RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
CD47-203ENST00000398258 RIMBP2O15034 1052 aa9.4□□□□□ -0.9
CD47-203ENST00000398258 SPOCK2Q92563 424 aa9.39□□□□□ -0.91
CD47-203ENST00000398258 KHSRPQ92945 711 aaKnown RBP eCLIP9.38□□□□□ -0.915e-8■■□□□ 13.6
CD47-203ENST00000398258 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
CD47-203ENST00000398258 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
CD47-203ENST00000398258 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
CD47-203ENST00000398258 Q6ZNB5 142 aa9.32□□□□□ -0.92
CD47-203ENST00000398258 RNF25Q96BH1 459 aaPredicted RBP9.32□□□□□ -0.92
CD47-203ENST00000398258 PHF8Q9UPP1 1060 aa9.31□□□□□ -0.92
CD47-203ENST00000398258 LCE2BO14633 110 aa9.29□□□□□ -0.92
CD47-203ENST00000398258 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
CD47-203ENST00000398258 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
CD47-203ENST00000398258 IFFO2Q5TF58 517 aa9.25□□□□□ -0.93
CD47-203ENST00000398258 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
CD47-203ENST00000398258 SOX12O15370 315 aa9.24□□□□□ -0.93
CD47-203ENST00000398258 A0A0G2JS52 829 aa9.22□□□□□ -0.93
CD47-203ENST00000398258 AXIN2Q9Y2T1 843 aa9.21□□□□□ -0.94
CD47-203ENST00000398258 PBX2P40425 430 aa9.2□□□□□ -0.94
CD47-203ENST00000398258 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
CD47-203ENST00000398258 LOC100996750A0A140TA64 210 aa9.19□□□□□ -0.94
CD47-203ENST00000398258 RIOK3O14730 519 aaKnown RBP9.19□□□□□ -0.94
CD47-203ENST00000398258 KIF3CO14782 793 aa9.19□□□□□ -0.94
CD47-203ENST00000398258 KRTAP4-6Q9BYQ5 205 aa9.19□□□□□ -0.94
CD47-203ENST00000398258 NUDT7P0C024 238 aa9.18□□□□□ -0.94
CD47-203ENST00000398258 TRIM41Q8WV44 630 aa9.17□□□□□ -0.94
CD47-203ENST00000398258 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
CD47-203ENST00000398258 LHX6Q9UPM6 363 aa9.16□□□□□ -0.94
CD47-203ENST00000398258 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
CD47-203ENST00000398258 VGFO15240 615 aaPredicted RBP9.12□□□□□ -0.95
CD47-203ENST00000398258 MFRPQ9BY79 579 aa9.12□□□□□ -0.95
CD47-203ENST00000398258 KCTD12Q96CX2 325 aaKnown RBP9.11□□□□□ -0.95
CD47-203ENST00000398258 HRO43593 1189 aa9.1□□□□□ -0.95
CD47-203ENST00000398258 PCDHGA4Q9Y5G9 962 aa9.1□□□□□ -0.95
CD47-203ENST00000398258 NLRP6P59044 892 aa9.09□□□□□ -0.95
CD47-203ENST00000398258 TRAF7Q6Q0C0 670 aa9.08□□□□□ -0.96
CD47-203ENST00000398258 BCL11BQ9C0K0 894 aaPredicted RBP9.07□□□□□ -0.96
CD47-203ENST00000398258 KDM4FA0A1W2PPD8 638 aa9.06□□□□□ -0.96
CD47-203ENST00000398258 SLC34A2O95436 690 aa9.05□□□□□ -0.96
CD47-203ENST00000398258 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
CD47-203ENST00000398258 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
CD47-203ENST00000398258 PSEN2P49810 448 aa9.02□□□□□ -0.97
CD47-203ENST00000398258 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
CD47-203ENST00000398258 STK24Q9Y6E0 443 aa9.01□□□□□ -0.97
CD47-203ENST00000398258 TK2O00142 265 aa8.99□□□□□ -0.97
CD47-203ENST00000398258 PTPN5P54829 565 aa8.99□□□□□ -0.97
CD47-203ENST00000398258 PPP1R37O75864 691 aa8.97□□□□□ -0.97
CD47-203ENST00000398258 LAPTM4AQ15012 233 aa8.95□□□□□ -0.98
CD47-203ENST00000398258 ZNF787Q6DD87 383 aa8.93□□□□□ -0.98
CD47-203ENST00000398258 STK25O00506 426 aa8.92□□□□□ -0.98
CD47-203ENST00000398258 TMC2Q8TDI7 906 aa8.92□□□□□ -0.98
CD47-203ENST00000398258 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
CD47-203ENST00000398258 GFRA3O60609 400 aa8.87□□□□□ -0.99
CD47-203ENST00000398258 PSDA5PKW4 1024 aaPredicted RBP8.86□□□□□ -0.99
CD47-203ENST00000398258 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
CD47-203ENST00000398258 RGL2O15211 777 aa8.84□□□□□ -0.99
CD47-203ENST00000398258 PLPP6Q8IY26 295 aa8.84□□□□□ -0.99
CD47-203ENST00000398258 VPS9D1Q9Y2B5 631 aa8.84□□□□□ -0.99
CD47-203ENST00000398258 FOXK1P85037 733 aa8.83□□□□□ -1
CD47-203ENST00000398258 DSG2Q14126 1118 aa8.82□□□□□ -1
CD47-203ENST00000398258 PPP4R3BQ5MIZ7 849 aa8.82□□□□□ -1
CD47-203ENST00000398258 THSD4Q6ZMP0 1018 aa8.81□□□□□ -1
CD47-203ENST00000398258 STAC3Q96MF2 364 aa8.8□□□□□ -1
CD47-203ENST00000398258 BHMG1C9JSJ3 638 aaPredicted RBP8.79□□□□□ -1
CD47-203ENST00000398258 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
CD47-203ENST00000398258 ECM2O94769 699 aaPredicted RBP8.78□□□□□ -1
CD47-203ENST00000398258 PKD2Q13563 968 aa8.78□□□□□ -1
CD47-203ENST00000398258 GPHNQ9NQX3 736 aaPredicted RBP8.78□□□□□ -1
CD47-203ENST00000398258 ITGBL1O95965 494 aaPredicted RBP8.75□□□□□ -1.01
CD47-203ENST00000398258 LCE2AQ5TA79 106 aaPredicted RBP8.74□□□□□ -1.01
CD47-203ENST00000398258 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
CD47-203ENST00000398258 NRG2O14511 850 aaPredicted RBP8.72□□□□□ -1.01
CD47-203ENST00000398258 ZNF454Q8N9F8 522 aa8.72□□□□□ -1.01
CD47-203ENST00000398258 ZBED2Q9BTP6 218 aa8.72□□□□□ -1.01
CD47-203ENST00000398258 SLC4A5Q9BY07 1137 aa8.72□□□□□ -1.01
CD47-203ENST00000398258 BCL2L12Q9HB09 334 aa8.72□□□□□ -1.01
CD47-203ENST00000398258 UPF1Q92900 1129 aaKnown RBP eCLIP8.71□□□□□ -1.02
CD47-203ENST00000398258 FOSBP53539 338 aa8.69□□□□□ -1.02
CD47-203ENST00000398258 WNT2BQ93097 391 aa8.68□□□□□ -1.02
CD47-203ENST00000398258 TBC1D12O60347 775 aa8.67□□□□□ -1.02
CD47-203ENST00000398258 ADAM33Q9BZ11 813 aa8.65□□□□□ -1.02
CD47-203ENST00000398258 KCNH8Q96L42 1107 aa8.64□□□□□ -1.03
CD47-203ENST00000398258 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
CD47-203ENST00000398258 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
CD47-203ENST00000398258 PTPREP23469 700 aa8.62□□□□□ -1.03
CD47-203ENST00000398258 CRISPLD2Q9H0B8 497 aa8.62□□□□□ -1.03
CD47-203ENST00000398258 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
CD47-203ENST00000398258 NKX1-1Q15270 411 aaPredicted RBP8.6□□□□□ -1.03
CD47-203ENST00000398258 NCKAP5LQ9HCH0 1330 aa8.59□□□□□ -1.03
CD47-203ENST00000398258 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
CD47-203ENST00000398258 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
CD47-203ENST00000398258 JPH4Q96JJ6 628 aa8.59□□□□□ -1.03
CD47-203ENST00000398258 STK17AQ9UEE5 414 aa8.59□□□□□ -1.03
CD47-203ENST00000398258 BCAMP50895 628 aa8.58□□□□□ -1.04
CD47-203ENST00000398258 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
CD47-203ENST00000398258 HS6ST3Q8IZP7 471 aa8.58□□□□□ -1.04
CD47-203ENST00000398258 POTECB2RU33 542 aa8.57□□□□□ -1.04
CD47-203ENST00000398258 COL9A1P20849 921 aa8.57□□□□□ -1.04
CD47-203ENST00000398258 ZDHHC16Q969W1 377 aa8.57□□□□□ -1.04
CD47-203ENST00000398258 EVI5O60447 810 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms