RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 FTSJ3Q8IY81 847 aaKnown RBP14.24□□□□□ -0.13
CACNA1C-217ENST00000399641 RGS3P49796 1198 aa14.24□□□□□ -0.13
CACNA1C-217ENST00000399641 SETQ01105 290 aaPredicted RBP14.23□□□□□ -0.13
CACNA1C-217ENST00000399641 VPS53Q5VIR6 699 aa14.23□□□□□ -0.13
CACNA1C-217ENST00000399641 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
CACNA1C-217ENST00000399641 NUDCQ9Y266 331 aa14.22□□□□□ -0.13
CACNA1C-217ENST00000399641 CDCA8Q53HL2 280 aa14.21□□□□□ -0.13
CACNA1C-217ENST00000399641 SAFB2Q14151 953 aaKnown RBP eCLIP14.2□□□□□ -0.14
CACNA1C-217ENST00000399641 SRPK2P78362 688 aaKnown RBP14.2□□□□□ -0.14
CACNA1C-217ENST00000399641 GTF2E1P29083 439 aaPredicted RBP14.2□□□□□ -0.14
CACNA1C-217ENST00000399641 MRS2Q9HD23 443 aa14.19□□□□□ -0.14
CACNA1C-217ENST00000399641 SF3B2Q13435 895 aaKnown RBP14.18□□□□□ -0.14
CACNA1C-217ENST00000399641 EVA1CP58658 441 aa14.18□□□□□ -0.14
CACNA1C-217ENST00000399641 GZF1Q9H116 711 aaPredicted RBP14.17□□□□□ -0.14
CACNA1C-217ENST00000399641 CWC22Q9HCG8 908 aaKnown RBP14.17□□□□□ -0.14
CACNA1C-217ENST00000399641 STK26Q9P289 416 aa14.17□□□□□ -0.14
CACNA1C-217ENST00000399641 KNSTRNQ9Y448 316 aa14.17□□□□□ -0.14
CACNA1C-217ENST00000399641 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
CACNA1C-217ENST00000399641 CEP89Q96ST8 783 aa14.16□□□□□ -0.14
CACNA1C-217ENST00000399641 FRAT1Q92837 279 aaPredicted RBP14.15□□□□□ -0.14
CACNA1C-217ENST00000399641 APBB1O00213 710 aa14.15□□□□□ -0.14
CACNA1C-217ENST00000399641 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.15
CACNA1C-217ENST00000399641 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
CACNA1C-217ENST00000399641 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
CACNA1C-217ENST00000399641 PES1O00541 588 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-217ENST00000399641 RRP12Q5JTH9 1297 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-217ENST00000399641 RASSF8Q8NHQ8 419 aa14.12□□□□□ -0.15
CACNA1C-217ENST00000399641 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
CACNA1C-217ENST00000399641 RB1CC1Q8TDY2 1594 aa14.11□□□□□ -0.15
CACNA1C-217ENST00000399641 CCAR2Q8N163 923 aaKnown RBP14.11□□□□□ -0.15
CACNA1C-217ENST00000399641 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
CACNA1C-217ENST00000399641 VSIG10Q8N0Z9 540 aa14.1□□□□□ -0.15
CACNA1C-217ENST00000399641 PLCD4Q9BRC7 762 aa14.1□□□□□ -0.15
CACNA1C-217ENST00000399641 PPP1R1BQ9UD71 204 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-217ENST00000399641 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.08□□□□□ -0.161e-7■■■■■ 115.4
CACNA1C-217ENST00000399641 FRAT2O75474 233 aaPredicted RBP14.08□□□□□ -0.16
CACNA1C-217ENST00000399641 EIF4G1Q04637 1599 aaKnown RBP14.07□□□□□ -0.16
CACNA1C-217ENST00000399641 AK7Q96M32 723 aa14.07□□□□□ -0.16
CACNA1C-217ENST00000399641 HSCBQ8IWL3 235 aa14.06□□□□□ -0.16
CACNA1C-217ENST00000399641 CHMP3Q9Y3E7 222 aa14.06□□□□□ -0.16
CACNA1C-217ENST00000399641 CTDP1Q9Y5B0 961 aaPredicted RBP14.05□□□□□ -0.16
CACNA1C-217ENST00000399641 NOL8Q76FK4 1167 aaKnown RBP14.05□□□□□ -0.16
CACNA1C-217ENST00000399641 NGDNQ8NEJ9 315 aaKnown RBP14.04□□□□□ -0.16
CACNA1C-217ENST00000399641 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-217ENST00000399641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.03□□□□□ -0.16
CACNA1C-217ENST00000399641 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
CACNA1C-217ENST00000399641 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.16
CACNA1C-217ENST00000399641 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.16
CACNA1C-217ENST00000399641 FOXD4L5Q5VV16 416 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-217ENST00000399641 FOXD4L4Q8WXT5 416 aaPredicted RBP14.02□□□□□ -0.17
CACNA1C-217ENST00000399641 RAD21O60216 631 aa14.01□□□□□ -0.17
CACNA1C-217ENST00000399641 MARCH6O60337 910 aa14.01□□□□□ -0.17
CACNA1C-217ENST00000399641 DEKP35659 375 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-217ENST00000399641 NOP58Q9Y2X3 529 aaKnown RBP14.01□□□□□ -0.17
CACNA1C-217ENST00000399641 TRIM34Q9BYJ4 488 aa14□□□□□ -0.17
CACNA1C-217ENST00000399641 FBXW7Q969H0 707 aa14□□□□□ -0.17
CACNA1C-217ENST00000399641 TPM4P67936 248 aa13.99□□□□□ -0.17
CACNA1C-217ENST00000399641 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
CACNA1C-217ENST00000399641 ZNF771Q7L3S4 317 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-217ENST00000399641 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-217ENST00000399641 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-217ENST00000399641 CLIP1P30622 1438 aa13.97□□□□□ -0.17
CACNA1C-217ENST00000399641 TPM3P06753 285 aa13.97□□□□□ -0.17
CACNA1C-217ENST00000399641 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
CACNA1C-217ENST00000399641 LTV1Q96GA3 475 aaPredicted RBP13.96□□□□□ -0.17
CACNA1C-217ENST00000399641 MCCP23508 829 aa13.96□□□□□ -0.17
CACNA1C-217ENST00000399641 CCNB3Q8WWL7 1395 aa13.96□□□□□ -0.17
CACNA1C-217ENST00000399641 CHMP4BQ9H444 224 aaKnown RBP13.95□□□□□ -0.18
CACNA1C-217ENST00000399641 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
CACNA1C-217ENST00000399641 TPD52L1Q16890 204 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-217ENST00000399641 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
CACNA1C-217ENST00000399641 SUPT16HQ9Y5B9 1047 aaKnown RBP13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 MAP7D2Q96T17 732 aa13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 ZNF592Q92610 1267 aa13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 SAMD1Q6SPF0 538 aaPredicted RBP13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 TCEAL9Q9UHQ7 104 aa13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 CARMIL2Q6F5E8 1435 aa13.92□□□□□ -0.18
CACNA1C-217ENST00000399641 ZCCHC6Q5VYS8 1495 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-217ENST00000399641 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
CACNA1C-217ENST00000399641 AMPHP49418 695 aa13.91□□□□□ -0.18
CACNA1C-217ENST00000399641 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
CACNA1C-217ENST00000399641 NUTM2DQ5VT03 806 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-217ENST00000399641 MORC1Q86VD1 984 aa13.9□□□□□ -0.18
CACNA1C-217ENST00000399641 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
CACNA1C-217ENST00000399641 PIP4K2BP78356 416 aa13.9□□□□□ -0.19
CACNA1C-217ENST00000399641 ATF3P18847 181 aa13.89□□□□□ -0.19
CACNA1C-217ENST00000399641 WASHC2CQ9Y4E1 1318 aa13.89□□□□□ -0.19
CACNA1C-217ENST00000399641 EFCAB2Q5VUJ9 269 aa13.89□□□□□ -0.19
CACNA1C-217ENST00000399641 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-217ENST00000399641 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-217ENST00000399641 SLKQ9H2G2 1235 aaPredicted RBP13.88□□□□□ -0.19
CACNA1C-217ENST00000399641 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-217ENST00000399641 KIAA1211Q6ZU35 1233 aa13.87□□□□□ -0.19
CACNA1C-217ENST00000399641 CCDC180Q9P1Z9 1646 aa13.87□□□□□ -0.19
CACNA1C-217ENST00000399641 CCAR1Q8IX12 1150 aaKnown RBP13.87□□□□□ -0.19
CACNA1C-217ENST00000399641 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNA1C-217ENST00000399641 TMF1P82094 1093 aa13.86□□□□□ -0.19
CACNA1C-217ENST00000399641 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
CACNA1C-217ENST00000399641 HTATSF1O43719 755 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-217ENST00000399641 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms