RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 SUPT6HQ7KZ85 1726 aaKnown RBP23.21■■□□□ 1.31
SUMO1-207ENST00000409498 CDC42BPBQ9Y5S2 1711 aa23.21■■□□□ 1.31
SUMO1-207ENST00000409498 CDC42BPAQ5VT25 1732 aa23.2■■□□□ 1.3
SUMO1-207ENST00000409498 AKNAQ7Z591 1439 aa23.19■■□□□ 1.3
SUMO1-207ENST00000409498 EFCAB2Q5VUJ9 269 aa23.19■■□□□ 1.3
SUMO1-207ENST00000409498 NCOA2Q15596 1464 aa23.18■■□□□ 1.3
SUMO1-207ENST00000409498 CCNB3Q8WWL7 1395 aa23.15■■□□□ 1.3
SUMO1-207ENST00000409498 ARHGAP5Q13017 1502 aa23.15■■□□□ 1.3
SUMO1-207ENST00000409498 ITSN2Q9NZM3 1697 aa23.11■■□□□ 1.29
SUMO1-207ENST00000409498 ADGRL1O94910 1474 aa23.1■■□□□ 1.29
SUMO1-207ENST00000409498 DENND4BO75064 1496 aaPredicted RBP23.09■■□□□ 1.29
SUMO1-207ENST00000409498 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
SUMO1-207ENST00000409498 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
SUMO1-207ENST00000409498 RICTORQ6R327 1708 aa23.06■■□□□ 1.28
SUMO1-207ENST00000409498 FRMPD1Q5SYB0 1578 aa23.06■■□□□ 1.28
SUMO1-207ENST00000409498 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
SUMO1-207ENST00000409498 ABCC1P33527 1531 aa23.05■■□□□ 1.28
SUMO1-207ENST00000409498 KIAA1107Q9UPP5 1409 aa23.05■■□□□ 1.28
SUMO1-207ENST00000409498 POGZQ7Z3K3 1410 aa23.03■■□□□ 1.28
SUMO1-207ENST00000409498 MIA2Q96PC5 1412 aa23.03■■□□□ 1.28
SUMO1-207ENST00000409498 RAPGEF3O95398 923 aa23.03■■□□□ 1.28
SUMO1-207ENST00000409498 PLEKHH2Q8IVE3 1493 aa23.03■■□□□ 1.28
SUMO1-207ENST00000409498 MYOM3Q5VTT5 1437 aa23.02■■□□□ 1.28
SUMO1-207ENST00000409498 ARHGEF12Q9NZN5 1544 aa23.02■■□□□ 1.28
SUMO1-207ENST00000409498 ZMYM4Q5VZL5 1548 aa23.01■■□□□ 1.27
SUMO1-207ENST00000409498 ZNF518AQ6AHZ1 1483 aa22.99■■□□□ 1.27
SUMO1-207ENST00000409498 KDM5CP41229 1560 aa22.98■■□□□ 1.27
SUMO1-207ENST00000409498 ZNF777Q9ULD5 760 aaPredicted RBP22.98■■□□□ 1.27
SUMO1-207ENST00000409498 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
SUMO1-207ENST00000409498 TRAPPC8Q9Y2L5 1435 aa22.96■■□□□ 1.27
SUMO1-207ENST00000409498 MBD5Q9P267 1494 aa22.96■■□□□ 1.27
SUMO1-207ENST00000409498 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
SUMO1-207ENST00000409498 ZNF644Q9H582 1327 aaPredicted RBP22.95■■□□□ 1.26
SUMO1-207ENST00000409498 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
SUMO1-207ENST00000409498 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
SUMO1-207ENST00000409498 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
SUMO1-207ENST00000409498 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
SUMO1-207ENST00000409498 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
SUMO1-207ENST00000409498 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
SUMO1-207ENST00000409498 TCOF1Q13428 1488 aaKnown RBP22.9■■□□□ 1.26
SUMO1-207ENST00000409498 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.25
SUMO1-207ENST00000409498 ARHGEF40Q8TER5 1519 aa22.87■■□□□ 1.25
SUMO1-207ENST00000409498 PTPN23Q9H3S7 1636 aa22.87■■□□□ 1.25
SUMO1-207ENST00000409498 HECW2Q9P2P5 1572 aa22.87■■□□□ 1.25
SUMO1-207ENST00000409498 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
SUMO1-207ENST00000409498 YEATS2Q9ULM3 1422 aa22.84■■□□□ 1.25
SUMO1-207ENST00000409498 CCDC141Q6ZP82 1450 aa22.84■■□□□ 1.25
SUMO1-207ENST00000409498 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.24
SUMO1-207ENST00000409498 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
SUMO1-207ENST00000409498 SPAG9O60271 1321 aaKnown RBP22.82■■□□□ 1.24
SUMO1-207ENST00000409498 INO80Q9ULG1 1556 aaPredicted RBP22.81■■□□□ 1.24
SUMO1-207ENST00000409498 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
SUMO1-207ENST00000409498 ATP10AO60312 1499 aa22.8■■□□□ 1.24
SUMO1-207ENST00000409498 REREQ9P2R6 1566 aa22.79■■□□□ 1.24
SUMO1-207ENST00000409498 DIP2CQ9Y2E4 1556 aa22.79■■□□□ 1.24
SUMO1-207ENST00000409498 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
SUMO1-207ENST00000409498 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.241e-7■■■■■ 38.4
SUMO1-207ENST00000409498 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.24
SUMO1-207ENST00000409498 ABCA6Q8N139 1617 aa22.77■■□□□ 1.24
SUMO1-207ENST00000409498 C9orf84Q5VXU9 1444 aa22.76■■□□□ 1.23
SUMO1-207ENST00000409498 DNMT1P26358 1616 aaKnown RBP22.75■■□□□ 1.23
SUMO1-207ENST00000409498 ABCC5O15440 1437 aa22.75■■□□□ 1.23
SUMO1-207ENST00000409498 TSPY4P0CV99 314 aa22.75■■□□□ 1.23
SUMO1-207ENST00000409498 TSPY10P0CW01 314 aa22.75■■□□□ 1.23
SUMO1-207ENST00000409498 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
SUMO1-207ENST00000409498 SHANK2Q9UPX8 1470 aa22.73■■□□□ 1.23
SUMO1-207ENST00000409498 DAPK1P53355 1430 aa22.73■■□□□ 1.23
SUMO1-207ENST00000409498 MYT1LQ9UL68 1186 aa22.72■■□□□ 1.23
SUMO1-207ENST00000409498 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
SUMO1-207ENST00000409498 SIGLEC1Q9BZZ2 1709 aa22.71■■□□□ 1.23
SUMO1-207ENST00000409498 AGLP35573 1532 aa22.7■■□□□ 1.22
SUMO1-207ENST00000409498 ADGBQ8N7X0 1667 aa22.68■■□□□ 1.22
SUMO1-207ENST00000409498 PLXNC1O60486 1568 aa22.67■■□□□ 1.22
SUMO1-207ENST00000409498 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
SUMO1-207ENST00000409498 A2MP01023 1474 aa22.66■■□□□ 1.22
SUMO1-207ENST00000409498 BCORL1Q5H9F3 1711 aa22.65■■□□□ 1.22
SUMO1-207ENST00000409498 DHX29Q7Z478 1369 aaKnown RBP22.64■■□□□ 1.22
SUMO1-207ENST00000409498 KDM4FA0A1W2PPD8 638 aa22.64■■□□□ 1.21
SUMO1-207ENST00000409498 ADAMTSL3P82987 1691 aa22.62■■□□□ 1.21
SUMO1-207ENST00000409498 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
SUMO1-207ENST00000409498 ARID4BQ4LE39 1312 aaPredicted RBP22.61■■□□□ 1.21
SUMO1-207ENST00000409498 PTPRKQ15262 1439 aa22.6■■□□□ 1.21
SUMO1-207ENST00000409498 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
SUMO1-207ENST00000409498 ANKRD30AQ9BXX3 1397 aa22.57■■□□□ 1.2
SUMO1-207ENST00000409498 DUOX2Q9NRD8 1548 aa22.57■■□□□ 1.2
SUMO1-207ENST00000409498 ROCK1Q13464 1354 aa22.56■■□□□ 1.2
SUMO1-207ENST00000409498 KIF15Q9NS87 1388 aa22.54■■□□□ 1.2
SUMO1-207ENST00000409498 CHIC2Q9UKJ5 165 aa22.53■■□□□ 1.2
SUMO1-207ENST00000409498 EIF2AK4Q9P2K8 1649 aaKnown RBP22.53■■□□□ 1.2
SUMO1-207ENST00000409498 PPP6R1Q9UPN7 881 aa22.52■■□□□ 1.2
SUMO1-207ENST00000409498 ERBINQ96RT1 1412 aa22.51■■□□□ 1.19
SUMO1-207ENST00000409498 RRP7BPQ9NSQ0 103 aa22.51■■□□□ 1.19
SUMO1-207ENST00000409498 MADDQ8WXG6 1647 aa22.5■■□□□ 1.19
SUMO1-207ENST00000409498 MLECQ14165 292 aa22.48■■□□□ 1.19
SUMO1-207ENST00000409498 KIF3BO15066 747 aa22.47■■□□□ 1.19
SUMO1-207ENST00000409498 FER1L4A9Z1Z3 1794 aa22.47■■□□□ 1.19
SUMO1-207ENST00000409498 RNF17Q9BXT8 1623 aaKnown RBP22.46■■□□□ 1.19
SUMO1-207ENST00000409498 FAM135AQ9P2D6 1515 aa22.46■■□□□ 1.19
SUMO1-207ENST00000409498 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
SUMO1-207ENST00000409498 PTPRMP28827 1452 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms