RNA–Protein interactions for RNA: ENST00000409784.7

RAB1A-203, Transcript of RAB1A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB1A, Length 2,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1A-203ENST00000409784 MTERF4Q7Z6M4 381 aaKnown RBP20.57■□□□□ 0.88
RAB1A-203ENST00000409784 TERF1P54274 439 aa20.54■□□□□ 0.88
RAB1A-203ENST00000409784 CUX2O14529 1486 aa20.54■□□□□ 0.88
RAB1A-203ENST00000409784 PTMAP06454 111 aaKnown RBP20.53■□□□□ 0.88
RAB1A-203ENST00000409784 HNRNPUQ00839 825 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAB1A-203ENST00000409784 PRDM10Q9NQV6 1147 aa20.53■□□□□ 0.88
RAB1A-203ENST00000409784 FAM193AP78312 1265 aa20.53■□□□□ 0.88
RAB1A-203ENST00000409784 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
RAB1A-203ENST00000409784 ZNF622Q969S3 477 aaKnown RBP eCLIP20.51■□□□□ 0.87
RAB1A-203ENST00000409784 GTPBP4Q9BZE4 634 aaKnown RBP20.51■□□□□ 0.87
RAB1A-203ENST00000409784 HDAC5Q9UQL6 1122 aa20.51■□□□□ 0.87
RAB1A-203ENST00000409784 LETM1O95202 739 aaPredicted RBP20.5■□□□□ 0.87
RAB1A-203ENST00000409784 ZSCAN20P17040 1043 aaPredicted RBP20.5■□□□□ 0.87
RAB1A-203ENST00000409784 SLC20A2Q08357 652 aa20.5■□□□□ 0.87
RAB1A-203ENST00000409784 POLR3GLQ9BT43 218 aa20.5■□□□□ 0.87
RAB1A-203ENST00000409784 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.5■□□□□ 0.87
RAB1A-203ENST00000409784 AXDND1Q5T1B0 1012 aaPredicted RBP20.49■□□□□ 0.87
RAB1A-203ENST00000409784 TPRNQ4KMQ1 711 aa20.49■□□□□ 0.87
RAB1A-203ENST00000409784 PSEN1P49768 467 aa20.48■□□□□ 0.87
RAB1A-203ENST00000409784 SLC52A1Q9NWF4 448 aa20.48■□□□□ 0.87
RAB1A-203ENST00000409784 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
RAB1A-203ENST00000409784 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
RAB1A-203ENST00000409784 DNTTIP2Q5QJE6 756 aaKnown RBP20.45■□□□□ 0.86
RAB1A-203ENST00000409784 RIPK4P57078 832 aa20.44■□□□□ 0.86
RAB1A-203ENST00000409784 ARID3AQ99856 593 aa20.43■□□□□ 0.86
RAB1A-203ENST00000409784 ESPNB1AK53 854 aa20.42■□□□□ 0.86
RAB1A-203ENST00000409784 PTMSP20962 102 aa20.41■□□□□ 0.86
RAB1A-203ENST00000409784 FRAT2O75474 233 aaPredicted RBP20.41■□□□□ 0.86
RAB1A-203ENST00000409784 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
RAB1A-203ENST00000409784 SMARCA2P51531 1590 aa20.4■□□□□ 0.86
RAB1A-203ENST00000409784 TCERG1O14776 1098 aaKnown RBP20.4■□□□□ 0.86
RAB1A-203ENST00000409784 TMED8Q6PL24 325 aaPredicted RBP20.4■□□□□ 0.86
RAB1A-203ENST00000409784 MCCP23508 829 aa20.39■□□□□ 0.85
RAB1A-203ENST00000409784 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
RAB1A-203ENST00000409784 BACH2Q9BYV9 841 aa20.37■□□□□ 0.85
RAB1A-203ENST00000409784 WDR97A6NE52 1622 aa20.37■□□□□ 0.85
RAB1A-203ENST00000409784 MYCNP04198 464 aaPredicted RBP20.37■□□□□ 0.85
RAB1A-203ENST00000409784 GOLGA3Q08378 1498 aa20.37■□□□□ 0.85
RAB1A-203ENST00000409784 GOLGA6L3A6NEY3 463 aa20.36■□□□□ 0.85
RAB1A-203ENST00000409784 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
RAB1A-203ENST00000409784 CLSTN1O94985 981 aa20.35■□□□□ 0.85
RAB1A-203ENST00000409784 PDE4AP27815 886 aa20.35■□□□□ 0.85
RAB1A-203ENST00000409784 PATL2C9JE40 543 aaKnown RBP20.35■□□□□ 0.85
RAB1A-203ENST00000409784 MS4A1P11836 297 aa20.35■□□□□ 0.85
RAB1A-203ENST00000409784 APPP05067 770 aa20.34■□□□□ 0.85
RAB1A-203ENST00000409784 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
RAB1A-203ENST00000409784 PHF14O94880 888 aa20.33■□□□□ 0.85
RAB1A-203ENST00000409784 XRCC6P12956 609 aaKnown RBP eCLIP20.33■□□□□ 0.85
RAB1A-203ENST00000409784 CEP164Q9UPV0 1460 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 FSD2A1L4K1 749 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 YY1AP1Q9H869 796 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 RNF123Q5XPI4 1314 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
RAB1A-203ENST00000409784 SOX12O15370 315 aa20.31■□□□□ 0.84
RAB1A-203ENST00000409784 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
RAB1A-203ENST00000409784 PLCD4Q9BRC7 762 aa20.31■□□□□ 0.84
RAB1A-203ENST00000409784 TRIM44Q96DX7 344 aaPredicted RBP20.31■□□□□ 0.84
RAB1A-203ENST00000409784 DNAJC2Q99543 621 aaKnown RBP20.31■□□□□ 0.84
RAB1A-203ENST00000409784 CCDC94Q9BW85 323 aaPredicted RBP20.31■□□□□ 0.84
RAB1A-203ENST00000409784 POGKQ9P215 609 aa20.3■□□□□ 0.84
RAB1A-203ENST00000409784 FAM43BQ6ZT52 329 aaPredicted RBP20.29■□□□□ 0.84
RAB1A-203ENST00000409784 FAM13BQ9NYF5 915 aa20.28■□□□□ 0.84
RAB1A-203ENST00000409784 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
RAB1A-203ENST00000409784 E9PSI1 815 aa20.28■□□□□ 0.84
RAB1A-203ENST00000409784 CLIP1P30622 1438 aa20.27■□□□□ 0.84
RAB1A-203ENST00000409784 GEMIN8Q9NWZ8 242 aaKnown RBP20.26■□□□□ 0.83
RAB1A-203ENST00000409784 OFD1O75665 1012 aa20.26■□□□□ 0.83
RAB1A-203ENST00000409784 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.24■□□□□ 0.83
RAB1A-203ENST00000409784 SMG6Q86US8 1419 aaKnown RBP20.23■□□□□ 0.83
RAB1A-203ENST00000409784 RALBP1Q15311 655 aa20.23■□□□□ 0.83
RAB1A-203ENST00000409784 IGSF3O75054 1194 aa20.22■□□□□ 0.83
RAB1A-203ENST00000409784 IRX5P78411 483 aaPredicted RBP20.22■□□□□ 0.83
RAB1A-203ENST00000409784 NGEFQ8N5V2 710 aa20.22■□□□□ 0.83
RAB1A-203ENST00000409784 ZNF592Q92610 1267 aa20.22■□□□□ 0.83
RAB1A-203ENST00000409784 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
RAB1A-203ENST00000409784 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
RAB1A-203ENST00000409784 ZBTB22O15209 634 aa20.2■□□□□ 0.82
RAB1A-203ENST00000409784 CC2D1BQ5T0F9 858 aaKnown RBP20.2■□□□□ 0.82
RAB1A-203ENST00000409784 CARD10Q9BWT7 1032 aa20.2■□□□□ 0.82
RAB1A-203ENST00000409784 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
RAB1A-203ENST00000409784 DYNC1I1O14576 645 aa20.18■□□□□ 0.82
RAB1A-203ENST00000409784 CEP120Q8N960 986 aa20.18■□□□□ 0.82
RAB1A-203ENST00000409784 PANK2Q9BZ23 570 aa20.17■□□□□ 0.82
RAB1A-203ENST00000409784 MRE11P49959 708 aa20.15■□□□□ 0.82
RAB1A-203ENST00000409784 CERS3Q8IU89 383 aa20.15■□□□□ 0.82
RAB1A-203ENST00000409784 CGNQ9P2M7 1197 aaKnown RBP20.14■□□□□ 0.82
RAB1A-203ENST00000409784 SIN3AQ96ST3 1273 aa20.14■□□□□ 0.81
RAB1A-203ENST00000409784 TMEM132AQ24JP5 1023 aa20.12■□□□□ 0.81
RAB1A-203ENST00000409784 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
RAB1A-203ENST00000409784 CCDC88BA6NC98 1476 aa20.12■□□□□ 0.81
RAB1A-203ENST00000409784 EGFL6Q8IUX8 553 aa20.12■□□□□ 0.81
RAB1A-203ENST00000409784 AEBP1Q8IUX7 1158 aa20.11■□□□□ 0.81
RAB1A-203ENST00000409784 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
RAB1A-203ENST00000409784 TMC1Q8TDI8 760 aa20.1■□□□□ 0.81
RAB1A-203ENST00000409784 KIF21BO75037 1637 aa20.1■□□□□ 0.81
RAB1A-203ENST00000409784 NBPF20Q3BBV1 942 aa20.09■□□□□ 0.81
RAB1A-203ENST00000409784 SOGA1O94964 1423 aa20.08■□□□□ 0.81
RAB1A-203ENST00000409784 P3H3Q8IVL6 736 aa20.08■□□□□ 0.8
RAB1A-203ENST00000409784 PHLDB1Q86UU1 1377 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms