RNA–Protein interactions for RNA: ENST00000405234.1

TUBBP9-201, Transcript of tubulin beta class I pseudogene 9, humanhuman

BASIC

Gene TUBBP9, Length 1,099 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP9-201ENST00000405234 PROM2Q8N271 834 aa14.43□□□□□ -0.1
TUBBP9-201ENST00000405234 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
TUBBP9-201ENST00000405234 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
TUBBP9-201ENST00000405234 CD109Q6YHK3 1445 aa14.42□□□□□ -0.1
TUBBP9-201ENST00000405234 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
TUBBP9-201ENST00000405234 ATP10BO94823 1461 aa14.42□□□□□ -0.1
TUBBP9-201ENST00000405234 TEX14Q8IWB6 1497 aa14.42□□□□□ -0.1
TUBBP9-201ENST00000405234 SAMD9Q5K651 1589 aa14.38□□□□□ -0.11
TUBBP9-201ENST00000405234 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
TUBBP9-201ENST00000405234 MAGI3Q5TCQ9 1506 aa14.36□□□□□ -0.11
TUBBP9-201ENST00000405234 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
TUBBP9-201ENST00000405234 CFAP43Q8NDM7 1665 aa14.34□□□□□ -0.11
TUBBP9-201ENST00000405234 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.12
TUBBP9-201ENST00000405234 PLEKHD1A6NEE1 506 aa14.31□□□□□ -0.12
TUBBP9-201ENST00000405234 KIF21BO75037 1637 aa14.3□□□□□ -0.12
TUBBP9-201ENST00000405234 ADGRL1O94910 1474 aa14.3□□□□□ -0.12
TUBBP9-201ENST00000405234 NUP153P49790 1475 aaKnown RBP14.3□□□□□ -0.12
TUBBP9-201ENST00000405234 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
TUBBP9-201ENST00000405234 RAPGEF3O95398 923 aa14.27□□□□□ -0.13
TUBBP9-201ENST00000405234 ABCA9Q8IUA7 1624 aa14.26□□□□□ -0.13
TUBBP9-201ENST00000405234 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
TUBBP9-201ENST00000405234 AKT1S1Q96B36 256 aa14.24□□□□□ -0.13
TUBBP9-201ENST00000405234 EFCAB5A4FU69 1503 aa14.24□□□□□ -0.13
TUBBP9-201ENST00000405234 PHLDB1Q86UU1 1377 aa14.23□□□□□ -0.13
TUBBP9-201ENST00000405234 STAG3Q9UJ98 1225 aa14.2□□□□□ -0.14
TUBBP9-201ENST00000405234 NEO1Q92859 1461 aa14.19□□□□□ -0.14
TUBBP9-201ENST00000405234 ARHGAP35Q9NRY4 1499 aa14.19□□□□□ -0.14
TUBBP9-201ENST00000405234 VASPP50552 380 aaPredicted RBP14.18□□□□□ -0.14
TUBBP9-201ENST00000405234 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
TUBBP9-201ENST00000405234 FMN1Q68DA7 1419 aa14.16□□□□□ -0.14
TUBBP9-201ENST00000405234 AKNAQ7Z591 1439 aa14.16□□□□□ -0.14
TUBBP9-201ENST00000405234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
TUBBP9-201ENST00000405234 ARID4BQ4LE39 1312 aaPredicted RBP14.15□□□□□ -0.15
TUBBP9-201ENST00000405234 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
TUBBP9-201ENST00000405234 FANCAO15360 1455 aa14.13□□□□□ -0.15
TUBBP9-201ENST00000405234 DENND4BO75064 1496 aaPredicted RBP14.12□□□□□ -0.15
TUBBP9-201ENST00000405234 TTC37Q6PGP7 1564 aa14.11□□□□□ -0.15
TUBBP9-201ENST00000405234 SPDYE1Q8NFV5 336 aaPredicted RBP14.11□□□□□ -0.15
TUBBP9-201ENST00000405234 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
TUBBP9-201ENST00000405234 PLCH2O75038 1416 aa14.1□□□□□ -0.15
TUBBP9-201ENST00000405234 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
TUBBP9-201ENST00000405234 HECW1Q76N89 1606 aa14.08□□□□□ -0.15
TUBBP9-201ENST00000405234 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
TUBBP9-201ENST00000405234 SCAPERQ9BY12 1400 aa14.07□□□□□ -0.16
TUBBP9-201ENST00000405234 HECW2Q9P2P5 1572 aa14.07□□□□□ -0.16
TUBBP9-201ENST00000405234 AMER1Q5JTC6 1135 aaPredicted RBP14.06□□□□□ -0.16
TUBBP9-201ENST00000405234 CLEC11AQ9Y240 323 aa14.06□□□□□ -0.16
TUBBP9-201ENST00000405234 RICTORQ6R327 1708 aa14.06□□□□□ -0.16
TUBBP9-201ENST00000405234 TROQ12816 1431 aaPredicted RBP14.05□□□□□ -0.16
TUBBP9-201ENST00000405234 PTPRMP28827 1452 aa14.05□□□□□ -0.16
TUBBP9-201ENST00000405234 CFAP74Q9C0B2 1584 aa14.05□□□□□ -0.16
TUBBP9-201ENST00000405234 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
TUBBP9-201ENST00000405234 MLECQ14165 292 aa14.04□□□□□ -0.16
TUBBP9-201ENST00000405234 PLCD3Q8N3E9 789 aa14.04□□□□□ -0.16
TUBBP9-201ENST00000405234 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
TUBBP9-201ENST00000405234 KIF14Q15058 1648 aa14.04□□□□□ -0.16
TUBBP9-201ENST00000405234 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
TUBBP9-201ENST00000405234 BCORL1Q5H9F3 1711 aa14.02□□□□□ -0.16
TUBBP9-201ENST00000405234 CASKIN1Q8WXD9 1431 aa14.02□□□□□ -0.16
TUBBP9-201ENST00000405234 AFAP1Q8N556 730 aa14.02□□□□□ -0.17
TUBBP9-201ENST00000405234 CLIP1P30622 1438 aa14.01□□□□□ -0.17
TUBBP9-201ENST00000405234 MYT1LQ9UL68 1186 aa14.01□□□□□ -0.17
TUBBP9-201ENST00000405234 PLEKHG5O94827 1062 aa14□□□□□ -0.17
TUBBP9-201ENST00000405234 ILDR1Q86SU0 546 aaPredicted RBP14□□□□□ -0.17
TUBBP9-201ENST00000405234 ZFYVE16Q7Z3T8 1539 aa14□□□□□ -0.17
TUBBP9-201ENST00000405234 ARHGEF40Q8TER5 1519 aa14□□□□□ -0.17
TUBBP9-201ENST00000405234 MAGI2Q86UL8 1455 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 POGZQ7Z3K3 1410 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 MYO5CQ9NQX4 1742 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 MIER1Q8N108 512 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 MADDQ8WXG6 1647 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 ARHGAP5Q13017 1502 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 ZMYM4Q5VZL5 1548 aa13.99□□□□□ -0.17
TUBBP9-201ENST00000405234 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
TUBBP9-201ENST00000405234 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
TUBBP9-201ENST00000405234 SIGLEC1Q9BZZ2 1709 aa13.96□□□□□ -0.17
TUBBP9-201ENST00000405234 ATP10AO60312 1499 aa13.96□□□□□ -0.17
TUBBP9-201ENST00000405234 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
TUBBP9-201ENST00000405234 PRR29P0C7W0 189 aa13.95□□□□□ -0.18
TUBBP9-201ENST00000405234 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
TUBBP9-201ENST00000405234 ZNF777Q9ULD5 760 aaPredicted RBP13.95□□□□□ -0.18
TUBBP9-201ENST00000405234 RIMS1Q86UR5 1692 aaKnown RBP13.95□□□□□ -0.18
TUBBP9-201ENST00000405234 IFNLR1Q8IU57 520 aaPredicted RBP13.94□□□□□ -0.18
TUBBP9-201ENST00000405234 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
TUBBP9-201ENST00000405234 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
TUBBP9-201ENST00000405234 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
TUBBP9-201ENST00000405234 CEBPAP49715 358 aaPredicted RBP13.92□□□□□ -0.18
TUBBP9-201ENST00000405234 FYCO1Q9BQS8 1478 aa13.92□□□□□ -0.18
TUBBP9-201ENST00000405234 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
TUBBP9-201ENST00000405234 TRAPPC8Q9Y2L5 1435 aa13.91□□□□□ -0.18
TUBBP9-201ENST00000405234 ARHGEF12Q9NZN5 1544 aa13.91□□□□□ -0.18
TUBBP9-201ENST00000405234 HSPA2P54652 639 aa13.91□□□□□ -0.18
TUBBP9-201ENST00000405234 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
TUBBP9-201ENST00000405234 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
TUBBP9-201ENST00000405234 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
TUBBP9-201ENST00000405234 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
TUBBP9-201ENST00000405234 PREX2Q70Z35 1606 aa13.88□□□□□ -0.19
TUBBP9-201ENST00000405234 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
TUBBP9-201ENST00000405234 KDM5CP41229 1560 aa13.88□□□□□ -0.19
TUBBP9-201ENST00000405234 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms