RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ANP32EQ9BTT0 268 aa18.95■□□□□ 0.62
TOP3B-202ENST00000398793 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
TOP3B-202ENST00000398793 DHX57Q6P158 1386 aaKnown RBP18.92■□□□□ 0.62
TOP3B-202ENST00000398793 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
TOP3B-202ENST00000398793 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
TOP3B-202ENST00000398793 KIF14Q15058 1648 aa18.89■□□□□ 0.61
TOP3B-202ENST00000398793 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
TOP3B-202ENST00000398793 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
TOP3B-202ENST00000398793 FAM69CQ0P6D2 419 aa18.85■□□□□ 0.61
TOP3B-202ENST00000398793 POLR3GLQ9BT43 218 aa18.84■□□□□ 0.61
TOP3B-202ENST00000398793 KDM2AQ9Y2K7 1162 aa18.84■□□□□ 0.61
TOP3B-202ENST00000398793 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
TOP3B-202ENST00000398793 RGL3Q3MIN7 710 aa18.83■□□□□ 0.61
TOP3B-202ENST00000398793 CFAP43Q8NDM7 1665 aa18.82■□□□□ 0.6
TOP3B-202ENST00000398793 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
TOP3B-202ENST00000398793 MLECQ14165 292 aa18.81■□□□□ 0.6
TOP3B-202ENST00000398793 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
TOP3B-202ENST00000398793 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
TOP3B-202ENST00000398793 MPHOSPH9Q99550 1183 aa18.79■□□□□ 0.6
TOP3B-202ENST00000398793 PTPN23Q9H3S7 1636 aa18.77■□□□□ 0.6
TOP3B-202ENST00000398793 PKD2Q13563 968 aa18.77■□□□□ 0.6
TOP3B-202ENST00000398793 GGT6Q6P531 493 aa18.77■□□□□ 0.6
TOP3B-202ENST00000398793 ARHGAP5Q13017 1502 aa18.76■□□□□ 0.59
TOP3B-202ENST00000398793 ABCC5O15440 1437 aa18.76■□□□□ 0.59
TOP3B-202ENST00000398793 MAP3K1Q13233 1512 aa18.75■□□□□ 0.59
TOP3B-202ENST00000398793 ABCA8O94911 1581 aa18.74■□□□□ 0.59
TOP3B-202ENST00000398793 NAIPQ13075 1403 aa18.73■□□□□ 0.59
TOP3B-202ENST00000398793 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
TOP3B-202ENST00000398793 CLASP1Q7Z460 1538 aa18.72■□□□□ 0.59
TOP3B-202ENST00000398793 ASXL2Q76L83 1435 aa18.72■□□□□ 0.59
TOP3B-202ENST00000398793 DAPK1P53355 1430 aa18.72■□□□□ 0.59
TOP3B-202ENST00000398793 NUP155O75694 1391 aa18.72■□□□□ 0.59
TOP3B-202ENST00000398793 KIF3BO15066 747 aa18.71■□□□□ 0.59
TOP3B-202ENST00000398793 CHGAP10645 457 aaKnown RBP18.71■□□□□ 0.59
TOP3B-202ENST00000398793 SPAG9O60271 1321 aaKnown RBP18.69■□□□□ 0.58
TOP3B-202ENST00000398793 ABCC2Q92887 1545 aa18.68■□□□□ 0.58
TOP3B-202ENST00000398793 TONSLQ96HA7 1378 aa18.68■□□□□ 0.58
TOP3B-202ENST00000398793 KDM6BO15054 1643 aa18.67■□□□□ 0.58
TOP3B-202ENST00000398793 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
TOP3B-202ENST00000398793 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
TOP3B-202ENST00000398793 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
TOP3B-202ENST00000398793 NUTM2DQ5VT03 806 aaPredicted RBP18.65■□□□□ 0.58
TOP3B-202ENST00000398793 ANKRD30AQ9BXX3 1397 aa18.63■□□□□ 0.57
TOP3B-202ENST00000398793 TRAPPC8Q9Y2L5 1435 aa18.63■□□□□ 0.57
TOP3B-202ENST00000398793 C9orf84Q5VXU9 1444 aa18.62■□□□□ 0.57
TOP3B-202ENST00000398793 TTC37Q6PGP7 1564 aa18.62■□□□□ 0.57
TOP3B-202ENST00000398793 L3MBTL2Q969R5 705 aa18.62■□□□□ 0.57
TOP3B-202ENST00000398793 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
TOP3B-202ENST00000398793 HFM1A2PYH4 1435 aa18.6■□□□□ 0.57
TOP3B-202ENST00000398793 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
TOP3B-202ENST00000398793 SYCP2Q9BX26 1530 aa18.6■□□□□ 0.57
TOP3B-202ENST00000398793 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.6■□□□□ 0.575e-7■□□□□ 8.9
TOP3B-202ENST00000398793 DDX10Q13206 875 aaKnown RBP18.6■□□□□ 0.57
TOP3B-202ENST00000398793 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
TOP3B-202ENST00000398793 TSHZ2Q9NRE2 1034 aa18.59■□□□□ 0.57
TOP3B-202ENST00000398793 ANKRD50Q9ULJ7 1429 aa18.58■□□□□ 0.57
TOP3B-202ENST00000398793 ZCCHC11Q5TAX3 1644 aaKnown RBP18.58■□□□□ 0.56
TOP3B-202ENST00000398793 NCOA1Q15788 1441 aa18.58■□□□□ 0.56
TOP3B-202ENST00000398793 CD109Q6YHK3 1445 aa18.58■□□□□ 0.56
TOP3B-202ENST00000398793 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
TOP3B-202ENST00000398793 SHROOM2Q13796 1616 aa18.57■□□□□ 0.56
TOP3B-202ENST00000398793 ABCC10Q5T3U5 1492 aa18.57■□□□□ 0.56
TOP3B-202ENST00000398793 WDR7Q9Y4E6 1490 aa18.55■□□□□ 0.56
TOP3B-202ENST00000398793 DCAF11Q8TEB1 546 aa18.55■□□□□ 0.56
TOP3B-202ENST00000398793 SENP3-EIF4A1A0A087X0R7 540 aa18.55■□□□□ 0.56
TOP3B-202ENST00000398793 ARHGEF12Q9NZN5 1544 aa18.54■□□□□ 0.56
TOP3B-202ENST00000398793 FANCAO15360 1455 aa18.53■□□□□ 0.56
TOP3B-202ENST00000398793 MIER1Q8N108 512 aa18.53■□□□□ 0.56
TOP3B-202ENST00000398793 MAPKBP1O60336 1514 aa18.53■□□□□ 0.56
TOP3B-202ENST00000398793 PLEKHH2Q8IVE3 1493 aa18.52■□□□□ 0.56
TOP3B-202ENST00000398793 KDM5BQ9UGL1 1544 aa18.52■□□□□ 0.55
TOP3B-202ENST00000398793 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
TOP3B-202ENST00000398793 PLCH2O75038 1416 aa18.5■□□□□ 0.55
TOP3B-202ENST00000398793 PPP1R15AO75807 674 aaPredicted RBP18.49■□□□□ 0.55
TOP3B-202ENST00000398793 AKNAQ7Z591 1439 aa18.49■□□□□ 0.55
TOP3B-202ENST00000398793 CDC42BPAQ5VT25 1732 aa18.48■□□□□ 0.55
TOP3B-202ENST00000398793 ADGRL1O94910 1474 aa18.48■□□□□ 0.55
TOP3B-202ENST00000398793 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
TOP3B-202ENST00000398793 NBPF8Q3BBV2 869 aa18.46■□□□□ 0.55
TOP3B-202ENST00000398793 SAMD9LQ8IVG5 1584 aa18.46■□□□□ 0.55
TOP3B-202ENST00000398793 TSPOAP1O95153 1857 aa18.45■□□□□ 0.54
TOP3B-202ENST00000398793 MBD5Q9P267 1494 aa18.45■□□□□ 0.54
TOP3B-202ENST00000398793 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
TOP3B-202ENST00000398793 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
TOP3B-202ENST00000398793 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
TOP3B-202ENST00000398793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
TOP3B-202ENST00000398793 CCDC141Q6ZP82 1450 aa18.44■□□□□ 0.54
TOP3B-202ENST00000398793 WASHC2CQ9Y4E1 1318 aa18.41■□□□□ 0.54
TOP3B-202ENST00000398793 CDC42BPBQ9Y5S2 1711 aa18.41■□□□□ 0.54
TOP3B-202ENST00000398793 CFAP65Q6ZU64 1925 aaKnown RBP18.38■□□□□ 0.53
TOP3B-202ENST00000398793 RSPH4AQ5TD94 716 aa18.38■□□□□ 0.53
TOP3B-202ENST00000398793 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
TOP3B-202ENST00000398793 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
TOP3B-202ENST00000398793 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
TOP3B-202ENST00000398793 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-202ENST00000398793 DENND4BO75064 1496 aaPredicted RBP18.36■□□□□ 0.53
TOP3B-202ENST00000398793 SAFB2Q14151 953 aaKnown RBP eCLIP18.34■□□□□ 0.53
TOP3B-202ENST00000398793 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
TOP3B-202ENST00000398793 ITSN2Q9NZM3 1697 aa18.34■□□□□ 0.53
TOP3B-202ENST00000398793 CLSPNQ9HAW4 1339 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms