RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
RAB1C-201ENST00000409159 AKNAQ7Z591 1439 aa16.83■□□□□ 0.28
RAB1C-201ENST00000409159 ABCA9Q8IUA7 1624 aa16.83■□□□□ 0.28
RAB1C-201ENST00000409159 PREX2Q70Z35 1606 aa16.82■□□□□ 0.28
RAB1C-201ENST00000409159 CAMSAP2Q08AD1 1489 aa16.82■□□□□ 0.28
RAB1C-201ENST00000409159 ROCK1Q13464 1354 aa16.82■□□□□ 0.28
RAB1C-201ENST00000409159 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
RAB1C-201ENST00000409159 DAPK1P53355 1430 aa16.79■□□□□ 0.28
RAB1C-201ENST00000409159 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
RAB1C-201ENST00000409159 ABCC5O15440 1437 aa16.79■□□□□ 0.28
RAB1C-201ENST00000409159 ZNF644Q9H582 1327 aaPredicted RBP16.78■□□□□ 0.28
RAB1C-201ENST00000409159 ARHGAP5Q13017 1502 aa16.78■□□□□ 0.28
RAB1C-201ENST00000409159 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
RAB1C-201ENST00000409159 GLI2P10070 1586 aa16.77■□□□□ 0.28
RAB1C-201ENST00000409159 ITGAEP38570 1179 aa16.77■□□□□ 0.28
RAB1C-201ENST00000409159 SHANK2Q9UPX8 1470 aa16.77■□□□□ 0.28
RAB1C-201ENST00000409159 PTPRKQ15262 1439 aa16.77■□□□□ 0.27
RAB1C-201ENST00000409159 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.27
RAB1C-201ENST00000409159 ARHGEF5Q12774 1597 aa16.77■□□□□ 0.27
RAB1C-201ENST00000409159 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
RAB1C-201ENST00000409159 DNAJC5Q9H3Z4 198 aa16.76■□□□□ 0.27
RAB1C-201ENST00000409159 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
RAB1C-201ENST00000409159 DNMT1P26358 1616 aaKnown RBP16.76■□□□□ 0.27
RAB1C-201ENST00000409159 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
RAB1C-201ENST00000409159 CD109Q6YHK3 1445 aa16.75■□□□□ 0.27
RAB1C-201ENST00000409159 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
RAB1C-201ENST00000409159 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
RAB1C-201ENST00000409159 ADGRL2O95490 1459 aa16.73■□□□□ 0.27
RAB1C-201ENST00000409159 CDC42BPBQ9Y5S2 1711 aa16.73■□□□□ 0.27
RAB1C-201ENST00000409159 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
RAB1C-201ENST00000409159 FANCAO15360 1455 aa16.72■□□□□ 0.27
RAB1C-201ENST00000409159 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
RAB1C-201ENST00000409159 NAIPQ13075 1403 aa16.7■□□□□ 0.26
RAB1C-201ENST00000409159 NEO1Q92859 1461 aa16.7■□□□□ 0.26
RAB1C-201ENST00000409159 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
RAB1C-201ENST00000409159 NCOA1Q15788 1441 aa16.7■□□□□ 0.26
RAB1C-201ENST00000409159 RAB3GAP2Q9H2M9 1393 aa16.69■□□□□ 0.26
RAB1C-201ENST00000409159 HNRNPMP52272 730 aaKnown RBP eCLIP16.69■□□□□ 0.26
RAB1C-201ENST00000409159 ABCC1P33527 1531 aa16.69■□□□□ 0.26
RAB1C-201ENST00000409159 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
RAB1C-201ENST00000409159 C9orf84Q5VXU9 1444 aa16.68■□□□□ 0.26
RAB1C-201ENST00000409159 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
RAB1C-201ENST00000409159 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
RAB1C-201ENST00000409159 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
RAB1C-201ENST00000409159 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
RAB1C-201ENST00000409159 SYCP2Q9BX26 1530 aa16.65■□□□□ 0.26
RAB1C-201ENST00000409159 FAM69CQ0P6D2 419 aa16.65■□□□□ 0.26
RAB1C-201ENST00000409159 DIP2BQ9P265 1576 aa16.64■□□□□ 0.25
RAB1C-201ENST00000409159 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
RAB1C-201ENST00000409159 ARHGEF12Q9NZN5 1544 aa16.64■□□□□ 0.25
RAB1C-201ENST00000409159 MAP3K4Q9Y6R4 1608 aa16.63■□□□□ 0.25
RAB1C-201ENST00000409159 ADGRL1O94910 1474 aa16.63■□□□□ 0.25
RAB1C-201ENST00000409159 CCER1Q8TC90 406 aaPredicted RBP16.63■□□□□ 0.25
RAB1C-201ENST00000409159 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
RAB1C-201ENST00000409159 SCAPERQ9BY12 1400 aa16.62■□□□□ 0.25
RAB1C-201ENST00000409159 TEX14Q8IWB6 1497 aa16.62■□□□□ 0.25
RAB1C-201ENST00000409159 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
RAB1C-201ENST00000409159 TRAPPC8Q9Y2L5 1435 aa16.6■□□□□ 0.25
RAB1C-201ENST00000409159 ZNF518AQ6AHZ1 1483 aa16.6■□□□□ 0.25
RAB1C-201ENST00000409159 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
RAB1C-201ENST00000409159 SPAG9O60271 1321 aaKnown RBP16.59■□□□□ 0.25
RAB1C-201ENST00000409159 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
RAB1C-201ENST00000409159 ADGBQ8N7X0 1667 aa16.59■□□□□ 0.25
RAB1C-201ENST00000409159 KIF15Q9NS87 1388 aa16.58■□□□□ 0.24
RAB1C-201ENST00000409159 PLXNC1O60486 1568 aa16.57■□□□□ 0.24
RAB1C-201ENST00000409159 ANKRD50Q9ULJ7 1429 aa16.57■□□□□ 0.24
RAB1C-201ENST00000409159 POGZQ7Z3K3 1410 aa16.56■□□□□ 0.24
RAB1C-201ENST00000409159 DENND4BO75064 1496 aaPredicted RBP16.55■□□□□ 0.24
RAB1C-201ENST00000409159 AFAP1Q8N556 730 aa16.55■□□□□ 0.24
RAB1C-201ENST00000409159 MLH3Q9UHC1 1453 aa16.54■□□□□ 0.24
RAB1C-201ENST00000409159 DUOX2Q9NRD8 1548 aa16.53■□□□□ 0.24
RAB1C-201ENST00000409159 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
RAB1C-201ENST00000409159 KDM5CP41229 1560 aa16.52■□□□□ 0.24
RAB1C-201ENST00000409159 ZFYVE16Q7Z3T8 1539 aa16.51■□□□□ 0.23
RAB1C-201ENST00000409159 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
RAB1C-201ENST00000409159 ATP7AQ04656 1500 aa16.5■□□□□ 0.23
RAB1C-201ENST00000409159 MAGI2Q86UL8 1455 aa16.48■□□□□ 0.23
RAB1C-201ENST00000409159 DHX29Q7Z478 1369 aaKnown RBP16.48■□□□□ 0.23
RAB1C-201ENST00000409159 TRIM52Q96A61 297 aa16.46■□□□□ 0.23
RAB1C-201ENST00000409159 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
RAB1C-201ENST00000409159 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
RAB1C-201ENST00000409159 TIMELESSQ9UNS1 1208 aa16.45■□□□□ 0.22
RAB1C-201ENST00000409159 ZMYM4Q5VZL5 1548 aa16.44■□□□□ 0.22
RAB1C-201ENST00000409159 PPRC1Q5VV67 1664 aaKnown RBP16.43■□□□□ 0.22
RAB1C-201ENST00000409159 KIF13AQ9H1H9 1805 aa16.43■□□□□ 0.22
RAB1C-201ENST00000409159 KDM6BO15054 1643 aa16.43■□□□□ 0.22
RAB1C-201ENST00000409159 HECW2Q9P2P5 1572 aa16.43■□□□□ 0.22
RAB1C-201ENST00000409159 RAPGEF3O95398 923 aa16.42■□□□□ 0.22
RAB1C-201ENST00000409159 NUP155O75694 1391 aa16.41■□□□□ 0.22
RAB1C-201ENST00000409159 A2MP01023 1474 aa16.41■□□□□ 0.22
RAB1C-201ENST00000409159 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
RAB1C-201ENST00000409159 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
RAB1C-201ENST00000409159 PZPP20742 1482 aa16.39■□□□□ 0.21
RAB1C-201ENST00000409159 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
RAB1C-201ENST00000409159 UNC13BO14795 1591 aa16.38■□□□□ 0.21
RAB1C-201ENST00000409159 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
RAB1C-201ENST00000409159 EIF2AK4Q9P2K8 1649 aaKnown RBP16.38■□□□□ 0.21
RAB1C-201ENST00000409159 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
RAB1C-201ENST00000409159 KANK1Q14678 1352 aa16.35■□□□□ 0.21
RAB1C-201ENST00000409159 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms