RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 FANCAO15360 1455 aa16.48■□□□□ 0.23
CYCSP55-201ENST00000399027 ARHGAP5Q13017 1502 aa16.45■□□□□ 0.22
CYCSP55-201ENST00000399027 GPATCH8Q9UKJ3 1502 aaKnown RBP16.45■□□□□ 0.22
CYCSP55-201ENST00000399027 NCOA2Q15596 1464 aa16.44■□□□□ 0.22
CYCSP55-201ENST00000399027 COL17A1Q9UMD9 1497 aaPredicted RBP16.44■□□□□ 0.22
CYCSP55-201ENST00000399027 RICTORQ6R327 1708 aa16.44■□□□□ 0.22
CYCSP55-201ENST00000399027 AKNAQ7Z591 1439 aa16.43■□□□□ 0.22
CYCSP55-201ENST00000399027 APLP2Q06481 763 aa16.42■□□□□ 0.22
CYCSP55-201ENST00000399027 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
CYCSP55-201ENST00000399027 FRMPD1Q5SYB0 1578 aa16.42■□□□□ 0.22
CYCSP55-201ENST00000399027 SAMD9LQ8IVG5 1584 aa16.4■□□□□ 0.22
CYCSP55-201ENST00000399027 ABCC1P33527 1531 aa16.4■□□□□ 0.22
CYCSP55-201ENST00000399027 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
CYCSP55-201ENST00000399027 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
CYCSP55-201ENST00000399027 EFCAB2Q5VUJ9 269 aa16.38■□□□□ 0.21
CYCSP55-201ENST00000399027 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
CYCSP55-201ENST00000399027 ZMYM4Q5VZL5 1548 aa16.35■□□□□ 0.21
CYCSP55-201ENST00000399027 KDM5CP41229 1560 aa16.34■□□□□ 0.21
CYCSP55-201ENST00000399027 POGZQ7Z3K3 1410 aa16.33■□□□□ 0.2
CYCSP55-201ENST00000399027 SCAPERQ9BY12 1400 aa16.33■□□□□ 0.2
CYCSP55-201ENST00000399027 PLEKHH2Q8IVE3 1493 aa16.33■□□□□ 0.2
CYCSP55-201ENST00000399027 ARHGEF12Q9NZN5 1544 aa16.33■□□□□ 0.2
CYCSP55-201ENST00000399027 MYOM3Q5VTT5 1437 aa16.32■□□□□ 0.2
CYCSP55-201ENST00000399027 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
CYCSP55-201ENST00000399027 MIA2Q96PC5 1412 aa16.31■□□□□ 0.2
CYCSP55-201ENST00000399027 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
CYCSP55-201ENST00000399027 CFDP1Q9UEE9 299 aaPredicted RBP16.31■□□□□ 0.2
CYCSP55-201ENST00000399027 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
CYCSP55-201ENST00000399027 CAMSAP2Q08AD1 1489 aa16.29■□□□□ 0.2
CYCSP55-201ENST00000399027 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
CYCSP55-201ENST00000399027 RAPGEF3O95398 923 aa16.28■□□□□ 0.2
CYCSP55-201ENST00000399027 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
CYCSP55-201ENST00000399027 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
CYCSP55-201ENST00000399027 ARHGEF5Q12774 1597 aa16.27■□□□□ 0.2
CYCSP55-201ENST00000399027 ARHGEF40Q8TER5 1519 aa16.27■□□□□ 0.2
CYCSP55-201ENST00000399027 MBD5Q9P267 1494 aa16.26■□□□□ 0.19
CYCSP55-201ENST00000399027 TRAPPC8Q9Y2L5 1435 aa16.26■□□□□ 0.19
CYCSP55-201ENST00000399027 KIDINS220Q9ULH0 1771 aa16.26■□□□□ 0.19
CYCSP55-201ENST00000399027 SENP3Q9H4L4 574 aaPredicted RBP16.25■□□□□ 0.19
CYCSP55-201ENST00000399027 ZNF777Q9ULD5 760 aaPredicted RBP16.25■□□□□ 0.19
CYCSP55-201ENST00000399027 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
CYCSP55-201ENST00000399027 TCOF1Q13428 1488 aaKnown RBP16.24■□□□□ 0.19
CYCSP55-201ENST00000399027 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
CYCSP55-201ENST00000399027 INO80Q9ULG1 1556 aaPredicted RBP16.24■□□□□ 0.19
CYCSP55-201ENST00000399027 CROCC2H7BZ55 1655 aa16.24■□□□□ 0.19
CYCSP55-201ENST00000399027 MLH3Q9UHC1 1453 aa16.23■□□□□ 0.19
CYCSP55-201ENST00000399027 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
CYCSP55-201ENST00000399027 ABCA6Q8N139 1617 aa16.22■□□□□ 0.19
CYCSP55-201ENST00000399027 AFAP1Q8N556 730 aa16.21■□□□□ 0.19
CYCSP55-201ENST00000399027 CCDC141Q6ZP82 1450 aa16.21■□□□□ 0.19
CYCSP55-201ENST00000399027 DIP2CQ9Y2E4 1556 aa16.21■□□□□ 0.18
CYCSP55-201ENST00000399027 DNMT1P26358 1616 aaKnown RBP16.2■□□□□ 0.18
CYCSP55-201ENST00000399027 SIGLEC1Q9BZZ2 1709 aa16.2■□□□□ 0.18
CYCSP55-201ENST00000399027 HNRNPMP52272 730 aaKnown RBP eCLIP16.2■□□□□ 0.18
CYCSP55-201ENST00000399027 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
CYCSP55-201ENST00000399027 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
CYCSP55-201ENST00000399027 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
CYCSP55-201ENST00000399027 MAST1Q9Y2H9 1570 aa16.19■□□□□ 0.18
CYCSP55-201ENST00000399027 ADGBQ8N7X0 1667 aa16.18■□□□□ 0.18
CYCSP55-201ENST00000399027 RSPH4AQ5TD94 716 aa16.18■□□□□ 0.18
CYCSP55-201ENST00000399027 RTEL1-TNFRSF6BF6WH68 1400 aa16.16■□□□□ 0.18
CYCSP55-201ENST00000399027 ATP10AO60312 1499 aa16.15■□□□□ 0.18
CYCSP55-201ENST00000399027 C9orf84Q5VXU9 1444 aa16.14■□□□□ 0.17
CYCSP55-201ENST00000399027 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
CYCSP55-201ENST00000399027 SHANK2Q9UPX8 1470 aa16.14■□□□□ 0.17
CYCSP55-201ENST00000399027 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
CYCSP55-201ENST00000399027 BCORL1Q5H9F3 1711 aa16.13■□□□□ 0.17
CYCSP55-201ENST00000399027 SPAG9O60271 1321 aaKnown RBP16.13■□□□□ 0.17
CYCSP55-201ENST00000399027 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
CYCSP55-201ENST00000399027 ABCC5O15440 1437 aa16.11■□□□□ 0.17
CYCSP55-201ENST00000399027 DAPK1P53355 1430 aa16.11■□□□□ 0.17
CYCSP55-201ENST00000399027 RRBP1Q9P2E9 1410 aaKnown RBP16.11■□□□□ 0.17
CYCSP55-201ENST00000399027 AGLP35573 1532 aa16.1■□□□□ 0.17
CYCSP55-201ENST00000399027 ADAMTSL3P82987 1691 aa16.09■□□□□ 0.17
CYCSP55-201ENST00000399027 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
CYCSP55-201ENST00000399027 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
CYCSP55-201ENST00000399027 MYT1LQ9UL68 1186 aa16.07■□□□□ 0.16
CYCSP55-201ENST00000399027 A2MP01023 1474 aa16.06■□□□□ 0.16
CYCSP55-201ENST00000399027 ADGRL2O95490 1459 aa16.05■□□□□ 0.16
CYCSP55-201ENST00000399027 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
CYCSP55-201ENST00000399027 EIF2AK4Q9P2K8 1649 aaKnown RBP16.05■□□□□ 0.16
CYCSP55-201ENST00000399027 FER1L4A9Z1Z3 1794 aa16.04■□□□□ 0.16
CYCSP55-201ENST00000399027 FAM50AQ14320 339 aaKnown RBP16.03■□□□□ 0.16
CYCSP55-201ENST00000399027 MADDQ8WXG6 1647 aa16.02■□□□□ 0.16
CYCSP55-201ENST00000399027 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.15
CYCSP55-201ENST00000399027 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
CYCSP55-201ENST00000399027 PTPRKQ15262 1439 aa16.01■□□□□ 0.15
CYCSP55-201ENST00000399027 KDM4FA0A1W2PPD8 638 aa16■□□□□ 0.15
CYCSP55-201ENST00000399027 RNF17Q9BXT8 1623 aaKnown RBP15.99■□□□□ 0.15
CYCSP55-201ENST00000399027 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
CYCSP55-201ENST00000399027 RIMS1Q86UR5 1692 aaKnown RBP15.99■□□□□ 0.15
CYCSP55-201ENST00000399027 ARID4BQ4LE39 1312 aaPredicted RBP15.98■□□□□ 0.15
CYCSP55-201ENST00000399027 ANKRD30AQ9BXX3 1397 aa15.98■□□□□ 0.15
CYCSP55-201ENST00000399027 MROH2AA6NES4 1674 aa15.97■□□□□ 0.15
CYCSP55-201ENST00000399027 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
CYCSP55-201ENST00000399027 KIF15Q9NS87 1388 aa15.97■□□□□ 0.15
CYCSP55-201ENST00000399027 DEPDC5O75140 1603 aa15.97■□□□□ 0.15
CYCSP55-201ENST00000399027 ERBINQ96RT1 1412 aa15.96■□□□□ 0.15
CYCSP55-201ENST00000399027 GCC2Q8IWJ2 1684 aa15.95■□□□□ 0.14
CYCSP55-201ENST00000399027 FAM135AQ9P2D6 1515 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms