RNA–Protein interactions for RNA: ENST00000399410.7

ABCC1-202, Transcript of ATP binding cassette subfamily C member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-202ENST00000399410 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
ABCC1-202ENST00000399410 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
ABCC1-202ENST00000399410 MLECQ14165 292 aa19.73■□□□□ 0.75
ABCC1-202ENST00000399410 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
ABCC1-202ENST00000399410 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
ABCC1-202ENST00000399410 TRIM44Q96DX7 344 aaPredicted RBP19.7■□□□□ 0.74
ABCC1-202ENST00000399410 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
ABCC1-202ENST00000399410 RALBP1Q15311 655 aa19.69■□□□□ 0.74
ABCC1-202ENST00000399410 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
ABCC1-202ENST00000399410 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
ABCC1-202ENST00000399410 GLIPR1L2Q4G1C9 344 aa19.67■□□□□ 0.74
ABCC1-202ENST00000399410 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
ABCC1-202ENST00000399410 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
ABCC1-202ENST00000399410 STK26Q9P289 416 aa19.65■□□□□ 0.74
ABCC1-202ENST00000399410 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.74
ABCC1-202ENST00000399410 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.737e-6■■■□□ 16.1
ABCC1-202ENST00000399410 ERICH6BQ5W0A0 696 aa19.62■□□□□ 0.73
ABCC1-202ENST00000399410 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
ABCC1-202ENST00000399410 SOX12O15370 315 aa19.61■□□□□ 0.73
ABCC1-202ENST00000399410 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
ABCC1-202ENST00000399410 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
ABCC1-202ENST00000399410 KIF3BO15066 747 aa19.6■□□□□ 0.73
ABCC1-202ENST00000399410 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
ABCC1-202ENST00000399410 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
ABCC1-202ENST00000399410 JPH4Q96JJ6 628 aa19.58■□□□□ 0.72
ABCC1-202ENST00000399410 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
ABCC1-202ENST00000399410 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
ABCC1-202ENST00000399410 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
ABCC1-202ENST00000399410 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
ABCC1-202ENST00000399410 U2AF1L5P0DN76 240 aaPredicted RBP19.56■□□□□ 0.72
ABCC1-202ENST00000399410 U2AF1Q01081 240 aaKnown RBP eCLIP19.56■□□□□ 0.727e-8■■■■□ 23.5
ABCC1-202ENST00000399410 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
ABCC1-202ENST00000399410 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
ABCC1-202ENST00000399410 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
ABCC1-202ENST00000399410 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
ABCC1-202ENST00000399410 CDK11BP21127 795 aaKnown RBP19.54■□□□□ 0.72
ABCC1-202ENST00000399410 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.71
ABCC1-202ENST00000399410 HSCBQ8IWL3 235 aa19.52■□□□□ 0.71
ABCC1-202ENST00000399410 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
ABCC1-202ENST00000399410 KCNJ4P48050 445 aa19.51■□□□□ 0.71
ABCC1-202ENST00000399410 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
ABCC1-202ENST00000399410 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
ABCC1-202ENST00000399410 FGD1P98174 961 aa19.48■□□□□ 0.71
ABCC1-202ENST00000399410 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
ABCC1-202ENST00000399410 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
ABCC1-202ENST00000399410 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
ABCC1-202ENST00000399410 RWDD1Q9H446 243 aaPredicted RBP19.45■□□□□ 0.7
ABCC1-202ENST00000399410 MCCP23508 829 aa19.44■□□□□ 0.7
ABCC1-202ENST00000399410 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
ABCC1-202ENST00000399410 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
ABCC1-202ENST00000399410 NPHP1O15259 732 aa19.43■□□□□ 0.7
ABCC1-202ENST00000399410 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
ABCC1-202ENST00000399410 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
ABCC1-202ENST00000399410 ITPRIPQ8IWB1 547 aa19.43■□□□□ 0.7
ABCC1-202ENST00000399410 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
ABCC1-202ENST00000399410 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
ABCC1-202ENST00000399410 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
ABCC1-202ENST00000399410 IGF1RP08069 1367 aa19.41■□□□□ 0.7
ABCC1-202ENST00000399410 DNTTIP2Q5QJE6 756 aaKnown RBP19.4■□□□□ 0.7
ABCC1-202ENST00000399410 PTPRGP23470 1445 aa19.4■□□□□ 0.7
ABCC1-202ENST00000399410 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
ABCC1-202ENST00000399410 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
ABCC1-202ENST00000399410 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
ABCC1-202ENST00000399410 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
ABCC1-202ENST00000399410 NAP1L2Q9ULW6 460 aaPredicted RBP19.38■□□□□ 0.69
ABCC1-202ENST00000399410 PLCB2Q00722 1185 aa19.37■□□□□ 0.69
ABCC1-202ENST00000399410 APBB1O00213 710 aa19.37■□□□□ 0.69
ABCC1-202ENST00000399410 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
ABCC1-202ENST00000399410 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
ABCC1-202ENST00000399410 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
ABCC1-202ENST00000399410 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
ABCC1-202ENST00000399410 SPRYD3Q8NCJ5 442 aa19.35■□□□□ 0.69
ABCC1-202ENST00000399410 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
ABCC1-202ENST00000399410 CHMP4AQ9BY43 222 aa19.35■□□□□ 0.69
ABCC1-202ENST00000399410 GOLGA6L4A6NEF3 574 aa19.34■□□□□ 0.69
ABCC1-202ENST00000399410 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
ABCC1-202ENST00000399410 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
ABCC1-202ENST00000399410 EID1Q9Y6B2 187 aa19.33■□□□□ 0.69
ABCC1-202ENST00000399410 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.69
ABCC1-202ENST00000399410 PANK3Q9H999 370 aa19.33■□□□□ 0.68
ABCC1-202ENST00000399410 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
ABCC1-202ENST00000399410 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
ABCC1-202ENST00000399410 CSB-PGBD3P0DP91 1061 aa19.31■□□□□ 0.68
ABCC1-202ENST00000399410 USP47Q96K76 1375 aa19.3■□□□□ 0.68
ABCC1-202ENST00000399410 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
ABCC1-202ENST00000399410 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
ABCC1-202ENST00000399410 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
ABCC1-202ENST00000399410 LMOD3Q0VAK6 560 aa19.3■□□□□ 0.68
ABCC1-202ENST00000399410 KIAA1211Q6ZU35 1233 aa19.3■□□□□ 0.68
ABCC1-202ENST00000399410 MYOM3Q5VTT5 1437 aa19.29■□□□□ 0.68
ABCC1-202ENST00000399410 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
ABCC1-202ENST00000399410 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
ABCC1-202ENST00000399410 NAP1L5Q96NT1 182 aaPredicted RBP19.28■□□□□ 0.68
ABCC1-202ENST00000399410 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.68
ABCC1-202ENST00000399410 TSHZ2Q9NRE2 1034 aa19.27■□□□□ 0.68
ABCC1-202ENST00000399410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
ABCC1-202ENST00000399410 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
ABCC1-202ENST00000399410 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
ABCC1-202ENST00000399410 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
ABCC1-202ENST00000399410 HMMRO75330 724 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms