RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 ARHGAP35Q9NRY4 1499 aa10.04□□□□□ -0.8
SH3D19-203ENST00000409598 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
SH3D19-203ENST00000409598 PIP4K2BP78356 416 aa10.03□□□□□ -0.8
SH3D19-203ENST00000409598 DNMBPQ6XZF7 1577 aa10.03□□□□□ -0.8
SH3D19-203ENST00000409598 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
SH3D19-203ENST00000409598 PNNQ9H307 717 aaKnown RBP10.01□□□□□ -0.81
SH3D19-203ENST00000409598 TEX14Q8IWB6 1497 aa10.01□□□□□ -0.81
SH3D19-203ENST00000409598 NUP155O75694 1391 aa10.01□□□□□ -0.81
SH3D19-203ENST00000409598 KNSTRNQ9Y448 316 aa10□□□□□ -0.81
SH3D19-203ENST00000409598 SAFB2Q14151 953 aaKnown RBP eCLIP10□□□□□ -0.81
SH3D19-203ENST00000409598 UACAQ9BZF9 1416 aa10□□□□□ -0.81
SH3D19-203ENST00000409598 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
SH3D19-203ENST00000409598 IGF1RP08069 1367 aa10□□□□□ -0.81
SH3D19-203ENST00000409598 POLA1P09884 1462 aaPredicted RBP9.99□□□□□ -0.81
SH3D19-203ENST00000409598 SOX12O15370 315 aa9.98□□□□□ -0.81
SH3D19-203ENST00000409598 TOM1O60784 492 aa9.98□□□□□ -0.81
SH3D19-203ENST00000409598 MSH5O43196 834 aa9.98□□□□□ -0.81
SH3D19-203ENST00000409598 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
SH3D19-203ENST00000409598 CD109Q6YHK3 1445 aa9.98□□□□□ -0.81
SH3D19-203ENST00000409598 PSME1Q06323 249 aa9.97□□□□□ -0.81
SH3D19-203ENST00000409598 PLB1Q6P1J6 1458 aa9.97□□□□□ -0.81
SH3D19-203ENST00000409598 BCL11AQ9H165 835 aa9.97□□□□□ -0.81
SH3D19-203ENST00000409598 PKD2Q13563 968 aa9.96□□□□□ -0.81
SH3D19-203ENST00000409598 DCAF11Q8TEB1 546 aa9.96□□□□□ -0.82
SH3D19-203ENST00000409598 CHMP4AQ9BY43 222 aa9.96□□□□□ -0.82
SH3D19-203ENST00000409598 MAPK8IP3Q9UPT6 1336 aa9.96□□□□□ -0.82
SH3D19-203ENST00000409598 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
SH3D19-203ENST00000409598 AKNAQ7Z591 1439 aa9.95□□□□□ -0.82
SH3D19-203ENST00000409598 EIF3AQ14152 1382 aaKnown RBP9.95□□□□□ -0.82
SH3D19-203ENST00000409598 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
SH3D19-203ENST00000409598 TMF1P82094 1093 aa9.95□□□□□ -0.82
SH3D19-203ENST00000409598 TERF2IPQ9NYB0 399 aa9.94□□□□□ -0.82
SH3D19-203ENST00000409598 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
SH3D19-203ENST00000409598 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
SH3D19-203ENST00000409598 UBAP1LF5GYI3 381 aa9.93□□□□□ -0.82
SH3D19-203ENST00000409598 WASHC2AQ641Q2 1341 aa9.93□□□□□ -0.82
SH3D19-203ENST00000409598 PHLDB1Q86UU1 1377 aa9.93□□□□□ -0.82
SH3D19-203ENST00000409598 RAPGEF3O95398 923 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 KLHL34Q8N239 644 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-203ENST00000409598 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-203ENST00000409598 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-203ENST00000409598 RTF1Q92541 710 aaKnown RBP9.91□□□□□ -0.82
SH3D19-203ENST00000409598 PPP6R1Q9UPN7 881 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 G3V3G9 751 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
SH3D19-203ENST00000409598 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
SH3D19-203ENST00000409598 AMPHP49418 695 aa9.9□□□□□ -0.82
SH3D19-203ENST00000409598 PRDM2Q13029 1718 aa9.9□□□□□ -0.83
SH3D19-203ENST00000409598 MYH16Q9H6N6 1097 aa9.89□□□□□ -0.83
SH3D19-203ENST00000409598 GPRASP1Q5JY77 1395 aa9.89□□□□□ -0.83
SH3D19-203ENST00000409598 SCAPERQ9BY12 1400 aa9.89□□□□□ -0.83
SH3D19-203ENST00000409598 AFAP1Q8N556 730 aa9.88□□□□□ -0.83
SH3D19-203ENST00000409598 GRIN2AQ12879 1464 aa9.88□□□□□ -0.83
SH3D19-203ENST00000409598 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
SH3D19-203ENST00000409598 GTF2E1P29083 439 aaPredicted RBP9.87□□□□□ -0.83
SH3D19-203ENST00000409598 VPS8Q8N3P4 1428 aa9.87□□□□□ -0.83
SH3D19-203ENST00000409598 SLC52A1Q9NWF4 448 aa9.86□□□□□ -0.83
SH3D19-203ENST00000409598 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.86□□□□□ -0.83
SH3D19-203ENST00000409598 DENND4BO75064 1496 aaPredicted RBP9.85□□□□□ -0.83
SH3D19-203ENST00000409598 ABCA10Q8WWZ4 1543 aa9.85□□□□□ -0.83
SH3D19-203ENST00000409598 U2SURPO15042 1029 aaKnown RBP9.84□□□□□ -0.83
SH3D19-203ENST00000409598 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
SH3D19-203ENST00000409598 ZNF330Q9Y3S2 320 aaPredicted RBP9.84□□□□□ -0.83
SH3D19-203ENST00000409598 MYOM3Q5VTT5 1437 aa9.84□□□□□ -0.83
SH3D19-203ENST00000409598 RTL5Q5HYW3 569 aaPredicted RBP9.84□□□□□ -0.83
SH3D19-203ENST00000409598 MORC1Q86VD1 984 aa9.84□□□□□ -0.83
SH3D19-203ENST00000409598 PPP1R1BQ9UD71 204 aaPredicted RBP9.84□□□□□ -0.84
SH3D19-203ENST00000409598 CCDC144AA2RUR9 1427 aa9.82□□□□□ -0.84
SH3D19-203ENST00000409598 URB2Q14146 1524 aaKnown RBP9.82□□□□□ -0.84
SH3D19-203ENST00000409598 DHX57Q6P158 1386 aaKnown RBP9.82□□□□□ -0.84
SH3D19-203ENST00000409598 ESCO1Q5FWF5 840 aa9.82□□□□□ -0.84
SH3D19-203ENST00000409598 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
SH3D19-203ENST00000409598 TNNT2P45379 298 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-203ENST00000409598 ZNF608Q9ULD9 1512 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-203ENST00000409598 EVC2Q86UK5 1308 aa9.8□□□□□ -0.84
SH3D19-203ENST00000409598 SYTL4Q96C24 671 aaPredicted RBP9.8□□□□□ -0.84
SH3D19-203ENST00000409598 ERICH3Q5RHP9 1530 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 KIF15Q9NS87 1388 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 C1orf141Q5JVX7 400 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 NGLY1Q96IV0 654 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 LTV1Q96GA3 475 aaPredicted RBP9.79□□□□□ -0.84
SH3D19-203ENST00000409598 COG3Q96JB2 828 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 MPHOSPH9Q99550 1183 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 TRAK1Q9UPV9 953 aa9.79□□□□□ -0.84
SH3D19-203ENST00000409598 CALD1Q05682 793 aaKnown RBP9.78□□□□□ -0.84
SH3D19-203ENST00000409598 LAS1LQ9Y4W2 734 aaKnown RBP9.78□□□□□ -0.84
SH3D19-203ENST00000409598 SETD5Q9C0A6 1442 aa9.77□□□□□ -0.85
SH3D19-203ENST00000409598 RAPGEF4Q8WZA2 1011 aa9.77□□□□□ -0.85
SH3D19-203ENST00000409598 ADGRL1O94910 1474 aa9.77□□□□□ -0.85
SH3D19-203ENST00000409598 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.85
SH3D19-203ENST00000409598 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
SH3D19-203ENST00000409598 TROQ12816 1431 aaPredicted RBP9.77□□□□□ -0.85
SH3D19-203ENST00000409598 LRPPRCP42704 1394 aaKnown RBP9.76□□□□□ -0.85
SH3D19-203ENST00000409598 CUX1P39880 1505 aa9.76□□□□□ -0.85
SH3D19-203ENST00000409598 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
SH3D19-203ENST00000409598 IQGAP2Q13576 1575 aa9.76□□□□□ -0.85
SH3D19-203ENST00000409598 HDAC5Q9UQL6 1122 aa9.76□□□□□ -0.85
SH3D19-203ENST00000409598 ANP32EQ9BTT0 268 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms