RNA–Protein interactions for RNA: ENST00000399237.6

RUNX1-204, Transcript of runt related transcription factor 1, humanhuman

TSL 5

Gene RUNX1, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-204ENST00000399237 ARHGEF40Q8TER5 1519 aa34.59■■■■□ 3.13
RUNX1-204ENST00000399237 PREX2Q70Z35 1606 aa34.58■■■■□ 3.13
RUNX1-204ENST00000399237 CDC42BPAQ5VT25 1732 aa34.55■■■■□ 3.12
RUNX1-204ENST00000399237 ARHGAP5Q13017 1502 aa34.55■■■■□ 3.12
RUNX1-204ENST00000399237 SCAPERQ9BY12 1400 aa34.55■■■■□ 3.12
RUNX1-204ENST00000399237 POGZQ7Z3K3 1410 aa34.54■■■■□ 3.12
RUNX1-204ENST00000399237 ARID4BQ4LE39 1312 aaPredicted RBP34.53■■■■□ 3.12
RUNX1-204ENST00000399237 SIGLEC1Q9BZZ2 1709 aa34.52■■■■□ 3.12
RUNX1-204ENST00000399237 ADAMTSL3P82987 1691 aa34.5■■■■□ 3.11
RUNX1-204ENST00000399237 YEATS2Q9ULM3 1422 aa34.49■■■■□ 3.11
RUNX1-204ENST00000399237 EFCAB2Q5VUJ9 269 aa34.49■■■■□ 3.11
RUNX1-204ENST00000399237 PTPRMP28827 1452 aa34.49■■■■□ 3.11
RUNX1-204ENST00000399237 ZFYVE16Q7Z3T8 1539 aa34.45■■■■□ 3.11
RUNX1-204ENST00000399237 BCORL1Q5H9F3 1711 aa34.44■■■■□ 3.1
RUNX1-204ENST00000399237 ABCC1P33527 1531 aa34.41■■■■□ 3.1
RUNX1-204ENST00000399237 ARHGEF12Q9NZN5 1544 aa34.41■■■■□ 3.1
RUNX1-204ENST00000399237 MADDQ8WXG6 1647 aa34.4■■■■□ 3.1
RUNX1-204ENST00000399237 KDM5CP41229 1560 aa34.4■■■■□ 3.1
RUNX1-204ENST00000399237 ITSN2Q9NZM3 1697 aa34.39■■■■□ 3.1
RUNX1-204ENST00000399237 MAGI2Q86UL8 1455 aa34.39■■■■□ 3.1
RUNX1-204ENST00000399237 GPATCH8Q9UKJ3 1502 aaKnown RBP34.37■■■■□ 3.09
RUNX1-204ENST00000399237 ZNF518AQ6AHZ1 1483 aa34.35■■■■□ 3.09
RUNX1-204ENST00000399237 SAMD9LQ8IVG5 1584 aa34.35■■■■□ 3.09
RUNX1-204ENST00000399237 EHBP1L1Q8N3D4 1523 aa34.34■■■■□ 3.09
RUNX1-204ENST00000399237 ILDR1Q86SU0 546 aaPredicted RBP34.33■■■■□ 3.09
RUNX1-204ENST00000399237 MTUS2Q5JR59 1369 aa34.32■■■■□ 3.08
RUNX1-204ENST00000399237 TRAPPC8Q9Y2L5 1435 aa34.31■■■■□ 3.08
RUNX1-204ENST00000399237 VPS8Q8N3P4 1428 aa34.3■■■■□ 3.08
RUNX1-204ENST00000399237 AFAP1Q8N556 730 aa34.3■■■■□ 3.08
RUNX1-204ENST00000399237 TIAM1Q13009 1591 aa34.3■■■■□ 3.08
RUNX1-204ENST00000399237 ABCA6Q8N139 1617 aa34.26■■■■□ 3.07
RUNX1-204ENST00000399237 DIP2CQ9Y2E4 1556 aa34.25■■■■□ 3.07
RUNX1-204ENST00000399237 RIMS1Q86UR5 1692 aaKnown RBP34.24■■■■□ 3.07
RUNX1-204ENST00000399237 SYCP2Q9BX26 1530 aa34.24■■■■□ 3.07
RUNX1-204ENST00000399237 ATP10AO60312 1499 aa34.23■■■■□ 3.07
RUNX1-204ENST00000399237 MLECQ14165 292 aa34.2■■■■□ 3.07
RUNX1-204ENST00000399237 KIDINS220Q9ULH0 1771 aa34.2■■■■□ 3.07
RUNX1-204ENST00000399237 CCNB3Q8WWL7 1395 aa34.2■■■■□ 3.07
RUNX1-204ENST00000399237 C9orf84Q5VXU9 1444 aa34.2■■■■□ 3.06
RUNX1-204ENST00000399237 MLH3Q9UHC1 1453 aa34.2■■■■□ 3.06
RUNX1-204ENST00000399237 PLPPR3Q6T4P5 718 aa34.18■■■■□ 3.06
RUNX1-204ENST00000399237 ZNF777Q9ULD5 760 aaPredicted RBP34.17■■■■□ 3.06
RUNX1-204ENST00000399237 LMTK3Q96Q04 1460 aa34.16■■■■□ 3.06
RUNX1-204ENST00000399237 SUPT6HQ7KZ85 1726 aaKnown RBP34.16■■■■□ 3.06
RUNX1-204ENST00000399237 NCOA2Q15596 1464 aa34.14■■■■□ 3.06
RUNX1-204ENST00000399237 REREQ9P2R6 1566 aa34.12■■■■□ 3.05
RUNX1-204ENST00000399237 FER1L4A9Z1Z3 1794 aa34.11■■■■□ 3.05
RUNX1-204ENST00000399237 CFDP1Q9UEE9 299 aaPredicted RBP34.11■■■■□ 3.05
RUNX1-204ENST00000399237 LRRC9Q6ZRR7 1453 aa34.09■■■■□ 3.05
RUNX1-204ENST00000399237 HNRNPMP52272 730 aaKnown RBP eCLIP34.09■■■■□ 3.05
RUNX1-204ENST00000399237 KIAA1107Q9UPP5 1409 aa34.08■■■■□ 3.05
RUNX1-204ENST00000399237 ZNF644Q9H582 1327 aaPredicted RBP34.07■■■■□ 3.05
RUNX1-204ENST00000399237 MYT1LQ9UL68 1186 aa34.07■■■■□ 3.04
RUNX1-204ENST00000399237 INO80Q9ULG1 1556 aaPredicted RBP34.06■■■■□ 3.04
RUNX1-204ENST00000399237 PLEKHH2Q8IVE3 1493 aa34.05■■■■□ 3.04
RUNX1-204ENST00000399237 MAP3K1Q13233 1512 aa34.04■■■■□ 3.04
RUNX1-204ENST00000399237 MBD5Q9P267 1494 aa34.01■■■■□ 3.04
RUNX1-204ENST00000399237 KANK4Q5T7N3 995 aaPredicted RBP34.01■■■■□ 3.03
RUNX1-204ENST00000399237 ATP7AQ04656 1500 aa34■■■■□ 3.03
RUNX1-204ENST00000399237 HSPA2P54652 639 aa33.99■■■■□ 3.03
RUNX1-204ENST00000399237 AGLP35573 1532 aa33.99■■■■□ 3.03
RUNX1-204ENST00000399237 CAMSAP2Q08AD1 1489 aa33.95■■■■□ 3.03
RUNX1-204ENST00000399237 SPAG9O60271 1321 aaKnown RBP33.94■■■■□ 3.02
RUNX1-204ENST00000399237 PLXNC1O60486 1568 aa33.91■■■■□ 3.02
RUNX1-204ENST00000399237 CEBPAP49715 358 aaPredicted RBP33.89■■■■□ 3.02
RUNX1-204ENST00000399237 ADGBQ8N7X0 1667 aa33.84■■■■□ 3.01
RUNX1-204ENST00000399237 CCDC141Q6ZP82 1450 aa33.82■■■■□ 3.01
RUNX1-204ENST00000399237 A2MP01023 1474 aa33.82■■■■□ 3
RUNX1-204ENST00000399237 FBXO41Q8TF61 875 aa33.81■■■■□ 3
RUNX1-204ENST00000399237 ARHGEF5Q12774 1597 aa33.81■■■■□ 3
RUNX1-204ENST00000399237 C3P01024 1663 aa33.8■■■■□ 3
RUNX1-204ENST00000399237 RTEL1-TNFRSF6BF6WH68 1400 aa33.78■■■■□ 3
RUNX1-204ENST00000399237 MYOM3Q5VTT5 1437 aa33.78■■■■□ 3
RUNX1-204ENST00000399237 PREX1Q8TCU6 1659 aa33.74■■■□□ 2.99
RUNX1-204ENST00000399237 ESF1Q9H501 851 aaKnown RBP33.73■■■□□ 2.99
RUNX1-204ENST00000399237 UHRF1BP1Q6BDS2 1440 aa33.7■■■□□ 2.99
RUNX1-204ENST00000399237 MIA2Q96PC5 1412 aa33.7■■■□□ 2.99
RUNX1-204ENST00000399237 MROH2AA6NES4 1674 aa33.68■■■□□ 2.98
RUNX1-204ENST00000399237 CLTCQ00610 1675 aaKnown RBP33.67■■■□□ 2.98
RUNX1-204ENST00000399237 MAST1Q9Y2H9 1570 aa33.66■■■□□ 2.98
RUNX1-204ENST00000399237 CNTLNQ9NXG0 1405 aa33.63■■■□□ 2.97
RUNX1-204ENST00000399237 APLP2Q06481 763 aa33.63■■■□□ 2.97
RUNX1-204ENST00000399237 PTPN23Q9H3S7 1636 aa33.63■■■□□ 2.97
RUNX1-204ENST00000399237 DHX29Q7Z478 1369 aaKnown RBP33.62■■■□□ 2.97
RUNX1-204ENST00000399237 RSPH4AQ5TD94 716 aa33.61■■■□□ 2.97
RUNX1-204ENST00000399237 CROCC2H7BZ55 1655 aa33.58■■■□□ 2.97
RUNX1-204ENST00000399237 FGD6Q6ZV73 1430 aa33.55■■■□□ 2.96
RUNX1-204ENST00000399237 GGT6Q6P531 493 aa33.55■■■□□ 2.96
RUNX1-204ENST00000399237 TCOF1Q13428 1488 aaKnown RBP33.54■■■□□ 2.96
RUNX1-204ENST00000399237 SETD1BQ9UPS6 1966 aaKnown RBP33.54■■■□□ 2.96
RUNX1-204ENST00000399237 ZMYM3Q14202 1370 aa33.52■■■□□ 2.96
RUNX1-204ENST00000399237 CERKQ8TCT0 537 aa33.52■■■□□ 2.96
RUNX1-204ENST00000399237 TSPY4P0CV99 314 aa33.5■■■□□ 2.95
RUNX1-204ENST00000399237 TSPY10P0CW01 314 aa33.5■■■□□ 2.95
RUNX1-204ENST00000399237 ABCC5O15440 1437 aa33.5■■■□□ 2.95
RUNX1-204ENST00000399237 DNMT1P26358 1616 aaKnown RBP33.5■■■□□ 2.95
RUNX1-204ENST00000399237 DMRT2Q9Y5R5 561 aa33.49■■■□□ 2.95
RUNX1-204ENST00000399237 STRCQ7RTU9 1775 aa33.49■■■□□ 2.95
RUNX1-204ENST00000399237 KIF3BO15066 747 aa33.46■■■□□ 2.95
RUNX1-204ENST00000399237 NPATQ14207 1427 aa33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms