RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ITSN2Q9NZM3 1697 aa23.58■■□□□ 1.37
CHRFAM7A-203ENST00000401522 MAP3K4Q9Y6R4 1608 aa23.58■■□□□ 1.36
CHRFAM7A-203ENST00000401522 MIA2Q96PC5 1412 aa23.57■■□□□ 1.36
CHRFAM7A-203ENST00000401522 PREX2Q70Z35 1606 aa23.57■■□□□ 1.36
CHRFAM7A-203ENST00000401522 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
CHRFAM7A-203ENST00000401522 ZNF316A6NFI3 1004 aaPredicted RBP23.56■■□□□ 1.36
CHRFAM7A-203ENST00000401522 CFDP1Q9UEE9 299 aaPredicted RBP23.56■■□□□ 1.36
CHRFAM7A-203ENST00000401522 CDC42BPBQ9Y5S2 1711 aa23.55■■□□□ 1.36
CHRFAM7A-203ENST00000401522 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
CHRFAM7A-203ENST00000401522 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
CHRFAM7A-203ENST00000401522 ARHGAP5Q13017 1502 aa23.51■■□□□ 1.35
CHRFAM7A-203ENST00000401522 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
CHRFAM7A-203ENST00000401522 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
CHRFAM7A-203ENST00000401522 FANCAO15360 1455 aa23.47■■□□□ 1.35
CHRFAM7A-203ENST00000401522 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
CHRFAM7A-203ENST00000401522 PTPN23Q9H3S7 1636 aa23.47■■□□□ 1.35
CHRFAM7A-203ENST00000401522 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
CHRFAM7A-203ENST00000401522 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
CHRFAM7A-203ENST00000401522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHRFAM7A-203ENST00000401522 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.35
CHRFAM7A-203ENST00000401522 PPRC1Q5VV67 1664 aaKnown RBP23.44■■□□□ 1.34
CHRFAM7A-203ENST00000401522 SAMD9LQ8IVG5 1584 aa23.43■■□□□ 1.34
CHRFAM7A-203ENST00000401522 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
CHRFAM7A-203ENST00000401522 CLSPNQ9HAW4 1339 aa23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 NEO1Q92859 1461 aa23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 TSPOAP1O95153 1857 aa23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
CHRFAM7A-203ENST00000401522 FAM50AQ14320 339 aaKnown RBP23.41■■□□□ 1.34
CHRFAM7A-203ENST00000401522 AKNAQ7Z591 1439 aa23.4■■□□□ 1.34
CHRFAM7A-203ENST00000401522 PLEKHH2Q8IVE3 1493 aa23.4■■□□□ 1.34
CHRFAM7A-203ENST00000401522 KIAA1107Q9UPP5 1409 aa23.4■■□□□ 1.34
CHRFAM7A-203ENST00000401522 ABCC1P33527 1531 aa23.36■■□□□ 1.33
CHRFAM7A-203ENST00000401522 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
CHRFAM7A-203ENST00000401522 ADGRL1O94910 1474 aa23.35■■□□□ 1.33
CHRFAM7A-203ENST00000401522 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
CHRFAM7A-203ENST00000401522 HNRNPMP52272 730 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHRFAM7A-203ENST00000401522 ARHGEF12Q9NZN5 1544 aa23.34■■□□□ 1.33
CHRFAM7A-203ENST00000401522 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
CHRFAM7A-203ENST00000401522 SYCP2Q9BX26 1530 aa23.33■■□□□ 1.33
CHRFAM7A-203ENST00000401522 SCAPERQ9BY12 1400 aa23.33■■□□□ 1.32
CHRFAM7A-203ENST00000401522 ARHGEF5Q12774 1597 aa23.32■■□□□ 1.32
CHRFAM7A-203ENST00000401522 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
CHRFAM7A-203ENST00000401522 DHX57Q6P158 1386 aaKnown RBP23.3■■□□□ 1.32
CHRFAM7A-203ENST00000401522 ABCC5O15440 1437 aa23.29■■□□□ 1.32
CHRFAM7A-203ENST00000401522 PELP1Q8IZL8 1130 aaKnown RBP23.29■■□□□ 1.32
CHRFAM7A-203ENST00000401522 DAPK1P53355 1430 aa23.28■■□□□ 1.32
CHRFAM7A-203ENST00000401522 TRAPPC8Q9Y2L5 1435 aa23.27■■□□□ 1.32
CHRFAM7A-203ENST00000401522 CCDC141Q6ZP82 1450 aa23.27■■□□□ 1.32
CHRFAM7A-203ENST00000401522 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
CHRFAM7A-203ENST00000401522 ITGAEP38570 1179 aa23.25■■□□□ 1.31
CHRFAM7A-203ENST00000401522 AFAP1Q8N556 730 aa23.25■■□□□ 1.31
CHRFAM7A-203ENST00000401522 PTPRKQ15262 1439 aa23.24■■□□□ 1.31
CHRFAM7A-203ENST00000401522 POGZQ7Z3K3 1410 aa23.24■■□□□ 1.31
CHRFAM7A-203ENST00000401522 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
CHRFAM7A-203ENST00000401522 TSPY4P0CV99 314 aa23.23■■□□□ 1.31
CHRFAM7A-203ENST00000401522 TSPY10P0CW01 314 aa23.23■■□□□ 1.31
CHRFAM7A-203ENST00000401522 RAPGEF3O95398 923 aa23.21■■□□□ 1.31
CHRFAM7A-203ENST00000401522 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
CHRFAM7A-203ENST00000401522 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
CHRFAM7A-203ENST00000401522 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
CHRFAM7A-203ENST00000401522 RICTORQ6R327 1708 aa23.2■■□□□ 1.3
CHRFAM7A-203ENST00000401522 KDM5CP41229 1560 aa23.19■■□□□ 1.3
CHRFAM7A-203ENST00000401522 C9orf84Q5VXU9 1444 aa23.18■■□□□ 1.3
CHRFAM7A-203ENST00000401522 MAST1Q9Y2H9 1570 aa23.17■■□□□ 1.3
CHRFAM7A-203ENST00000401522 SPAG9O60271 1321 aaKnown RBP23.17■■□□□ 1.3
CHRFAM7A-203ENST00000401522 RTEL1-TNFRSF6BF6WH68 1400 aa23.17■■□□□ 1.3
CHRFAM7A-203ENST00000401522 FRMPD1Q5SYB0 1578 aa23.16■■□□□ 1.3
CHRFAM7A-203ENST00000401522 CHIC2Q9UKJ5 165 aa23.16■■□□□ 1.3
CHRFAM7A-203ENST00000401522 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
CHRFAM7A-203ENST00000401522 ADGRL2O95490 1459 aa23.14■■□□□ 1.3
CHRFAM7A-203ENST00000401522 MLH3Q9UHC1 1453 aa23.14■■□□□ 1.3
CHRFAM7A-203ENST00000401522 NCOA1Q15788 1441 aa23.13■■□□□ 1.29
CHRFAM7A-203ENST00000401522 MIER1Q8N108 512 aa23.12■■□□□ 1.29
CHRFAM7A-203ENST00000401522 GTF3C3Q9Y5Q9 886 aa23.12■■□□□ 1.29
CHRFAM7A-203ENST00000401522 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
CHRFAM7A-203ENST00000401522 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
CHRFAM7A-203ENST00000401522 KDM6BO15054 1643 aa23.12■■□□□ 1.29
CHRFAM7A-203ENST00000401522 INO80Q9ULG1 1556 aaPredicted RBP23.11■■□□□ 1.29
CHRFAM7A-203ENST00000401522 ZFYVE16Q7Z3T8 1539 aa23.11■■□□□ 1.29
CHRFAM7A-203ENST00000401522 ADGBQ8N7X0 1667 aa23.11■■□□□ 1.29
CHRFAM7A-203ENST00000401522 ATP7AQ04656 1500 aa23.1■■□□□ 1.29
CHRFAM7A-203ENST00000401522 HECW2Q9P2P5 1572 aa23.1■■□□□ 1.29
CHRFAM7A-203ENST00000401522 MAGI2Q86UL8 1455 aa23.09■■□□□ 1.29
CHRFAM7A-203ENST00000401522 KIDINS220Q9ULH0 1771 aa23.09■■□□□ 1.29
CHRFAM7A-203ENST00000401522 PLXNC1O60486 1568 aa23.08■■□□□ 1.28
CHRFAM7A-203ENST00000401522 RRP7BPQ9NSQ0 103 aa23.07■■□□□ 1.28
CHRFAM7A-203ENST00000401522 MYT1LQ9UL68 1186 aa23.07■■□□□ 1.28
CHRFAM7A-203ENST00000401522 HFM1A2PYH4 1435 aa23.06■■□□□ 1.28
CHRFAM7A-203ENST00000401522 NAIPQ13075 1403 aa23.04■■□□□ 1.28
CHRFAM7A-203ENST00000401522 KIF15Q9NS87 1388 aa23.04■■□□□ 1.28
CHRFAM7A-203ENST00000401522 YEATS2Q9ULM3 1422 aa23.01■■□□□ 1.27
CHRFAM7A-203ENST00000401522 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
CHRFAM7A-203ENST00000401522 ABCA6Q8N139 1617 aa23■■□□□ 1.27
CHRFAM7A-203ENST00000401522 RAB3GAP2Q9H2M9 1393 aa22.99■■□□□ 1.27
CHRFAM7A-203ENST00000401522 DUOX2Q9NRD8 1548 aa22.99■■□□□ 1.27
CHRFAM7A-203ENST00000401522 GCC2Q8IWJ2 1684 aa22.99■■□□□ 1.27
CHRFAM7A-203ENST00000401522 DIP2CQ9Y2E4 1556 aa22.99■■□□□ 1.27
CHRFAM7A-203ENST00000401522 DHX29Q7Z478 1369 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms