RNA–Protein interactions for RNA: ENST00000409116.5

SNRNP27-202, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 5 BASIC

Gene SNRNP27, Length 1,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-202ENST00000409116 CDC42BPBQ9Y5S2 1711 aa23.51■■□□□ 1.35
SNRNP27-202ENST00000409116 ARAP3Q8WWN8 1544 aa23.51■■□□□ 1.35
SNRNP27-202ENST00000409116 PHLDB1Q86UU1 1377 aa23.48■■□□□ 1.35
SNRNP27-202ENST00000409116 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
SNRNP27-202ENST00000409116 NEO1Q92859 1461 aa23.47■■□□□ 1.35
SNRNP27-202ENST00000409116 EFCAB2Q5VUJ9 269 aa23.47■■□□□ 1.35
SNRNP27-202ENST00000409116 CFAP74Q9C0B2 1584 aa23.46■■□□□ 1.35
SNRNP27-202ENST00000409116 CFDP1Q9UEE9 299 aaPredicted RBP23.46■■□□□ 1.35
SNRNP27-202ENST00000409116 MYOM3Q5VTT5 1437 aa23.45■■□□□ 1.34
SNRNP27-202ENST00000409116 AKNAQ7Z591 1439 aa23.44■■□□□ 1.34
SNRNP27-202ENST00000409116 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
SNRNP27-202ENST00000409116 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
SNRNP27-202ENST00000409116 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
SNRNP27-202ENST00000409116 ADGRL1O94910 1474 aa23.4■■□□□ 1.34
SNRNP27-202ENST00000409116 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
SNRNP27-202ENST00000409116 KDM6BO15054 1643 aa23.38■■□□□ 1.33
SNRNP27-202ENST00000409116 ABCC1P33527 1531 aa23.37■■□□□ 1.33
SNRNP27-202ENST00000409116 FGD6Q6ZV73 1430 aa23.37■■□□□ 1.33
SNRNP27-202ENST00000409116 SCAPERQ9BY12 1400 aa23.37■■□□□ 1.33
SNRNP27-202ENST00000409116 MIA2Q96PC5 1412 aa23.36■■□□□ 1.33
SNRNP27-202ENST00000409116 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
SNRNP27-202ENST00000409116 ARHGEF12Q9NZN5 1544 aa23.35■■□□□ 1.33
SNRNP27-202ENST00000409116 SYCP2Q9BX26 1530 aa23.34■■□□□ 1.33
SNRNP27-202ENST00000409116 DENND4BO75064 1496 aaPredicted RBP23.33■■□□□ 1.33
SNRNP27-202ENST00000409116 RAPGEF3O95398 923 aa23.33■■□□□ 1.32
SNRNP27-202ENST00000409116 PLEKHH2Q8IVE3 1493 aa23.32■■□□□ 1.32
SNRNP27-202ENST00000409116 PTPN23Q9H3S7 1636 aa23.31■■□□□ 1.32
SNRNP27-202ENST00000409116 FRMPD1Q5SYB0 1578 aa23.31■■□□□ 1.32
SNRNP27-202ENST00000409116 HNRNPMP52272 730 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNRNP27-202ENST00000409116 POGZQ7Z3K3 1410 aa23.3■■□□□ 1.32
SNRNP27-202ENST00000409116 KIAA1107Q9UPP5 1409 aa23.3■■□□□ 1.32
SNRNP27-202ENST00000409116 TRAPPC8Q9Y2L5 1435 aa23.29■■□□□ 1.32
SNRNP27-202ENST00000409116 RICTORQ6R327 1708 aa23.28■■□□□ 1.32
SNRNP27-202ENST00000409116 TCOF1Q13428 1488 aaKnown RBP23.27■■□□□ 1.31
SNRNP27-202ENST00000409116 MBD5Q9P267 1494 aa23.27■■□□□ 1.31
SNRNP27-202ENST00000409116 AFAP1Q8N556 730 aa23.26■■□□□ 1.31
SNRNP27-202ENST00000409116 ZNF518AQ6AHZ1 1483 aa23.25■■□□□ 1.31
SNRNP27-202ENST00000409116 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
SNRNP27-202ENST00000409116 KDM5CP41229 1560 aa23.21■■□□□ 1.31
SNRNP27-202ENST00000409116 ARHGEF5Q12774 1597 aa23.21■■□□□ 1.31
SNRNP27-202ENST00000409116 RRBP1Q9P2E9 1410 aaKnown RBP23.2■■□□□ 1.31
SNRNP27-202ENST00000409116 ZMYM4Q5VZL5 1548 aa23.2■■□□□ 1.3
SNRNP27-202ENST00000409116 CCDC141Q6ZP82 1450 aa23.2■■□□□ 1.3
SNRNP27-202ENST00000409116 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
SNRNP27-202ENST00000409116 HECW2Q9P2P5 1572 aa23.15■■□□□ 1.3
SNRNP27-202ENST00000409116 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
SNRNP27-202ENST00000409116 ABCC5O15440 1437 aa23.14■■□□□ 1.3
SNRNP27-202ENST00000409116 DAPK1P53355 1430 aa23.14■■□□□ 1.3
SNRNP27-202ENST00000409116 YEATS2Q9ULM3 1422 aa23.13■■□□□ 1.29
SNRNP27-202ENST00000409116 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
SNRNP27-202ENST00000409116 MYT1LQ9UL68 1186 aa23.13■■□□□ 1.29
SNRNP27-202ENST00000409116 MLH3Q9UHC1 1453 aa23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 ZFYVE16Q7Z3T8 1539 aa23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 INO80Q9ULG1 1556 aaPredicted RBP23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 MAGI2Q86UL8 1455 aa23.12■■□□□ 1.29
SNRNP27-202ENST00000409116 ARHGEF40Q8TER5 1519 aa23.11■■□□□ 1.29
SNRNP27-202ENST00000409116 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
SNRNP27-202ENST00000409116 KIDINS220Q9ULH0 1771 aa23.11■■□□□ 1.29
SNRNP27-202ENST00000409116 ATP7AQ04656 1500 aa23.11■■□□□ 1.29
SNRNP27-202ENST00000409116 C9orf84Q5VXU9 1444 aa23.1■■□□□ 1.29
SNRNP27-202ENST00000409116 TSPY4P0CV99 314 aa23.09■■□□□ 1.29
SNRNP27-202ENST00000409116 TSPY10P0CW01 314 aa23.09■■□□□ 1.29
SNRNP27-202ENST00000409116 ITGAEP38570 1179 aa23.08■■□□□ 1.29
SNRNP27-202ENST00000409116 ABCA6Q8N139 1617 aa23.08■■□□□ 1.29
SNRNP27-202ENST00000409116 SHANK2Q9UPX8 1470 aa23.07■■□□□ 1.28
SNRNP27-202ENST00000409116 DIP2CQ9Y2E4 1556 aa23.07■■□□□ 1.28
SNRNP27-202ENST00000409116 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
SNRNP27-202ENST00000409116 RTEL1-TNFRSF6BF6WH68 1400 aa23.06■■□□□ 1.28
SNRNP27-202ENST00000409116 PTPRKQ15262 1439 aa23.06■■□□□ 1.28
SNRNP27-202ENST00000409116 CHIC2Q9UKJ5 165 aa23.06■■□□□ 1.28
SNRNP27-202ENST00000409116 ATP10AO60312 1499 aa23.02■■□□□ 1.27
SNRNP27-202ENST00000409116 PLXNC1O60486 1568 aa22.99■■□□□ 1.27
SNRNP27-202ENST00000409116 ADGBQ8N7X0 1667 aa22.98■■□□□ 1.27
SNRNP27-202ENST00000409116 ADGRL2O95490 1459 aa22.97■■□□□ 1.27
SNRNP27-202ENST00000409116 RRP7BPQ9NSQ0 103 aa22.97■■□□□ 1.27
SNRNP27-202ENST00000409116 SIGLEC1Q9BZZ2 1709 aa22.97■■□□□ 1.27
SNRNP27-202ENST00000409116 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
SNRNP27-202ENST00000409116 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
SNRNP27-202ENST00000409116 A2MP01023 1474 aa22.96■■□□□ 1.27
SNRNP27-202ENST00000409116 NCOA1Q15788 1441 aa22.95■■□□□ 1.27
SNRNP27-202ENST00000409116 REREQ9P2R6 1566 aa22.93■■□□□ 1.26
SNRNP27-202ENST00000409116 ARID4BQ4LE39 1312 aaPredicted RBP22.92■■□□□ 1.26
SNRNP27-202ENST00000409116 ROCK1Q13464 1354 aa22.91■■□□□ 1.26
SNRNP27-202ENST00000409116 DHX29Q7Z478 1369 aaKnown RBP22.9■■□□□ 1.26
SNRNP27-202ENST00000409116 DUOX2Q9NRD8 1548 aa22.9■■□□□ 1.26
SNRNP27-202ENST00000409116 AGLP35573 1532 aa22.86■■□□□ 1.25
SNRNP27-202ENST00000409116 MLECQ14165 292 aa22.83■■□□□ 1.25
SNRNP27-202ENST00000409116 KIF3BO15066 747 aa22.82■■□□□ 1.24
SNRNP27-202ENST00000409116 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
SNRNP27-202ENST00000409116 ANKRD50Q9ULJ7 1429 aa22.82■■□□□ 1.24
SNRNP27-202ENST00000409116 NAIPQ13075 1403 aa22.82■■□□□ 1.24
SNRNP27-202ENST00000409116 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
SNRNP27-202ENST00000409116 BCORL1Q5H9F3 1711 aa22.8■■□□□ 1.24
SNRNP27-202ENST00000409116 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
SNRNP27-202ENST00000409116 EIF2AK4Q9P2K8 1649 aaKnown RBP22.79■■□□□ 1.24
SNRNP27-202ENST00000409116 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
SNRNP27-202ENST00000409116 GGT6Q6P531 493 aa22.77■■□□□ 1.24
SNRNP27-202ENST00000409116 RNF17Q9BXT8 1623 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms