816 1431 aaPredicted RBP10.95□□□□□ -0.66
CXCR4-202ENST00000409817 ABCA8O94911 1581 aa10.95□□□□□ -0.66
CXCR4-202ENST00000409817 CHD1O14646 1710 aa10.95□□□□□ -0.66
CXCR4-202ENST00000409817 DNAJC5Q9H3Z4 198 aa10.94□□□□□ -0.66
CXCR4-202ENST00000409817 PLB1Q6P1J6 1458 aa10.94□□□□□ -0.66
CXCR4-202ENST00000409817 ADCY10Q96PN6 1610 aa10.94□□□□□ -0.66
CXCR4-202ENST00000409817 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
CXCR4-202ENST00000409817 SHROOM2Q13796 1616 aa10.93□□□□□ -0.66
CXCR4-202ENST00000409817 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
CXCR4-202ENST00000409817 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
CXCR4-202ENST00000409817 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
CXCR4-202ENST00000409817 TIMELESSQ9UNS1 1208 aa10.92□□□□□ -0.66
CXCR4-202ENST00000409817 ITSN2Q9NZM3 1697 aa10.92□□□□□ -0.66
CXCR4-202ENST00000409817 PTPRKQ15262 1439 aa10.92□□□□□ -0.66
CXCR4-202ENST00000409817 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
CXCR4-202ENST00000409817 NAIPQ13075 1403 aa10.91□□□□□ -0.66
CXCR4-202ENST00000409817 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
CXCR4-202ENST00000409817 UACAQ9BZF9 1416 aa10.9□□□□□ -0.66
CXCR4-202ENST00000409817 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
CXCR4-202ENST00000409817 PTPRGP23470 1445 aa10.9□□□□□ -0.67
CXCR4-202ENST00000409817 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.67
CXCR4-202ENST00000409817 ROCK1Q13464 1354 aa10.89□□□□□ -0.67
CXCR4-202ENST00000409817 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
CXCR4-202ENST00000409817 DIEXFQ68CQ4 756 aaKnown RBP10.88□□□□□ -0.67
CXCR4-202ENST00000409817 FAM212AQ96EL1 285 aa10.88□□□□□ -0.67
CXCR4-202ENST00000409817 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
CXCR4-202ENST00000409817 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
CXCR4-202ENST00000409817 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
CXCR4-202ENST00000409817 ATP10BO94823 1461 aa10.87□□□□□ -0.67
CXCR4-202ENST00000409817 KIF14Q15058 1648 aa10.87□□□□□ -0.67
CXCR4-202ENST00000409817 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
CXCR4-202ENST00000409817 DAPK1P53355 1430 aa10.86□□□□□ -0.67
CXCR4-202ENST00000409817 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
CXCR4-202ENST00000409817 CLASP1Q7Z460 1538 aa10.85□□□□□ -0.67
CXCR4-202ENST00000409817 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
CXCR4-202ENST00000409817 CHRM1P11229 460 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms