RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
KDM5A-201ENST00000399788 AMER1Q5JTC6 1135 aaPredicted RBP10.52□□□□□ -0.72
KDM5A-201ENST00000399788 MORC1Q86VD1 984 aa10.51□□□□□ -0.73
KDM5A-201ENST00000399788 TMF1P82094 1093 aa10.51□□□□□ -0.73
KDM5A-201ENST00000399788 CNKSR2Q8WXI2 1034 aa10.51□□□□□ -0.73
KDM5A-201ENST00000399788 CHMP4AQ9BY43 222 aa10.5□□□□□ -0.73
KDM5A-201ENST00000399788 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
KDM5A-201ENST00000399788 APBB1O00213 710 aa10.5□□□□□ -0.73
KDM5A-201ENST00000399788 CEP89Q96ST8 783 aa10.5□□□□□ -0.73
KDM5A-201ENST00000399788 EID1Q9Y6B2 187 aa10.5□□□□□ -0.73
KDM5A-201ENST00000399788 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
KDM5A-201ENST00000399788 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
KDM5A-201ENST00000399788 MEX3CQ5U5Q3 659 aaKnown RBP10.49□□□□□ -0.73
KDM5A-201ENST00000399788 MARCH6O60337 910 aa10.49□□□□□ -0.73
KDM5A-201ENST00000399788 ERICH6BQ5W0A0 696 aa10.49□□□□□ -0.73
KDM5A-201ENST00000399788 HSCBQ8IWL3 235 aa10.49□□□□□ -0.73
KDM5A-201ENST00000399788 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
KDM5A-201ENST00000399788 CLIP1P30622 1438 aa10.47□□□□□ -0.73
KDM5A-201ENST00000399788 A0A0U1RQG5 324 aaPredicted RBP10.47□□□□□ -0.73
KDM5A-201ENST00000399788 DCAF11Q8TEB1 546 aa10.47□□□□□ -0.73
KDM5A-201ENST00000399788 NAP1L5Q96NT1 182 aaPredicted RBP10.46□□□□□ -0.73
KDM5A-201ENST00000399788 EVA1CP58658 441 aa10.46□□□□□ -0.73
KDM5A-201ENST00000399788 GPATCH3Q96I76 525 aa10.46□□□□□ -0.73
KDM5A-201ENST00000399788 CTDP1Q9Y5B0 961 aaPredicted RBP10.46□□□□□ -0.73
KDM5A-201ENST00000399788 SPAG9O60271 1321 aaKnown RBP10.46□□□□□ -0.74
KDM5A-201ENST00000399788 KLHL34Q8N239 644 aa10.46□□□□□ -0.74
KDM5A-201ENST00000399788 CWC22Q9HCG8 908 aaKnown RBP10.46□□□□□ -0.74
KDM5A-201ENST00000399788 CALD1Q05682 793 aaKnown RBP10.46□□□□□ -0.74
KDM5A-201ENST00000399788 HTATSF1O43719 755 aaKnown RBP10.45□□□□□ -0.74
KDM5A-201ENST00000399788 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
KDM5A-201ENST00000399788 ANO8Q9HCE9 1232 aaPredicted RBP10.45□□□□□ -0.74
KDM5A-201ENST00000399788 TCEAL9Q9UHQ7 104 aa10.45□□□□□ -0.74
KDM5A-201ENST00000399788 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
KDM5A-201ENST00000399788 IPO8O15397 1037 aaKnown RBP10.44□□□□□ -0.74
KDM5A-201ENST00000399788 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
KDM5A-201ENST00000399788 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
KDM5A-201ENST00000399788 WWC1Q8IX03 1113 aa10.44□□□□□ -0.74
KDM5A-201ENST00000399788 CCNB3Q8WWL7 1395 aa10.44□□□□□ -0.74
KDM5A-201ENST00000399788 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
KDM5A-201ENST00000399788 CREBRFQ8IUR6 639 aa10.43□□□□□ -0.74
KDM5A-201ENST00000399788 HSP90B1P14625 803 aaKnown RBP10.43□□□□□ -0.74
KDM5A-201ENST00000399788 TPM4P67936 248 aa10.42□□□□□ -0.74
KDM5A-201ENST00000399788 SUPT16HQ9Y5B9 1047 aaKnown RBP10.42□□□□□ -0.74
KDM5A-201ENST00000399788 MSNP26038 577 aaKnown RBP10.41□□□□□ -0.74
KDM5A-201ENST00000399788 AMPHP49418 695 aa10.41□□□□□ -0.74
KDM5A-201ENST00000399788 LTV1Q96GA3 475 aaPredicted RBP10.4□□□□□ -0.74
KDM5A-201ENST00000399788 RAD21O60216 631 aa10.4□□□□□ -0.75
KDM5A-201ENST00000399788 SPRYD3Q8NCJ5 442 aa10.39□□□□□ -0.75
KDM5A-201ENST00000399788 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
KDM5A-201ENST00000399788 U2AF1L5P0DN76 240 aaPredicted RBP10.39□□□□□ -0.75
KDM5A-201ENST00000399788 U2AF1Q01081 240 aaKnown RBP eCLIP10.39□□□□□ -0.755e-6■■□□□ 12.9
KDM5A-201ENST00000399788 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
KDM5A-201ENST00000399788 MIER1Q8N108 512 aa10.39□□□□□ -0.75
KDM5A-201ENST00000399788 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
KDM5A-201ENST00000399788 FBXO3Q9UK99 471 aa10.38□□□□□ -0.75
KDM5A-201ENST00000399788 AMOTL1Q8IY63 956 aa10.37□□□□□ -0.75
KDM5A-201ENST00000399788 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
KDM5A-201ENST00000399788 SLC4A10Q6U841 1118 aa10.36□□□□□ -0.75
KDM5A-201ENST00000399788 KIF27Q86VH2 1401 aa10.36□□□□□ -0.75
KDM5A-201ENST00000399788 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
KDM5A-201ENST00000399788 B4GALNT3Q6L9W6 998 aa10.35□□□□□ -0.75
KDM5A-201ENST00000399788 PES1O00541 588 aaKnown RBP10.35□□□□□ -0.75
KDM5A-201ENST00000399788 ITPRIPQ8IWB1 547 aa10.35□□□□□ -0.75
KDM5A-201ENST00000399788 AKAP17AQ02040 695 aaKnown RBP10.34□□□□□ -0.75
KDM5A-201ENST00000399788 HMMRO75330 724 aa10.34□□□□□ -0.75
KDM5A-201ENST00000399788 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
KDM5A-201ENST00000399788 SYTL4Q96C24 671 aaPredicted RBP10.34□□□□□ -0.75
KDM5A-201ENST00000399788 RB1CC1Q8TDY2 1594 aa10.33□□□□□ -0.76
KDM5A-201ENST00000399788 GOLGA6L1Q8N7Z2 621 aa10.33□□□□□ -0.76
KDM5A-201ENST00000399788 TPM3P06753 285 aa10.33□□□□□ -0.76
KDM5A-201ENST00000399788 BAZ1BQ9UIG0 1483 aaKnown RBP10.33□□□□□ -0.76
KDM5A-201ENST00000399788 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
KDM5A-201ENST00000399788 TPD52L1Q16890 204 aaPredicted RBP10.33□□□□□ -0.76
KDM5A-201ENST00000399788 SF3A1Q15459 793 aaKnown RBP10.32□□□□□ -0.76
KDM5A-201ENST00000399788 SYAP1Q96A49 352 aaPredicted RBP10.32□□□□□ -0.76
KDM5A-201ENST00000399788 EFCAB2Q5VUJ9 269 aa10.32□□□□□ -0.76
KDM5A-201ENST00000399788 PPP4R2Q9NY27 417 aa10.32□□□□□ -0.76
KDM5A-201ENST00000399788 KIF3AQ9Y496 699 aa10.32□□□□□ -0.76
KDM5A-201ENST00000399788 VPS37DQ86XT2 251 aa10.32□□□□□ -0.76
KDM5A-201ENST00000399788 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
KDM5A-201ENST00000399788 TSR1Q2NL82 804 aaKnown RBP10.31□□□□□ -0.76
KDM5A-201ENST00000399788 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
KDM5A-201ENST00000399788 CSPP1Q1MSJ5 1256 aa10.3□□□□□ -0.76
KDM5A-201ENST00000399788 GBP4Q96PP9 640 aa10.3□□□□□ -0.76
KDM5A-201ENST00000399788 WASHC2CQ9Y4E1 1318 aa10.3□□□□□ -0.76
KDM5A-201ENST00000399788 CCDC43Q96MW1 224 aaKnown RBP10.3□□□□□ -0.76
KDM5A-201ENST00000399788 CARMIL2Q6F5E8 1435 aa10.3□□□□□ -0.76
KDM5A-201ENST00000399788 KIF3BO15066 747 aa10.3□□□□□ -0.76
KDM5A-201ENST00000399788 SAMD1Q6SPF0 538 aaPredicted RBP10.3□□□□□ -0.76
KDM5A-201ENST00000399788 LMOD3Q0VAK6 560 aa10.29□□□□□ -0.76
KDM5A-201ENST00000399788 NUTM2DQ5VT03 806 aaPredicted RBP10.29□□□□□ -0.76
KDM5A-201ENST00000399788 SYNE3Q6ZMZ3 975 aa10.29□□□□□ -0.76
KDM5A-201ENST00000399788 DHX16O60231 1041 aaKnown RBP10.29□□□□□ -0.76
KDM5A-201ENST00000399788 PTMSP20962 102 aa10.29□□□□□ -0.76
KDM5A-201ENST00000399788 RWDD1Q9H446 243 aaPredicted RBP10.29□□□□□ -0.76
KDM5A-201ENST00000399788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.29□□□□□ -0.766e-7■■■□□ 15
KDM5A-201ENST00000399788 TPM2P07951 284 aa10.29□□□□□ -0.76
KDM5A-201ENST00000399788 SIN3AQ96ST3 1273 aa10.29□□□□□ -0.76
KDM5A-201ENST00000399788 NGEFQ8N5V2 710 aa10.28□□□□□ -0.76
KDM5A-201ENST00000399788 CCAR1Q8IX12 1150 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms