RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SCAPERQ9BY12 1400 aa20.65■□□□□ 0.9
SNORD88B-201ENST00000408454 ARHGAP5Q13017 1502 aa20.64■□□□□ 0.9
SNORD88B-201ENST00000408454 FRMPD1Q5SYB0 1578 aa20.63■□□□□ 0.89
SNORD88B-201ENST00000408454 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
SNORD88B-201ENST00000408454 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SNORD88B-201ENST00000408454 BCORL1Q5H9F3 1711 aa20.57■□□□□ 0.88
SNORD88B-201ENST00000408454 ADAMTSL3P82987 1691 aa20.57■□□□□ 0.88
SNORD88B-201ENST00000408454 PTPRMP28827 1452 aa20.56■□□□□ 0.88
SNORD88B-201ENST00000408454 C9orf84Q5VXU9 1444 aa20.55■□□□□ 0.88
SNORD88B-201ENST00000408454 ATP10AO60312 1499 aa20.54■□□□□ 0.88
SNORD88B-201ENST00000408454 PREX2Q70Z35 1606 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 MTUS2Q5JR59 1369 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 HECW2Q9P2P5 1572 aa20.53■□□□□ 0.88
SNORD88B-201ENST00000408454 PLEKHH2Q8IVE3 1493 aa20.52■□□□□ 0.88
SNORD88B-201ENST00000408454 KDM5CP41229 1560 aa20.49■□□□□ 0.87
SNORD88B-201ENST00000408454 ESF1Q9H501 851 aaKnown RBP20.48■□□□□ 0.87
SNORD88B-201ENST00000408454 MADDQ8WXG6 1647 aa20.47■□□□□ 0.87
SNORD88B-201ENST00000408454 MLH3Q9UHC1 1453 aa20.47■□□□□ 0.87
SNORD88B-201ENST00000408454 CCNB3Q8WWL7 1395 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 YEATS2Q9ULM3 1422 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 LRRIQ1Q96JM4 1722 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
SNORD88B-201ENST00000408454 ABCC1P33527 1531 aa20.45■□□□□ 0.86
SNORD88B-201ENST00000408454 EHBP1L1Q8N3D4 1523 aa20.43■□□□□ 0.86
SNORD88B-201ENST00000408454 CFDP1Q9UEE9 299 aaPredicted RBP20.43■□□□□ 0.86
SNORD88B-201ENST00000408454 CDC42BPBQ9Y5S2 1711 aa20.42■□□□□ 0.86
SNORD88B-201ENST00000408454 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
SNORD88B-201ENST00000408454 AFAP1Q8N556 730 aa20.41■□□□□ 0.86
SNORD88B-201ENST00000408454 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
SNORD88B-201ENST00000408454 ITSN2Q9NZM3 1697 aa20.39■□□□□ 0.86
SNORD88B-201ENST00000408454 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 FER1L4A9Z1Z3 1794 aa20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 CDC42BPAQ5VT25 1732 aa20.39■□□□□ 0.85
SNORD88B-201ENST00000408454 MLECQ14165 292 aa20.38■□□□□ 0.85
SNORD88B-201ENST00000408454 AGLP35573 1532 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 ARHGEF12Q9NZN5 1544 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 CNTLNQ9NXG0 1405 aa20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
SNORD88B-201ENST00000408454 DIP2CQ9Y2E4 1556 aa20.35■□□□□ 0.85
SNORD88B-201ENST00000408454 RSPH4AQ5TD94 716 aa20.35■□□□□ 0.85
SNORD88B-201ENST00000408454 TRAPPC8Q9Y2L5 1435 aa20.32■□□□□ 0.84
SNORD88B-201ENST00000408454 SYCP2Q9BX26 1530 aa20.31■□□□□ 0.84
SNORD88B-201ENST00000408454 APLP2Q06481 763 aa20.3■□□□□ 0.84
SNORD88B-201ENST00000408454 SUPT6HQ7KZ85 1726 aaKnown RBP20.3■□□□□ 0.84
SNORD88B-201ENST00000408454 SAMD9LQ8IVG5 1584 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 VPS8Q8N3P4 1428 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 LMTK3Q96Q04 1460 aa20.29■□□□□ 0.84
SNORD88B-201ENST00000408454 ABCA6Q8N139 1617 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
SNORD88B-201ENST00000408454 ATP7AQ04656 1500 aa20.27■□□□□ 0.83
SNORD88B-201ENST00000408454 UHRF1BP1Q6BDS2 1440 aa20.27■□□□□ 0.83
SNORD88B-201ENST00000408454 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 MAP3K1Q13233 1512 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 RTEL1-TNFRSF6BF6WH68 1400 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 PREX1Q8TCU6 1659 aa20.25■□□□□ 0.83
SNORD88B-201ENST00000408454 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 HNRNPMP52272 730 aaKnown RBP eCLIP20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
SNORD88B-201ENST00000408454 A2MP01023 1474 aa20.22■□□□□ 0.83
SNORD88B-201ENST00000408454 INO80Q9ULG1 1556 aaPredicted RBP20.21■□□□□ 0.83
SNORD88B-201ENST00000408454 NCOA2Q15596 1464 aa20.21■□□□□ 0.83
SNORD88B-201ENST00000408454 ADGBQ8N7X0 1667 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 TSPY4P0CV99 314 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 TSPY10P0CW01 314 aa20.2■□□□□ 0.82
SNORD88B-201ENST00000408454 SIGLEC1Q9BZZ2 1709 aa20.19■□□□□ 0.82
SNORD88B-201ENST00000408454 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
SNORD88B-201ENST00000408454 SETD1BQ9UPS6 1966 aaKnown RBP20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 MROH2AA6NES4 1674 aa20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 NPATQ14207 1427 aa20.18■□□□□ 0.82
SNORD88B-201ENST00000408454 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
SNORD88B-201ENST00000408454 LRRC9Q6ZRR7 1453 aa20.17■□□□□ 0.82
SNORD88B-201ENST00000408454 PLXNC1O60486 1568 aa20.14■□□□□ 0.81
SNORD88B-201ENST00000408454 CAMSAP2Q08AD1 1489 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 FBXO41Q8TF61 875 aa20.13■□□□□ 0.81
SNORD88B-201ENST00000408454 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 ILDR1Q86SU0 546 aaPredicted RBP20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 ARHGEF5Q12774 1597 aa20.12■□□□□ 0.81
SNORD88B-201ENST00000408454 DHX29Q7Z478 1369 aaKnown RBP20.11■□□□□ 0.81
SNORD88B-201ENST00000408454 C3P01024 1663 aa20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 HSPA2P54652 639 aa20.1■□□□□ 0.81
SNORD88B-201ENST00000408454 LOC105371045A0A1W2PR82 267 aa20.09■□□□□ 0.81
SNORD88B-201ENST00000408454 GGT6Q6P531 493 aa20.09■□□□□ 0.81
SNORD88B-201ENST00000408454 ZMYM3Q14202 1370 aa20.08■□□□□ 0.81
SNORD88B-201ENST00000408454 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
SNORD88B-201ENST00000408454 MYOM3Q5VTT5 1437 aa20.06■□□□□ 0.8
SNORD88B-201ENST00000408454 PTPRTO14522 1441 aa20.02■□□□□ 0.8
SNORD88B-201ENST00000408454 KIF3BO15066 747 aa20.02■□□□□ 0.8
SNORD88B-201ENST00000408454 KDM5DQ9BY66 1539 aa20.01■□□□□ 0.79
SNORD88B-201ENST00000408454 CLTCQ00610 1675 aaKnown RBP20■□□□□ 0.79
SNORD88B-201ENST00000408454 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
SNORD88B-201ENST00000408454 WASHC2CQ9Y4E1 1318 aa20■□□□□ 0.79
SNORD88B-201ENST00000408454 PKD2Q13563 968 aa19.99■□□□□ 0.79
SNORD88B-201ENST00000408454 EIF2AK4Q9P2K8 1649 aaKnown RBP19.96■□□□□ 0.79
SNORD88B-201ENST00000408454 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
SNORD88B-201ENST00000408454 PLA2R1Q13018 1463 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms