RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ARHGAP5Q13017 1502 aa25.8■■□□□ 1.72
SUMO1-208ENST00000409627 FANCAO15360 1455 aa25.78■■□□□ 1.72
SUMO1-208ENST00000409627 NEO1Q92859 1461 aa25.78■■□□□ 1.72
SUMO1-208ENST00000409627 MYOM3Q5VTT5 1437 aa25.77■■□□□ 1.72
SUMO1-208ENST00000409627 PHLDB1Q86UU1 1377 aa25.76■■□□□ 1.71
SUMO1-208ENST00000409627 PPARGC1BQ86YN6 1023 aaKnown RBP25.75■■□□□ 1.71
SUMO1-208ENST00000409627 EFCAB2Q5VUJ9 269 aa25.72■■□□□ 1.71
SUMO1-208ENST00000409627 MIA2Q96PC5 1412 aa25.71■■□□□ 1.71
SUMO1-208ENST00000409627 SAMD9LQ8IVG5 1584 aa25.71■■□□□ 1.71
SUMO1-208ENST00000409627 CFDP1Q9UEE9 299 aaPredicted RBP25.71■■□□□ 1.71
SUMO1-208ENST00000409627 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
SUMO1-208ENST00000409627 ABCC1P33527 1531 aa25.68■■□□□ 1.7
SUMO1-208ENST00000409627 FGD6Q6ZV73 1430 aa25.66■■□□□ 1.7
SUMO1-208ENST00000409627 ADGRL1O94910 1474 aa25.66■■□□□ 1.7
SUMO1-208ENST00000409627 PTPN23Q9H3S7 1636 aa25.65■■□□□ 1.7
SUMO1-208ENST00000409627 PLEKHH2Q8IVE3 1493 aa25.65■■□□□ 1.7
SUMO1-208ENST00000409627 CAMSAP2Q08AD1 1489 aa25.64■■□□□ 1.69
SUMO1-208ENST00000409627 KDM6BO15054 1643 aa25.63■■□□□ 1.69
SUMO1-208ENST00000409627 TCOF1Q13428 1488 aaKnown RBP25.61■■□□□ 1.69
SUMO1-208ENST00000409627 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
SUMO1-208ENST00000409627 KIAA1107Q9UPP5 1409 aa25.61■■□□□ 1.69
SUMO1-208ENST00000409627 SYCP2Q9BX26 1530 aa25.6■■□□□ 1.69
SUMO1-208ENST00000409627 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
SUMO1-208ENST00000409627 RICTORQ6R327 1708 aa25.59■■□□□ 1.69
SUMO1-208ENST00000409627 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.69
SUMO1-208ENST00000409627 DENND4BO75064 1496 aaPredicted RBP25.58■■□□□ 1.69
SUMO1-208ENST00000409627 COL17A1Q9UMD9 1497 aaPredicted RBP25.58■■□□□ 1.69
SUMO1-208ENST00000409627 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
SUMO1-208ENST00000409627 FRMPD1Q5SYB0 1578 aa25.56■■□□□ 1.68
SUMO1-208ENST00000409627 POGZQ7Z3K3 1410 aa25.55■■□□□ 1.68
SUMO1-208ENST00000409627 ARHGEF5Q12774 1597 aa25.55■■□□□ 1.68
SUMO1-208ENST00000409627 RRBP1Q9P2E9 1410 aaKnown RBP25.54■■□□□ 1.68
SUMO1-208ENST00000409627 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
SUMO1-208ENST00000409627 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
SUMO1-208ENST00000409627 KDM5CP41229 1560 aa25.52■■□□□ 1.68
SUMO1-208ENST00000409627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.5■■□□□ 1.671e-7■■■■■ 38.4
SUMO1-208ENST00000409627 TRAPPC8Q9Y2L5 1435 aa25.5■■□□□ 1.67
SUMO1-208ENST00000409627 ZMYM4Q5VZL5 1548 aa25.49■■□□□ 1.67
SUMO1-208ENST00000409627 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
SUMO1-208ENST00000409627 DNMT1P26358 1616 aaKnown RBP25.48■■□□□ 1.67
SUMO1-208ENST00000409627 CCDC141Q6ZP82 1450 aa25.48■■□□□ 1.67
SUMO1-208ENST00000409627 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
SUMO1-208ENST00000409627 RAPGEF3O95398 923 aa25.46■■□□□ 1.67
SUMO1-208ENST00000409627 RSPH4AQ5TD94 716 aa25.46■■□□□ 1.67
SUMO1-208ENST00000409627 HECW2Q9P2P5 1572 aa25.44■■□□□ 1.66
SUMO1-208ENST00000409627 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
SUMO1-208ENST00000409627 AFAP1Q8N556 730 aa25.43■■□□□ 1.66
SUMO1-208ENST00000409627 INO80Q9ULG1 1556 aaPredicted RBP25.42■■□□□ 1.66
SUMO1-208ENST00000409627 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
SUMO1-208ENST00000409627 DAPK1P53355 1430 aa25.41■■□□□ 1.66
SUMO1-208ENST00000409627 MAGI2Q86UL8 1455 aa25.4■■□□□ 1.66
SUMO1-208ENST00000409627 MLH3Q9UHC1 1453 aa25.4■■□□□ 1.66
SUMO1-208ENST00000409627 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
SUMO1-208ENST00000409627 ABCC5O15440 1437 aa25.4■■□□□ 1.66
SUMO1-208ENST00000409627 ZFYVE16Q7Z3T8 1539 aa25.39■■□□□ 1.66
SUMO1-208ENST00000409627 KIDINS220Q9ULH0 1771 aa25.39■■□□□ 1.65
SUMO1-208ENST00000409627 ATP7AQ04656 1500 aa25.37■■□□□ 1.65
SUMO1-208ENST00000409627 ARHGEF40Q8TER5 1519 aa25.36■■□□□ 1.65
SUMO1-208ENST00000409627 RTEL1-TNFRSF6BF6WH68 1400 aa25.36■■□□□ 1.65
SUMO1-208ENST00000409627 SPAG9O60271 1321 aaKnown RBP25.36■■□□□ 1.65
SUMO1-208ENST00000409627 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
SUMO1-208ENST00000409627 C9orf84Q5VXU9 1444 aa25.34■■□□□ 1.65
SUMO1-208ENST00000409627 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
SUMO1-208ENST00000409627 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
SUMO1-208ENST00000409627 ABCA6Q8N139 1617 aa25.33■■□□□ 1.65
SUMO1-208ENST00000409627 PLXNC1O60486 1568 aa25.31■■□□□ 1.64
SUMO1-208ENST00000409627 DIP2CQ9Y2E4 1556 aa25.31■■□□□ 1.64
SUMO1-208ENST00000409627 YEATS2Q9ULM3 1422 aa25.3■■□□□ 1.64
SUMO1-208ENST00000409627 PTPRKQ15262 1439 aa25.29■■□□□ 1.64
SUMO1-208ENST00000409627 ADGRL2O95490 1459 aa25.28■■□□□ 1.64
SUMO1-208ENST00000409627 MYT1LQ9UL68 1186 aa25.26■■□□□ 1.63
SUMO1-208ENST00000409627 REREQ9P2R6 1566 aa25.25■■□□□ 1.63
SUMO1-208ENST00000409627 ATP10AO60312 1499 aa25.24■■□□□ 1.63
SUMO1-208ENST00000409627 ROCK1Q13464 1354 aa25.22■■□□□ 1.63
SUMO1-208ENST00000409627 ITGAEP38570 1179 aa25.22■■□□□ 1.63
SUMO1-208ENST00000409627 ANKRD30AQ9BXX3 1397 aa25.21■■□□□ 1.63
SUMO1-208ENST00000409627 NCOA1Q15788 1441 aa25.2■■□□□ 1.63
SUMO1-208ENST00000409627 CHIC2Q9UKJ5 165 aa25.2■■□□□ 1.62
SUMO1-208ENST00000409627 A2MP01023 1474 aa25.18■■□□□ 1.62
SUMO1-208ENST00000409627 DUOX2Q9NRD8 1548 aa25.17■■□□□ 1.62
SUMO1-208ENST00000409627 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
SUMO1-208ENST00000409627 KIF15Q9NS87 1388 aa25.17■■□□□ 1.62
SUMO1-208ENST00000409627 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.62
SUMO1-208ENST00000409627 AGLP35573 1532 aa25.14■■□□□ 1.62
SUMO1-208ENST00000409627 DHX29Q7Z478 1369 aaKnown RBP25.14■■□□□ 1.61
SUMO1-208ENST00000409627 EIF2AK4Q9P2K8 1649 aaKnown RBP25.13■■□□□ 1.61
SUMO1-208ENST00000409627 BCORL1Q5H9F3 1711 aa25.13■■□□□ 1.61
SUMO1-208ENST00000409627 RRP7BPQ9NSQ0 103 aa25.12■■□□□ 1.61
SUMO1-208ENST00000409627 TRIM26Q12899 539 aaPredicted RBP25.11■■□□□ 1.61
SUMO1-208ENST00000409627 ERBINQ96RT1 1412 aa25.11■■□□□ 1.61
SUMO1-208ENST00000409627 HFM1A2PYH4 1435 aa25.08■■□□□ 1.61
SUMO1-208ENST00000409627 NAIPQ13075 1403 aa25.06■■□□□ 1.6
SUMO1-208ENST00000409627 ANKRD50Q9ULJ7 1429 aa25.05■■□□□ 1.6
SUMO1-208ENST00000409627 RNF17Q9BXT8 1623 aaKnown RBP25.04■■□□□ 1.6
SUMO1-208ENST00000409627 DEPDC5O75140 1603 aa25.01■■□□□ 1.59
SUMO1-208ENST00000409627 ARID4BQ4LE39 1312 aaPredicted RBP25■■□□□ 1.59
SUMO1-208ENST00000409627 KIF3BO15066 747 aa24.97■■□□□ 1.59
SUMO1-208ENST00000409627 MROH1Q8NDA8 1641 aa24.97■■□□□ 1.59
SUMO1-208ENST00000409627 UNC13BO14795 1591 aa24.97■■□□□ 1.59
SUMO1-208ENST00000409627 PRDM15P57071 1507 aaPredicted RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms