RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 ABCC2Q92887 1545 aa19.55■□□□□ 0.72
SMIM11A-201ENST00000399292 KIAA0556O60303 1618 aa19.54■□□□□ 0.72
SMIM11A-201ENST00000399292 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
SMIM11A-201ENST00000399292 P3H3Q8IVL6 736 aa19.5■□□□□ 0.71
SMIM11A-201ENST00000399292 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
SMIM11A-201ENST00000399292 ASXL2Q76L83 1435 aa19.46■□□□□ 0.71
SMIM11A-201ENST00000399292 PLB1Q6P1J6 1458 aa19.46■□□□□ 0.71
SMIM11A-201ENST00000399292 RANGAP1P46060 587 aaPredicted RBP19.45■□□□□ 0.7
SMIM11A-201ENST00000399292 KDM5BQ9UGL1 1544 aa19.45■□□□□ 0.7
SMIM11A-201ENST00000399292 DIP2BQ9P265 1576 aa19.44■□□□□ 0.7
SMIM11A-201ENST00000399292 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
SMIM11A-201ENST00000399292 MNX1P50219 401 aaPredicted RBP19.39■□□□□ 0.69
SMIM11A-201ENST00000399292 CLCN6P51797 869 aa19.39■□□□□ 0.69
SMIM11A-201ENST00000399292 KIF21BO75037 1637 aa19.38■□□□□ 0.69
SMIM11A-201ENST00000399292 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
SMIM11A-201ENST00000399292 ZNF579Q8NAF0 562 aaKnown RBP19.37■□□□□ 0.69
SMIM11A-201ENST00000399292 ABCA8O94911 1581 aa19.36■□□□□ 0.69
SMIM11A-201ENST00000399292 ZCCHC11Q5TAX3 1644 aaKnown RBP19.35■□□□□ 0.69
SMIM11A-201ENST00000399292 SAMD9Q5K651 1589 aa19.33■□□□□ 0.69
SMIM11A-201ENST00000399292 ARID3CA6NKF2 412 aa19.33■□□□□ 0.68
SMIM11A-201ENST00000399292 KCNH8Q96L42 1107 aa19.33■□□□□ 0.68
SMIM11A-201ENST00000399292 EPRSP07814 1512 aaKnown RBP19.33■□□□□ 0.68
SMIM11A-201ENST00000399292 GLI2P10070 1586 aa19.32■□□□□ 0.68
SMIM11A-201ENST00000399292 WDR7Q9Y4E6 1490 aa19.3■□□□□ 0.68
SMIM11A-201ENST00000399292 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
SMIM11A-201ENST00000399292 ATP10BO94823 1461 aa19.28■□□□□ 0.68
SMIM11A-201ENST00000399292 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
SMIM11A-201ENST00000399292 PAK3O75914 559 aaPredicted RBP19.27■□□□□ 0.68
SMIM11A-201ENST00000399292 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
SMIM11A-201ENST00000399292 KDM6BO15054 1643 aa19.22■□□□□ 0.67
SMIM11A-201ENST00000399292 RAPGEF6Q8TEU7 1601 aa19.22■□□□□ 0.67
SMIM11A-201ENST00000399292 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
SMIM11A-201ENST00000399292 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
SMIM11A-201ENST00000399292 MAP3K4Q9Y6R4 1608 aa19.19■□□□□ 0.66
SMIM11A-201ENST00000399292 FKBP8Q14318 412 aa19.19■□□□□ 0.66
SMIM11A-201ENST00000399292 POTEIP0CG38 1075 aa19.18■□□□□ 0.66
SMIM11A-201ENST00000399292 NUP153P49790 1475 aaKnown RBP19.17■□□□□ 0.66
SMIM11A-201ENST00000399292 PLEKHD1A6NEE1 506 aa19.17■□□□□ 0.66
SMIM11A-201ENST00000399292 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
SMIM11A-201ENST00000399292 ATP1B4Q9UN42 357 aaPredicted RBP19.15■□□□□ 0.66
SMIM11A-201ENST00000399292 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
SMIM11A-201ENST00000399292 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
SMIM11A-201ENST00000399292 MAGI3Q5TCQ9 1506 aa19.13■□□□□ 0.65
SMIM11A-201ENST00000399292 COL17A1Q9UMD9 1497 aaPredicted RBP19.11■□□□□ 0.65
SMIM11A-201ENST00000399292 MIER1Q8N108 512 aa19.11■□□□□ 0.65
SMIM11A-201ENST00000399292 PHF12Q96QT6 1004 aa19.11■□□□□ 0.65
SMIM11A-201ENST00000399292 PLEKHG5O94827 1062 aa19.1■□□□□ 0.65
SMIM11A-201ENST00000399292 DCBLD2Q96PD2 775 aa19.1■□□□□ 0.65
SMIM11A-201ENST00000399292 CFAP43Q8NDM7 1665 aa19.1■□□□□ 0.65
SMIM11A-201ENST00000399292 GALR2O43603 387 aaPredicted RBP19.09■□□□□ 0.65
SMIM11A-201ENST00000399292 CDK11AQ9UQ88 783 aaPredicted RBP19.04■□□□□ 0.64
SMIM11A-201ENST00000399292 PHLDB1Q86UU1 1377 aa19.03■□□□□ 0.64
SMIM11A-201ENST00000399292 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
SMIM11A-201ENST00000399292 LHX8Q68G74 356 aa19.01■□□□□ 0.63
SMIM11A-201ENST00000399292 CDK13Q14004 1512 aaKnown RBP19■□□□□ 0.63
SMIM11A-201ENST00000399292 KDM4FA0A1W2PPD8 638 aa19■□□□□ 0.63
SMIM11A-201ENST00000399292 PLCD3Q8N3E9 789 aa18.98■□□□□ 0.63
SMIM11A-201ENST00000399292 TSPYL2Q9H2G4 693 aaPredicted RBP18.98■□□□□ 0.63
SMIM11A-201ENST00000399292 ARAP3Q8WWN8 1544 aa18.98■□□□□ 0.63
SMIM11A-201ENST00000399292 CLIP1P30622 1438 aa18.98■□□□□ 0.63
SMIM11A-201ENST00000399292 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
SMIM11A-201ENST00000399292 NEO1Q92859 1461 aa18.97■□□□□ 0.63
SMIM11A-201ENST00000399292 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
SMIM11A-201ENST00000399292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMIM11A-201ENST00000399292 CASKIN1Q8WXD9 1431 aa18.93■□□□□ 0.62
SMIM11A-201ENST00000399292 CCDC61Q9Y6R9 512 aa18.91■□□□□ 0.62
SMIM11A-201ENST00000399292 AKNAQ7Z591 1439 aa18.9■□□□□ 0.62
SMIM11A-201ENST00000399292 TROQ12816 1431 aaPredicted RBP18.89■□□□□ 0.61
SMIM11A-201ENST00000399292 FANCAO15360 1455 aa18.89■□□□□ 0.61
SMIM11A-201ENST00000399292 MS4A3Q96HJ5 214 aa18.88■□□□□ 0.61
SMIM11A-201ENST00000399292 PLCH2O75038 1416 aa18.88■□□□□ 0.61
SMIM11A-201ENST00000399292 LOC105371045A0A1W2PR82 267 aa18.87■□□□□ 0.61
SMIM11A-201ENST00000399292 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
SMIM11A-201ENST00000399292 TTC37Q6PGP7 1564 aa18.86■□□□□ 0.61
SMIM11A-201ENST00000399292 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
SMIM11A-201ENST00000399292 RASEFQ8IZ41 740 aa18.86■□□□□ 0.61
SMIM11A-201ENST00000399292 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
SMIM11A-201ENST00000399292 DENND4BO75064 1496 aaPredicted RBP18.85■□□□□ 0.61
SMIM11A-201ENST00000399292 PCF11O94913 1555 aaKnown RBP18.85■□□□□ 0.61
SMIM11A-201ENST00000399292 ADGRL1O94910 1474 aa18.84■□□□□ 0.61
SMIM11A-201ENST00000399292 FYCO1Q9BQS8 1478 aa18.84■□□□□ 0.61
SMIM11A-201ENST00000399292 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
SMIM11A-201ENST00000399292 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
SMIM11A-201ENST00000399292 KIF14Q15058 1648 aa18.81■□□□□ 0.6
SMIM11A-201ENST00000399292 LRRIQ1Q96JM4 1722 aa18.8■□□□□ 0.6
SMIM11A-201ENST00000399292 KIF12Q96FN5 646 aa18.79■□□□□ 0.6
SMIM11A-201ENST00000399292 FBXO3Q9UK99 471 aa18.79■□□□□ 0.6
SMIM11A-201ENST00000399292 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
SMIM11A-201ENST00000399292 ARID4BQ4LE39 1312 aaPredicted RBP18.75■□□□□ 0.59
SMIM11A-201ENST00000399292 FRMPD1Q5SYB0 1578 aa18.75■□□□□ 0.59
SMIM11A-201ENST00000399292 NUBP1P53384 320 aa18.74■□□□□ 0.59
SMIM11A-201ENST00000399292 ARHGAP5Q13017 1502 aa18.74■□□□□ 0.59
SMIM11A-201ENST00000399292 MYO5CQ9NQX4 1742 aa18.73■□□□□ 0.59
SMIM11A-201ENST00000399292 ASTLQ6HA08 431 aaPredicted RBP18.72■□□□□ 0.59
SMIM11A-201ENST00000399292 MTUS2Q5JR59 1369 aa18.71■□□□□ 0.59
SMIM11A-201ENST00000399292 AFAP1Q8N556 730 aa18.71■□□□□ 0.59
SMIM11A-201ENST00000399292 POGZQ7Z3K3 1410 aa18.71■□□□□ 0.59
SMIM11A-201ENST00000399292 RICTORQ6R327 1708 aa18.71■□□□□ 0.59
SMIM11A-201ENST00000399292 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
SMIM11A-201ENST00000399292 PELP1Q8IZL8 1130 aaKnown RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms