RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CFDP1Q9UEE9 299 aaPredicted RBP13.66□□□□□ -0.22
BRCC3-206ENST00000399042 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
BRCC3-206ENST00000399042 ABCC10Q5T3U5 1492 aa13.65□□□□□ -0.22
BRCC3-206ENST00000399042 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
BRCC3-206ENST00000399042 NCOA2Q15596 1464 aa13.64□□□□□ -0.23
BRCC3-206ENST00000399042 FAM50AQ14320 339 aaKnown RBP13.63□□□□□ -0.23
BRCC3-206ENST00000399042 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
BRCC3-206ENST00000399042 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
BRCC3-206ENST00000399042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.59□□□□□ -0.23
BRCC3-206ENST00000399042 PHLDB1Q86UU1 1377 aa13.58□□□□□ -0.23
BRCC3-206ENST00000399042 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
BRCC3-206ENST00000399042 DIP2BQ9P265 1576 aa13.58□□□□□ -0.24
BRCC3-206ENST00000399042 PLCH2O75038 1416 aa13.57□□□□□ -0.24
BRCC3-206ENST00000399042 MYOM3Q5VTT5 1437 aa13.57□□□□□ -0.24
BRCC3-206ENST00000399042 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
BRCC3-206ENST00000399042 GPATCH8Q9UKJ3 1502 aaKnown RBP13.56□□□□□ -0.24
BRCC3-206ENST00000399042 ITGAEP38570 1179 aa13.56□□□□□ -0.24
BRCC3-206ENST00000399042 GLI2P10070 1586 aa13.56□□□□□ -0.24
BRCC3-206ENST00000399042 TTC37Q6PGP7 1564 aa13.56□□□□□ -0.24
BRCC3-206ENST00000399042 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
BRCC3-206ENST00000399042 ABCA9Q8IUA7 1624 aa13.54□□□□□ -0.24
BRCC3-206ENST00000399042 FANCAO15360 1455 aa13.54□□□□□ -0.24
BRCC3-206ENST00000399042 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
BRCC3-206ENST00000399042 HNRNPMP52272 730 aaKnown RBP eCLIP13.52□□□□□ -0.25
BRCC3-206ENST00000399042 FGD6Q6ZV73 1430 aa13.52□□□□□ -0.25
BRCC3-206ENST00000399042 MIA2Q96PC5 1412 aa13.52□□□□□ -0.25
BRCC3-206ENST00000399042 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
BRCC3-206ENST00000399042 AKNAQ7Z591 1439 aa13.5□□□□□ -0.25
BRCC3-206ENST00000399042 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
BRCC3-206ENST00000399042 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
BRCC3-206ENST00000399042 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
BRCC3-206ENST00000399042 TSPOAP1O95153 1857 aa13.49□□□□□ -0.25
BRCC3-206ENST00000399042 TRIM26Q12899 539 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-206ENST00000399042 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 SCAPERQ9BY12 1400 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 RSPH4AQ5TD94 716 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 MAP3K4Q9Y6R4 1608 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 NEO1Q92859 1461 aa13.48□□□□□ -0.25
BRCC3-206ENST00000399042 PREX2Q70Z35 1606 aa13.47□□□□□ -0.25
BRCC3-206ENST00000399042 SLC4A2P04920 1241 aa13.47□□□□□ -0.25
BRCC3-206ENST00000399042 ARAP3Q8WWN8 1544 aa13.47□□□□□ -0.25
BRCC3-206ENST00000399042 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
BRCC3-206ENST00000399042 RAPGEF3O95398 923 aa13.46□□□□□ -0.25
BRCC3-206ENST00000399042 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
BRCC3-206ENST00000399042 CDC42BPAQ5VT25 1732 aa13.46□□□□□ -0.25
BRCC3-206ENST00000399042 CAMSAP2Q08AD1 1489 aa13.46□□□□□ -0.25
BRCC3-206ENST00000399042 CFAP74Q9C0B2 1584 aa13.45□□□□□ -0.26
BRCC3-206ENST00000399042 AFAP1Q8N556 730 aa13.45□□□□□ -0.26
BRCC3-206ENST00000399042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
BRCC3-206ENST00000399042 PTPN23Q9H3S7 1636 aa13.45□□□□□ -0.26
BRCC3-206ENST00000399042 RRBP1Q9P2E9 1410 aaKnown RBP13.44□□□□□ -0.26
BRCC3-206ENST00000399042 SPAG9O60271 1321 aaKnown RBP13.43□□□□□ -0.26
BRCC3-206ENST00000399042 DENND4BO75064 1496 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-206ENST00000399042 KIAA1107Q9UPP5 1409 aa13.43□□□□□ -0.26
BRCC3-206ENST00000399042 CDC42BPBQ9Y5S2 1711 aa13.43□□□□□ -0.26
BRCC3-206ENST00000399042 SYCP2Q9BX26 1530 aa13.41□□□□□ -0.26
BRCC3-206ENST00000399042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.41□□□□□ -0.26
BRCC3-206ENST00000399042 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
BRCC3-206ENST00000399042 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
BRCC3-206ENST00000399042 PCGF6Q9BYE7 350 aa13.4□□□□□ -0.26
BRCC3-206ENST00000399042 TRAPPC8Q9Y2L5 1435 aa13.39□□□□□ -0.27
BRCC3-206ENST00000399042 CCDC141Q6ZP82 1450 aa13.39□□□□□ -0.27
BRCC3-206ENST00000399042 ABCC1P33527 1531 aa13.39□□□□□ -0.27
BRCC3-206ENST00000399042 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
BRCC3-206ENST00000399042 RRP7BPQ9NSQ0 103 aa13.38□□□□□ -0.27
BRCC3-206ENST00000399042 DAPK1P53355 1430 aa13.38□□□□□ -0.27
BRCC3-206ENST00000399042 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
BRCC3-206ENST00000399042 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
BRCC3-206ENST00000399042 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
BRCC3-206ENST00000399042 ABCC5O15440 1437 aa13.37□□□□□ -0.27
BRCC3-206ENST00000399042 MBD5Q9P267 1494 aa13.36□□□□□ -0.27
BRCC3-206ENST00000399042 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
BRCC3-206ENST00000399042 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
BRCC3-206ENST00000399042 C9orf84Q5VXU9 1444 aa13.36□□□□□ -0.27
BRCC3-206ENST00000399042 KDM6BO15054 1643 aa13.34□□□□□ -0.27
BRCC3-206ENST00000399042 ARID4BQ4LE39 1312 aaPredicted RBP13.33□□□□□ -0.28
BRCC3-206ENST00000399042 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
BRCC3-206ENST00000399042 COL17A1Q9UMD9 1497 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-206ENST00000399042 DNMT1P26358 1616 aaKnown RBP13.31□□□□□ -0.28
BRCC3-206ENST00000399042 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
BRCC3-206ENST00000399042 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
BRCC3-206ENST00000399042 PTPRKQ15262 1439 aa13.3□□□□□ -0.28
BRCC3-206ENST00000399042 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
BRCC3-206ENST00000399042 ROCK1Q13464 1354 aa13.28□□□□□ -0.28
BRCC3-206ENST00000399042 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
BRCC3-206ENST00000399042 MLH3Q9UHC1 1453 aa13.28□□□□□ -0.28
BRCC3-206ENST00000399042 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
BRCC3-206ENST00000399042 ZBTB22O15209 634 aa13.27□□□□□ -0.29
BRCC3-206ENST00000399042 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
BRCC3-206ENST00000399042 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
BRCC3-206ENST00000399042 NCOA1Q15788 1441 aa13.27□□□□□ -0.29
BRCC3-206ENST00000399042 ZFYVE16Q7Z3T8 1539 aa13.27□□□□□ -0.29
BRCC3-206ENST00000399042 KIF3BO15066 747 aa13.26□□□□□ -0.29
BRCC3-206ENST00000399042 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
BRCC3-206ENST00000399042 HECW2Q9P2P5 1572 aa13.26□□□□□ -0.29
BRCC3-206ENST00000399042 YEATS2Q9ULM3 1422 aa13.26□□□□□ -0.29
BRCC3-206ENST00000399042 KDM5CP41229 1560 aa13.25□□□□□ -0.29
BRCC3-206ENST00000399042 MLECQ14165 292 aa13.25□□□□□ -0.29
BRCC3-206ENST00000399042 ESF1Q9H501 851 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms