RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 GOLGA6L6A8MZA4 724 aa27.37■■□□□ 1.97
ANKRD28-201ENST00000399451 ARHGAP35Q9NRY4 1499 aa27.37■■□□□ 1.97
ANKRD28-201ENST00000399451 STK26Q9P289 416 aa27.37■■□□□ 1.97
ANKRD28-201ENST00000399451 PAK3O75914 559 aaPredicted RBP27.36■■□□□ 1.97
ANKRD28-201ENST00000399451 ISY1Q9ULR0 285 aaKnown RBP27.35■■□□□ 1.97
ANKRD28-201ENST00000399451 CUX2O14529 1486 aa27.33■■□□□ 1.97
ANKRD28-201ENST00000399451 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
ANKRD28-201ENST00000399451 VPS8Q8N3P4 1428 aa27.32■■□□□ 1.96
ANKRD28-201ENST00000399451 CSB-PGBD3P0DP91 1061 aa27.32■■□□□ 1.96
ANKRD28-201ENST00000399451 L1TD1Q5T7N2 865 aaKnown RBP27.3■■□□□ 1.96
ANKRD28-201ENST00000399451 RBM19Q9Y4C8 960 aaKnown RBP27.3■■□□□ 1.96
ANKRD28-201ENST00000399451 MORC1Q86VD1 984 aa27.3■■□□□ 1.96
ANKRD28-201ENST00000399451 KTN1Q86UP2 1357 aaKnown RBP27.29■■□□□ 1.96
ANKRD28-201ENST00000399451 CLSTN1O94985 981 aa27.29■■□□□ 1.96
ANKRD28-201ENST00000399451 CCDC9Q9Y3X0 531 aaKnown RBP27.29■■□□□ 1.96
ANKRD28-201ENST00000399451 MCCP23508 829 aa27.25■■□□□ 1.95
ANKRD28-201ENST00000399451 DEKP35659 375 aaKnown RBP27.25■■□□□ 1.95
ANKRD28-201ENST00000399451 HDGFL2Q7Z4V5 671 aaPredicted RBP27.25■■□□□ 1.95
ANKRD28-201ENST00000399451 CFAP44Q96MT7 982 aa27.25■■□□□ 1.95
ANKRD28-201ENST00000399451 ZNF330Q9Y3S2 320 aaPredicted RBP27.24■■□□□ 1.95
ANKRD28-201ENST00000399451 NRDCO43847 1150 aa27.22■■□□□ 1.95
ANKRD28-201ENST00000399451 CECR2Q9BXF3 1484 aa27.22■■□□□ 1.95
ANKRD28-201ENST00000399451 GOLGA6L4A6NEF3 574 aa27.21■■□□□ 1.95
ANKRD28-201ENST00000399451 NCBP3Q53F19 620 aaKnown RBP27.21■■□□□ 1.95
ANKRD28-201ENST00000399451 SPRYD3Q8NCJ5 442 aa27.2■■□□□ 1.94
ANKRD28-201ENST00000399451 TMX4Q9H1E5 349 aaPredicted RBP27.19■■□□□ 1.94
ANKRD28-201ENST00000399451 CARMIL2Q6F5E8 1435 aa27.18■■□□□ 1.94
ANKRD28-201ENST00000399451 MSNP26038 577 aaKnown RBP27.18■■□□□ 1.94
ANKRD28-201ENST00000399451 PKD2Q13563 968 aa27.18■■□□□ 1.94
ANKRD28-201ENST00000399451 CHAF1AQ13111 956 aaPredicted RBP27.16■■□□□ 1.94
ANKRD28-201ENST00000399451 RCAN3Q9UKA8 241 aa27.15■■□□□ 1.94
ANKRD28-201ENST00000399451 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
ANKRD28-201ENST00000399451 RALBP1Q15311 655 aa27.14■■□□□ 1.94
ANKRD28-201ENST00000399451 RAB3GAP2Q9H2M9 1393 aa27.14■■□□□ 1.94
ANKRD28-201ENST00000399451 IPO8O15397 1037 aaKnown RBP27.13■■□□□ 1.93
ANKRD28-201ENST00000399451 ROCK2O75116 1388 aaKnown RBP27.13■■□□□ 1.93
ANKRD28-201ENST00000399451 FOXD1Q16676 465 aa27.12■■□□□ 1.93
ANKRD28-201ENST00000399451 ABCC8Q09428 1581 aa27.1■■□□□ 1.93
ANKRD28-201ENST00000399451 TCERG1O14776 1098 aaKnown RBP27.09■■□□□ 1.93
ANKRD28-201ENST00000399451 PTMSP20962 102 aa27.08■■□□□ 1.93
ANKRD28-201ENST00000399451 MPHOSPH9Q99550 1183 aa27.07■■□□□ 1.92
ANKRD28-201ENST00000399451 RWDD1Q9H446 243 aaPredicted RBP27.06■■□□□ 1.92
ANKRD28-201ENST00000399451 CCDC88BA6NC98 1476 aa27.05■■□□□ 1.92
ANKRD28-201ENST00000399451 EID1Q9Y6B2 187 aa27.05■■□□□ 1.92
ANKRD28-201ENST00000399451 GBP4Q96PP9 640 aa27.05■■□□□ 1.92
ANKRD28-201ENST00000399451 DRC7Q8IY82 874 aa27.04■■□□□ 1.92
ANKRD28-201ENST00000399451 GNL2Q13823 731 aaKnown RBP27.04■■□□□ 1.92
ANKRD28-201ENST00000399451 EFCAB2Q5VUJ9 269 aa27.04■■□□□ 1.92
ANKRD28-201ENST00000399451 APBB1O00213 710 aa27.03■■□□□ 1.92
ANKRD28-201ENST00000399451 CALD1Q05682 793 aaKnown RBP27.03■■□□□ 1.92
ANKRD28-201ENST00000399451 PDS5BQ9NTI5 1447 aa27.02■■□□□ 1.92
ANKRD28-201ENST00000399451 ITPRIPQ8IWB1 547 aa27.01■■□□□ 1.92
ANKRD28-201ENST00000399451 FMN1Q68DA7 1419 aa27.01■■□□□ 1.91
ANKRD28-201ENST00000399451 U2AF1L5P0DN76 240 aaPredicted RBP26.99■■□□□ 1.91
ANKRD28-201ENST00000399451 U2AF1Q01081 240 aaKnown RBP eCLIP26.99■■□□□ 1.911e-6■■■■□ 24.5
ANKRD28-201ENST00000399451 G3V3G9 751 aa26.98■■□□□ 1.91
ANKRD28-201ENST00000399451 DCAF8Q5TAQ9 597 aa26.98■■□□□ 1.91
ANKRD28-201ENST00000399451 KIAA1211Q6ZU35 1233 aa26.98■■□□□ 1.91
ANKRD28-201ENST00000399451 PMFBP1Q8TBY8 1022 aa26.98■■□□□ 1.91
ANKRD28-201ENST00000399451 NUP155O75694 1391 aa26.97■■□□□ 1.91
ANKRD28-201ENST00000399451 ANKRD30AQ9BXX3 1397 aa26.97■■□□□ 1.91
ANKRD28-201ENST00000399451 EIF3AQ14152 1382 aaKnown RBP26.97■■□□□ 1.91
ANKRD28-201ENST00000399451 CHMP3Q9Y3E7 222 aa26.95■■□□□ 1.91
ANKRD28-201ENST00000399451 KIF3BO15066 747 aa26.94■■□□□ 1.9
ANKRD28-201ENST00000399451 MROH2BQ7Z745 1585 aa26.94■■□□□ 1.9
ANKRD28-201ENST00000399451 TAF7LQ5H9L4 462 aa26.94■■□□□ 1.9
ANKRD28-201ENST00000399451 NGDNQ8NEJ9 315 aaKnown RBP26.93■■□□□ 1.9
ANKRD28-201ENST00000399451 GORABQ5T7V8 394 aa26.92■■□□□ 1.9
ANKRD28-201ENST00000399451 SLKQ9H2G2 1235 aaPredicted RBP26.92■■□□□ 1.9
ANKRD28-201ENST00000399451 TSHZ2Q9NRE2 1034 aa26.92■■□□□ 1.9
ANKRD28-201ENST00000399451 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
ANKRD28-201ENST00000399451 SPAG9O60271 1321 aaKnown RBP26.91■■□□□ 1.9
ANKRD28-201ENST00000399451 GZF1Q9H116 711 aaPredicted RBP26.89■■□□□ 1.89
ANKRD28-201ENST00000399451 IPO9Q96P70 1041 aaKnown RBP26.88■■□□□ 1.89
ANKRD28-201ENST00000399451 WASHC2CQ9Y4E1 1318 aa26.86■■□□□ 1.89
ANKRD28-201ENST00000399451 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
ANKRD28-201ENST00000399451 MFAP1P55081 439 aaKnown RBP26.86■■□□□ 1.89
ANKRD28-201ENST00000399451 STK31Q9BXU1 1019 aa26.86■■□□□ 1.89
ANKRD28-201ENST00000399451 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
ANKRD28-201ENST00000399451 KIAA2012Q0VF49 1180 aa26.84■■□□□ 1.89
ANKRD28-201ENST00000399451 SYAP1Q96A49 352 aaPredicted RBP26.84■■□□□ 1.89
ANKRD28-201ENST00000399451 SMC4Q9NTJ3 1288 aa26.84■■□□□ 1.89
ANKRD28-201ENST00000399451 PDE3BQ13370 1112 aa26.83■■□□□ 1.89
ANKRD28-201ENST00000399451 CHMP4AQ9BY43 222 aa26.83■■□□□ 1.89
ANKRD28-201ENST00000399451 L3MBTL2Q969R5 705 aa26.82■■□□□ 1.88
ANKRD28-201ENST00000399451 LTV1Q96GA3 475 aaPredicted RBP26.82■■□□□ 1.88
ANKRD28-201ENST00000399451 HTATSF1O43719 755 aaKnown RBP26.82■■□□□ 1.88
ANKRD28-201ENST00000399451 TERF2IPQ9NYB0 399 aa26.82■■□□□ 1.88
ANKRD28-201ENST00000399451 AMPHP49418 695 aa26.82■■□□□ 1.88
ANKRD28-201ENST00000399451 HNRNPMP52272 730 aaKnown RBP eCLIP26.81■■□□□ 1.887e-7■■■■□ 22.6
ANKRD28-201ENST00000399451 NUTM2FA1L443 756 aa26.81■■□□□ 1.88
ANKRD28-201ENST00000399451 NLRP13Q86W25 1043 aa26.81■■□□□ 1.88
ANKRD28-201ENST00000399451 GOLGA6L3A6NEY3 463 aa26.8■■□□□ 1.88
ANKRD28-201ENST00000399451 GTF2E1P29083 439 aaPredicted RBP26.79■■□□□ 1.88
ANKRD28-201ENST00000399451 CENPJQ9HC77 1338 aaPredicted RBP26.78■■□□□ 1.88
ANKRD28-201ENST00000399451 PHLDB1Q86UU1 1377 aa26.78■■□□□ 1.88
ANKRD28-201ENST00000399451 CCDC146Q8IYE0 955 aa26.77■■□□□ 1.88
ANKRD28-201ENST00000399451 GPATCH3Q96I76 525 aa26.76■■□□□ 1.88
ANKRD28-201ENST00000399451 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
ANKRD28-201ENST00000399451 KIF15Q9NS87 1388 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms