RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 KIAA0586Q9BVV6 1533 aa21.35■■□□□ 1.01
ATG4B-205ENST00000404914 PRKRIP1Q9H875 184 aaPredicted RBP21.35■■□□□ 1.01
ATG4B-205ENST00000404914 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
ATG4B-205ENST00000404914 ERICH6BQ5W0A0 696 aa21.34■■□□□ 1.01
ATG4B-205ENST00000404914 EIF4G2P78344 907 aaKnown RBP eCLIP21.33■■□□□ 1.01
ATG4B-205ENST00000404914 MRS2Q9HD23 443 aa21.33■■□□□ 1.01
ATG4B-205ENST00000404914 KDM6BO15054 1643 aa21.33■■□□□ 1
ATG4B-205ENST00000404914 FMN1Q68DA7 1419 aa21.32■■□□□ 1
ATG4B-205ENST00000404914 FOXD1Q16676 465 aa21.32■■□□□ 1
ATG4B-205ENST00000404914 MYOM3Q5VTT5 1437 aa21.32■■□□□ 1
ATG4B-205ENST00000404914 NBR1Q14596 966 aa21.3■■□□□ 1
ATG4B-205ENST00000404914 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
ATG4B-205ENST00000404914 CCDC7Q96M83 1385 aa21.29■■□□□ 1
ATG4B-205ENST00000404914 ZBED9Q6R2W3 1325 aa21.28■■□□□ 1
ATG4B-205ENST00000404914 SENP3-EIF4A1A0A087X0R7 540 aa21.27■■□□□ 1
ATG4B-205ENST00000404914 CLASP1Q7Z460 1538 aa21.26■□□□□ 0.99
ATG4B-205ENST00000404914 NCOA1Q15788 1441 aa21.26■□□□□ 0.99
ATG4B-205ENST00000404914 JPH4Q96JJ6 628 aa21.26■□□□□ 0.99
ATG4B-205ENST00000404914 NOP58Q9Y2X3 529 aaKnown RBP21.25■□□□□ 0.99
ATG4B-205ENST00000404914 AKNAQ7Z591 1439 aa21.25■□□□□ 0.99
ATG4B-205ENST00000404914 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
ATG4B-205ENST00000404914 MAGI3Q5TCQ9 1506 aa21.24■□□□□ 0.99
ATG4B-205ENST00000404914 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
ATG4B-205ENST00000404914 OSCARQ8IYS5 282 aa21.23■□□□□ 0.99
ATG4B-205ENST00000404914 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
ATG4B-205ENST00000404914 SAMD9Q5K651 1589 aa21.23■□□□□ 0.99
ATG4B-205ENST00000404914 DISP1Q96F81 1524 aa21.22■□□□□ 0.99
ATG4B-205ENST00000404914 HECW1Q76N89 1606 aa21.22■□□□□ 0.99
ATG4B-205ENST00000404914 SUPT6HQ7KZ85 1726 aaKnown RBP21.22■□□□□ 0.99
ATG4B-205ENST00000404914 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
ATG4B-205ENST00000404914 MPHOSPH9Q99550 1183 aa21.2■□□□□ 0.98
ATG4B-205ENST00000404914 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
ATG4B-205ENST00000404914 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
ATG4B-205ENST00000404914 GCC2Q8IWJ2 1684 aa21.18■□□□□ 0.98
ATG4B-205ENST00000404914 KIAA0556O60303 1618 aa21.17■□□□□ 0.98
ATG4B-205ENST00000404914 PRG4Q92954 1404 aaPredicted RBP21.17■□□□□ 0.98
ATG4B-205ENST00000404914 MYT1LQ9UL68 1186 aa21.15■□□□□ 0.98
ATG4B-205ENST00000404914 EHBP1L1Q8N3D4 1523 aa21.15■□□□□ 0.98
ATG4B-205ENST00000404914 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
ATG4B-205ENST00000404914 SPATA31E1Q6ZUB1 1445 aa21.1■□□□□ 0.97
ATG4B-205ENST00000404914 ARID3CA6NKF2 412 aa21.1■□□□□ 0.97
ATG4B-205ENST00000404914 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
ATG4B-205ENST00000404914 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
ATG4B-205ENST00000404914 TEX14Q8IWB6 1497 aa21.08■□□□□ 0.97
ATG4B-205ENST00000404914 CCDC136Q96JN2 1154 aa21.08■□□□□ 0.96
ATG4B-205ENST00000404914 ANKRD30BQ9BXX2 1392 aa21.06■□□□□ 0.96
ATG4B-205ENST00000404914 CARMIL2Q6F5E8 1435 aa21.06■□□□□ 0.96
ATG4B-205ENST00000404914 NUDCQ9Y266 331 aa21.06■□□□□ 0.96
ATG4B-205ENST00000404914 DHX29Q7Z478 1369 aaKnown RBP21.05■□□□□ 0.96
ATG4B-205ENST00000404914 RNF123Q5XPI4 1314 aa21.05■□□□□ 0.96
ATG4B-205ENST00000404914 RPRD2Q5VT52 1461 aaKnown RBP21.05■□□□□ 0.96
ATG4B-205ENST00000404914 IPO9Q96P70 1041 aaKnown RBP21.04■□□□□ 0.96
ATG4B-205ENST00000404914 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
ATG4B-205ENST00000404914 POLR1AO95602 1720 aaPredicted RBP21.04■□□□□ 0.96
ATG4B-205ENST00000404914 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
ATG4B-205ENST00000404914 BCORL1Q5H9F3 1711 aa21■□□□□ 0.95
ATG4B-205ENST00000404914 ANP32AP39687 249 aaKnown RBP21■□□□□ 0.95
ATG4B-205ENST00000404914 PLB1Q6P1J6 1458 aa20.99■□□□□ 0.95
ATG4B-205ENST00000404914 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
ATG4B-205ENST00000404914 PTPRGP23470 1445 aa20.95■□□□□ 0.95
ATG4B-205ENST00000404914 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
ATG4B-205ENST00000404914 ANO8Q9HCE9 1232 aaPredicted RBP20.95■□□□□ 0.94
ATG4B-205ENST00000404914 ZNF644Q9H582 1327 aaPredicted RBP20.95■□□□□ 0.94
ATG4B-205ENST00000404914 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
ATG4B-205ENST00000404914 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
ATG4B-205ENST00000404914 PRKCSHP14314 528 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-205ENST00000404914 NPM2Q86SE8 214 aaKnown RBP20.92■□□□□ 0.94
ATG4B-205ENST00000404914 IL27Q8NEV9 243 aa20.92■□□□□ 0.94
ATG4B-205ENST00000404914 PNISRQ8TF01 805 aaKnown RBP20.92■□□□□ 0.94
ATG4B-205ENST00000404914 RAPGEF6Q8TEU7 1601 aa20.91■□□□□ 0.94
ATG4B-205ENST00000404914 RTL5Q5HYW3 569 aaPredicted RBP20.9■□□□□ 0.94
ATG4B-205ENST00000404914 DAPK1P53355 1430 aa20.9■□□□□ 0.94
ATG4B-205ENST00000404914 MIA2Q96PC5 1412 aa20.9■□□□□ 0.94
ATG4B-205ENST00000404914 RIMBP3CA6NJZ7 1639 aa20.89■□□□□ 0.93
ATG4B-205ENST00000404914 RIMBP3BA6NNM3 1639 aa20.89■□□□□ 0.93
ATG4B-205ENST00000404914 RIMBP3Q9UFD9 1639 aa20.89■□□□□ 0.93
ATG4B-205ENST00000404914 USP47Q96K76 1375 aa20.89■□□□□ 0.93
ATG4B-205ENST00000404914 ABCC5O15440 1437 aa20.88■□□□□ 0.93
ATG4B-205ENST00000404914 ABCA8O94911 1581 aa20.88■□□□□ 0.93
ATG4B-205ENST00000404914 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
ATG4B-205ENST00000404914 EXOC6Q8TAG9 804 aa20.87■□□□□ 0.93
ATG4B-205ENST00000404914 LAS1LQ9Y4W2 734 aaKnown RBP20.87■□□□□ 0.93
ATG4B-205ENST00000404914 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
ATG4B-205ENST00000404914 RTN4Q9NQC3 1192 aaKnown RBP20.85■□□□□ 0.93
ATG4B-205ENST00000404914 PZPP20742 1482 aa20.84■□□□□ 0.93
ATG4B-205ENST00000404914 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
ATG4B-205ENST00000404914 TMC1Q8TDI8 760 aa20.84■□□□□ 0.93
ATG4B-205ENST00000404914 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
ATG4B-205ENST00000404914 SKAP1Q86WV1 359 aa20.82■□□□□ 0.92
ATG4B-205ENST00000404914 DNMT1P26358 1616 aaKnown RBP20.82■□□□□ 0.92
ATG4B-205ENST00000404914 KDM5CP41229 1560 aa20.81■□□□□ 0.92
ATG4B-205ENST00000404914 RRP1P56182 461 aaKnown RBP20.8■□□□□ 0.92
ATG4B-205ENST00000404914 CYB5RLQ6IPT4 315 aa20.79■□□□□ 0.92
ATG4B-205ENST00000404914 ADCY10Q96PN6 1610 aa20.79■□□□□ 0.92
ATG4B-205ENST00000404914 PDE4AP27815 886 aa20.78■□□□□ 0.92
ATG4B-205ENST00000404914 ABCC2Q92887 1545 aa20.77■□□□□ 0.92
ATG4B-205ENST00000404914 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.92
ATG4B-205ENST00000404914 ATP10BO94823 1461 aa20.76■□□□□ 0.91
ATG4B-205ENST00000404914 NEFMP07197 916 aa20.75■□□□□ 0.91
ATG4B-205ENST00000404914 KIF14Q15058 1648 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms