RNA–Protein interactions for RNA: ENST00000398548.5

PRDM15-202, Transcript of PR/SET domain 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM15, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-202ENST00000398548 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
PRDM15-202ENST00000398548 CECR2Q9BXF3 1484 aa13.36□□□□□ -0.27
PRDM15-202ENST00000398548 MLECQ14165 292 aa13.36□□□□□ -0.27
PRDM15-202ENST00000398548 PKD2Q13563 968 aa13.35□□□□□ -0.27
PRDM15-202ENST00000398548 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
PRDM15-202ENST00000398548 NRDCO43847 1150 aa13.34□□□□□ -0.27
PRDM15-202ENST00000398548 FOXD1Q16676 465 aa13.34□□□□□ -0.27
PRDM15-202ENST00000398548 MCCP23508 829 aa13.33□□□□□ -0.28
PRDM15-202ENST00000398548 GOLGA6L4A6NEF3 574 aa13.33□□□□□ -0.28
PRDM15-202ENST00000398548 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
PRDM15-202ENST00000398548 RTF1Q92541 710 aaKnown RBP13.32□□□□□ -0.28
PRDM15-202ENST00000398548 CLSTN1O94985 981 aa13.32□□□□□ -0.28
PRDM15-202ENST00000398548 STK26Q9P289 416 aa13.32□□□□□ -0.28
PRDM15-202ENST00000398548 SPRYD3Q8NCJ5 442 aa13.32□□□□□ -0.28
PRDM15-202ENST00000398548 GGT6Q6P531 493 aa13.31□□□□□ -0.28
PRDM15-202ENST00000398548 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
PRDM15-202ENST00000398548 HDGFL2Q7Z4V5 671 aaPredicted RBP13.3□□□□□ -0.28
PRDM15-202ENST00000398548 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
PRDM15-202ENST00000398548 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
PRDM15-202ENST00000398548 ROCK2O75116 1388 aaKnown RBP13.29□□□□□ -0.28
PRDM15-202ENST00000398548 IPO8O15397 1037 aaKnown RBP13.29□□□□□ -0.28
PRDM15-202ENST00000398548 ISY1Q9ULR0 285 aaKnown RBP13.28□□□□□ -0.28
PRDM15-202ENST00000398548 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
PRDM15-202ENST00000398548 RBM19Q9Y4C8 960 aaKnown RBP13.28□□□□□ -0.28
PRDM15-202ENST00000398548 L1TD1Q5T7N2 865 aaKnown RBP13.27□□□□□ -0.28
PRDM15-202ENST00000398548 RCAN3Q9UKA8 241 aa13.27□□□□□ -0.28
PRDM15-202ENST00000398548 ABCC8Q09428 1581 aa13.27□□□□□ -0.29
PRDM15-202ENST00000398548 RAB3GAP2Q9H2M9 1393 aa13.27□□□□□ -0.29
PRDM15-202ENST00000398548 RALBP1Q15311 655 aa13.27□□□□□ -0.29
PRDM15-202ENST00000398548 APBB1O00213 710 aa13.26□□□□□ -0.29
PRDM15-202ENST00000398548 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
PRDM15-202ENST00000398548 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
PRDM15-202ENST00000398548 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRDM15-202ENST00000398548 CARMIL2Q6F5E8 1435 aa13.26□□□□□ -0.29
PRDM15-202ENST00000398548 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
PRDM15-202ENST00000398548 NUP155O75694 1391 aa13.25□□□□□ -0.29
PRDM15-202ENST00000398548 MSNP26038 577 aaKnown RBP13.25□□□□□ -0.29
PRDM15-202ENST00000398548 CALD1Q05682 793 aaKnown RBP13.25□□□□□ -0.29
PRDM15-202ENST00000398548 CHAF1AQ13111 956 aaPredicted RBP13.24□□□□□ -0.29
PRDM15-202ENST00000398548 ITPRIPQ8IWB1 547 aa13.24□□□□□ -0.29
PRDM15-202ENST00000398548 GNL2Q13823 731 aaKnown RBP13.23□□□□□ -0.29
PRDM15-202ENST00000398548 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
PRDM15-202ENST00000398548 DEKP35659 375 aaKnown RBP13.23□□□□□ -0.29
PRDM15-202ENST00000398548 RWDD1Q9H446 243 aaPredicted RBP13.23□□□□□ -0.29
PRDM15-202ENST00000398548 DRC7Q8IY82 874 aa13.23□□□□□ -0.29
PRDM15-202ENST00000398548 FMN1Q68DA7 1419 aa13.22□□□□□ -0.29
PRDM15-202ENST00000398548 ANKRD30AQ9BXX3 1397 aa13.22□□□□□ -0.29
PRDM15-202ENST00000398548 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
PRDM15-202ENST00000398548 EFCAB2Q5VUJ9 269 aa13.2□□□□□ -0.3
PRDM15-202ENST00000398548 TCERG1O14776 1098 aaKnown RBP13.2□□□□□ -0.3
PRDM15-202ENST00000398548 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
PRDM15-202ENST00000398548 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
PRDM15-202ENST00000398548 GBP4Q96PP9 640 aa13.19□□□□□ -0.3
PRDM15-202ENST00000398548 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
PRDM15-202ENST00000398548 PMFBP1Q8TBY8 1022 aa13.18□□□□□ -0.3
PRDM15-202ENST00000398548 KIAA2012Q0VF49 1180 aa13.18□□□□□ -0.3
PRDM15-202ENST00000398548 PTMSP20962 102 aa13.17□□□□□ -0.3
PRDM15-202ENST00000398548 TDRD9Q8NDG6 1382 aaKnown RBP13.17□□□□□ -0.3
PRDM15-202ENST00000398548 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
PRDM15-202ENST00000398548 PDS5BQ9NTI5 1447 aa13.16□□□□□ -0.3
PRDM15-202ENST00000398548 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
PRDM15-202ENST00000398548 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
PRDM15-202ENST00000398548 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
PRDM15-202ENST00000398548 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
PRDM15-202ENST00000398548 SPAG9O60271 1321 aaKnown RBP13.15□□□□□ -0.3
PRDM15-202ENST00000398548 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
PRDM15-202ENST00000398548 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
PRDM15-202ENST00000398548 KIF3BO15066 747 aa13.15□□□□□ -0.31
PRDM15-202ENST00000398548 HNRNPMP52272 730 aaKnown RBP eCLIP13.15□□□□□ -0.313e-8■■■■■ 32
PRDM15-202ENST00000398548 GZF1Q9H116 711 aaPredicted RBP13.14□□□□□ -0.31
PRDM15-202ENST00000398548 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
PRDM15-202ENST00000398548 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
PRDM15-202ENST00000398548 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
PRDM15-202ENST00000398548 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
PRDM15-202ENST00000398548 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
PRDM15-202ENST00000398548 HTATSF1O43719 755 aaKnown RBP13.11□□□□□ -0.31
PRDM15-202ENST00000398548 GPATCH3Q96I76 525 aa13.11□□□□□ -0.31
PRDM15-202ENST00000398548 TRIM6-TRIM34B2RNG4 842 aa13.11□□□□□ -0.31
PRDM15-202ENST00000398548 HMMRO75330 724 aa13.1□□□□□ -0.31
PRDM15-202ENST00000398548 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
PRDM15-202ENST00000398548 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-202ENST00000398548 SYAP1Q96A49 352 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-202ENST00000398548 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
PRDM15-202ENST00000398548 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
PRDM15-202ENST00000398548 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
PRDM15-202ENST00000398548 GORABQ5T7V8 394 aa13.09□□□□□ -0.31
PRDM15-202ENST00000398548 FHOD3Q2V2M9 1422 aa13.09□□□□□ -0.31
PRDM15-202ENST00000398548 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
PRDM15-202ENST00000398548 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
PRDM15-202ENST00000398548 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
PRDM15-202ENST00000398548 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.31
PRDM15-202ENST00000398548 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 RAPGEF2Q9Y4G8 1499 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 G3V3G9 751 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 HDAC5Q9UQL6 1122 aa13.08□□□□□ -0.32
PRDM15-202ENST00000398548 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
PRDM15-202ENST00000398548 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
PRDM15-202ENST00000398548 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms