RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 TCOF1Q13428 1488 aaKnown RBP23.59■■□□□ 1.37
SHANK2-204ENST00000409530 CHIC2Q9UKJ5 165 aa23.56■■□□□ 1.36
SHANK2-204ENST00000409530 ABCA9Q8IUA7 1624 aa23.55■■□□□ 1.36
SHANK2-204ENST00000409530 MAPKBP1O60336 1514 aa23.55■■□□□ 1.36
SHANK2-204ENST00000409530 SAMD9LQ8IVG5 1584 aa23.54■■□□□ 1.36
SHANK2-204ENST00000409530 PTPRKQ15262 1439 aa23.54■■□□□ 1.36
SHANK2-204ENST00000409530 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
SHANK2-204ENST00000409530 DNMT1P26358 1616 aaKnown RBP23.51■■□□□ 1.35
SHANK2-204ENST00000409530 SYCP2Q9BX26 1530 aa23.49■■□□□ 1.35
SHANK2-204ENST00000409530 PLCH2O75038 1416 aa23.49■■□□□ 1.35
SHANK2-204ENST00000409530 DAPK1P53355 1430 aa23.49■■□□□ 1.35
SHANK2-204ENST00000409530 HNRNPMP52272 730 aaKnown RBP eCLIP23.48■■□□□ 1.354e-9■■■■■ 39.3
SHANK2-204ENST00000409530 CROCC2H7BZ55 1655 aa23.45■■□□□ 1.34
SHANK2-204ENST00000409530 ABCC5O15440 1437 aa23.44■■□□□ 1.34
SHANK2-204ENST00000409530 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
SHANK2-204ENST00000409530 FANCAO15360 1455 aa23.44■■□□□ 1.34
SHANK2-204ENST00000409530 CD109Q6YHK3 1445 aa23.43■■□□□ 1.34
SHANK2-204ENST00000409530 DIP2BQ9P265 1576 aa23.43■■□□□ 1.34
SHANK2-204ENST00000409530 EFCAB2Q5VUJ9 269 aa23.42■■□□□ 1.34
SHANK2-204ENST00000409530 DNAJC5Q9H3Z4 198 aa23.42■■□□□ 1.34
SHANK2-204ENST00000409530 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
SHANK2-204ENST00000409530 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
SHANK2-204ENST00000409530 ABCC1P33527 1531 aa23.39■■□□□ 1.33
SHANK2-204ENST00000409530 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
SHANK2-204ENST00000409530 ARHGEF12Q9NZN5 1544 aa23.38■■□□□ 1.33
SHANK2-204ENST00000409530 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
SHANK2-204ENST00000409530 MAP3K4Q9Y6R4 1608 aa23.37■■□□□ 1.33
SHANK2-204ENST00000409530 ADGBQ8N7X0 1667 aa23.37■■□□□ 1.33
SHANK2-204ENST00000409530 SETD5Q9C0A6 1442 aa23.36■■□□□ 1.33
SHANK2-204ENST00000409530 ARAP3Q8WWN8 1544 aa23.36■■□□□ 1.33
SHANK2-204ENST00000409530 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
SHANK2-204ENST00000409530 MBD5Q9P267 1494 aa23.36■■□□□ 1.33
SHANK2-204ENST00000409530 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
SHANK2-204ENST00000409530 ADGRL1O94910 1474 aa23.34■■□□□ 1.33
SHANK2-204ENST00000409530 KIF13AQ9H1H9 1805 aa23.34■■□□□ 1.33
SHANK2-204ENST00000409530 C9orf84Q5VXU9 1444 aa23.34■■□□□ 1.33
SHANK2-204ENST00000409530 GCC2Q8IWJ2 1684 aa23.33■■□□□ 1.33
SHANK2-204ENST00000409530 PLEKHH2Q8IVE3 1493 aa23.33■■□□□ 1.33
SHANK2-204ENST00000409530 HFM1A2PYH4 1435 aa23.32■■□□□ 1.32
SHANK2-204ENST00000409530 NAIPQ13075 1403 aa23.32■■□□□ 1.32
SHANK2-204ENST00000409530 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
SHANK2-204ENST00000409530 TSPY4P0CV99 314 aa23.31■■□□□ 1.32
SHANK2-204ENST00000409530 TSPY10P0CW01 314 aa23.31■■□□□ 1.32
SHANK2-204ENST00000409530 TRAPPC8Q9Y2L5 1435 aa23.31■■□□□ 1.32
SHANK2-204ENST00000409530 GLI2P10070 1586 aa23.31■■□□□ 1.32
SHANK2-204ENST00000409530 KDM6BO15054 1643 aa23.31■■□□□ 1.32
SHANK2-204ENST00000409530 CFAP74Q9C0B2 1584 aa23.3■■□□□ 1.32
SHANK2-204ENST00000409530 SCAPERQ9BY12 1400 aa23.29■■□□□ 1.32
SHANK2-204ENST00000409530 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
SHANK2-204ENST00000409530 SHANK2Q9UPX8 1470 aa23.28■■□□□ 1.32
SHANK2-204ENST00000409530 AFAP1Q8N556 730 aa23.27■■□□□ 1.32
SHANK2-204ENST00000409530 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
SHANK2-204ENST00000409530 ANKRD30AQ9BXX3 1397 aa23.24■■□□□ 1.31
SHANK2-204ENST00000409530 PPRC1Q5VV67 1664 aaKnown RBP23.24■■□□□ 1.31
SHANK2-204ENST00000409530 NCOA1Q15788 1441 aa23.23■■□□□ 1.31
SHANK2-204ENST00000409530 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
SHANK2-204ENST00000409530 ADGRL2O95490 1459 aa23.22■■□□□ 1.31
SHANK2-204ENST00000409530 TRHP20396 242 aaPredicted RBP23.21■■□□□ 1.31
SHANK2-204ENST00000409530 KIF15Q9NS87 1388 aa23.21■■□□□ 1.31
SHANK2-204ENST00000409530 SPAG9O60271 1321 aaKnown RBP23.19■■□□□ 1.3
SHANK2-204ENST00000409530 RSPH4AQ5TD94 716 aa23.18■■□□□ 1.3
SHANK2-204ENST00000409530 NEO1Q92859 1461 aa23.18■■□□□ 1.3
SHANK2-204ENST00000409530 MAST1Q9Y2H9 1570 aa23.18■■□□□ 1.3
SHANK2-204ENST00000409530 DHX57Q6P158 1386 aaKnown RBP23.18■■□□□ 1.3
SHANK2-204ENST00000409530 TRIM52Q96A61 297 aa23.18■■□□□ 1.3
SHANK2-204ENST00000409530 ZFYVE16Q7Z3T8 1539 aa23.18■■□□□ 1.3
SHANK2-204ENST00000409530 RAPGEF3O95398 923 aa23.17■■□□□ 1.3
SHANK2-204ENST00000409530 POGZQ7Z3K3 1410 aa23.15■■□□□ 1.3
SHANK2-204ENST00000409530 ZNF518AQ6AHZ1 1483 aa23.15■■□□□ 1.3
SHANK2-204ENST00000409530 ATP7AQ04656 1500 aa23.15■■□□□ 1.3
SHANK2-204ENST00000409530 PLXNC1O60486 1568 aa23.14■■□□□ 1.29
SHANK2-204ENST00000409530 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
SHANK2-204ENST00000409530 INO80Q9ULG1 1556 aaPredicted RBP23.13■■□□□ 1.29
SHANK2-204ENST00000409530 TEX14Q8IWB6 1497 aa23.13■■□□□ 1.29
SHANK2-204ENST00000409530 HRCP23327 699 aa23.13■■□□□ 1.29
SHANK2-204ENST00000409530 DENND4BO75064 1496 aaPredicted RBP23.12■■□□□ 1.29
SHANK2-204ENST00000409530 RICTORQ6R327 1708 aa23.1■■□□□ 1.29
SHANK2-204ENST00000409530 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
SHANK2-204ENST00000409530 HECW2Q9P2P5 1572 aa23.09■■□□□ 1.29
SHANK2-204ENST00000409530 KDM5CP41229 1560 aa23.08■■□□□ 1.28
SHANK2-204ENST00000409530 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
SHANK2-204ENST00000409530 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
SHANK2-204ENST00000409530 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
SHANK2-204ENST00000409530 ABCA6Q8N139 1617 aa23.03■■□□□ 1.28
SHANK2-204ENST00000409530 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.02■■□□□ 1.28
SHANK2-204ENST00000409530 FOXD1Q16676 465 aa22.99■■□□□ 1.27
SHANK2-204ENST00000409530 YEATS2Q9ULM3 1422 aa22.98■■□□□ 1.27
SHANK2-204ENST00000409530 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
SHANK2-204ENST00000409530 NUP155O75694 1391 aa22.97■■□□□ 1.27
SHANK2-204ENST00000409530 ERBINQ96RT1 1412 aa22.97■■□□□ 1.27
SHANK2-204ENST00000409530 MLH3Q9UHC1 1453 aa22.97■■□□□ 1.27
SHANK2-204ENST00000409530 SLC4A1APQ9BWU0 796 aaKnown RBP22.96■■□□□ 1.27
SHANK2-204ENST00000409530 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
SHANK2-204ENST00000409530 DIP2CQ9Y2E4 1556 aa22.95■■□□□ 1.26
SHANK2-204ENST00000409530 PZPP20742 1482 aa22.94■■□□□ 1.26
SHANK2-204ENST00000409530 A2MP01023 1474 aa22.93■■□□□ 1.26
SHANK2-204ENST00000409530 UNC13BO14795 1591 aa22.93■■□□□ 1.26
SHANK2-204ENST00000409530 KIF3BO15066 747 aa22.92■■□□□ 1.26
SHANK2-204ENST00000409530 NEUROD1Q13562 356 aa22.92■■□□□ 1.26
SHANK2-204ENST00000409530 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms