RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SCAPERQ9BY12 1400 aa40.62■■■■■ 4.09
U2AF1-203ENST00000398137 POGZQ7Z3K3 1410 aa40.59■■■■■ 4.09
U2AF1-203ENST00000398137 BCORL1Q5H9F3 1711 aa40.59■■■■■ 4.09
U2AF1-203ENST00000398137 YEATS2Q9ULM3 1422 aa40.58■■■■■ 4.09
U2AF1-203ENST00000398137 SIGLEC1Q9BZZ2 1709 aa40.57■■■■■ 4.09
U2AF1-203ENST00000398137 CDC42BPBQ9Y5S2 1711 aa40.56■■■■■ 4.08
U2AF1-203ENST00000398137 EFCAB2Q5VUJ9 269 aa40.56■■■■■ 4.08
U2AF1-203ENST00000398137 ZFYVE16Q7Z3T8 1539 aa40.53■■■■■ 4.08
U2AF1-203ENST00000398137 ARHGAP5Q13017 1502 aa40.52■■■■■ 4.08
U2AF1-203ENST00000398137 MAGI2Q86UL8 1455 aa40.51■■■■■ 4.07
U2AF1-203ENST00000398137 PREX2Q70Z35 1606 aa40.49■■■■■ 4.07
U2AF1-203ENST00000398137 HECW2Q9P2P5 1572 aa40.48■■■■■ 4.07
U2AF1-203ENST00000398137 MADDQ8WXG6 1647 aa40.46■■■■■ 4.07
U2AF1-203ENST00000398137 PTPRMP28827 1452 aa40.45■■■■■ 4.07
U2AF1-203ENST00000398137 ARID4BQ4LE39 1312 aaPredicted RBP40.43■■■■■ 4.06
U2AF1-203ENST00000398137 CDC42BPAQ5VT25 1732 aa40.43■■■■■ 4.06
U2AF1-203ENST00000398137 KDM5CP41229 1560 aa40.4■■■■■ 4.06
U2AF1-203ENST00000398137 ZNF518AQ6AHZ1 1483 aa40.37■■■■■ 4.05
U2AF1-203ENST00000398137 ARHGEF12Q9NZN5 1544 aa40.37■■■■■ 4.05
U2AF1-203ENST00000398137 VPS8Q8N3P4 1428 aa40.35■■■■■ 4.05
U2AF1-203ENST00000398137 AFAP1Q8N556 730 aa40.35■■■■■ 4.05
U2AF1-203ENST00000398137 ABCC1P33527 1531 aa40.35■■■■■ 4.05
U2AF1-203ENST00000398137 ATP10AO60312 1499 aa40.31■■■■■ 4.04
U2AF1-203ENST00000398137 RIMS1Q86UR5 1692 aaKnown RBP40.31■■■■■ 4.04
U2AF1-203ENST00000398137 ITSN2Q9NZM3 1697 aa40.3■■■■■ 4.04
U2AF1-203ENST00000398137 TRAPPC8Q9Y2L5 1435 aa40.28■■■■■ 4.04
U2AF1-203ENST00000398137 GPATCH8Q9UKJ3 1502 aaKnown RBP40.27■■■■■ 4.04
U2AF1-203ENST00000398137 C9orf84Q5VXU9 1444 aa40.25■■■■■ 4.03
U2AF1-203ENST00000398137 SAMD9LQ8IVG5 1584 aa40.23■■■■■ 4.03
U2AF1-203ENST00000398137 DIP2CQ9Y2E4 1556 aa40.22■■■■■ 4.03
U2AF1-203ENST00000398137 MLH3Q9UHC1 1453 aa40.2■■■■■ 4.03
U2AF1-203ENST00000398137 ABCA6Q8N139 1617 aa40.19■■■■■ 4.02
U2AF1-203ENST00000398137 MTUS2Q5JR59 1369 aa40.15■■■■■ 4.02
U2AF1-203ENST00000398137 MLECQ14165 292 aa40.15■■■■■ 4.02
U2AF1-203ENST00000398137 FER1L4A9Z1Z3 1794 aa40.15■■■■■ 4.02
U2AF1-203ENST00000398137 KIDINS220Q9ULH0 1771 aa40.12■■■■■ 4.01
U2AF1-203ENST00000398137 REREQ9P2R6 1566 aa40.12■■■■■ 4.01
U2AF1-203ENST00000398137 EHBP1L1Q8N3D4 1523 aa40.11■■■■■ 4.01
U2AF1-203ENST00000398137 SYCP2Q9BX26 1530 aa40.11■■■■■ 4.01
U2AF1-203ENST00000398137 ZNF777Q9ULD5 760 aaPredicted RBP40.09■■■■■ 4.01
U2AF1-203ENST00000398137 TIAM1Q13009 1591 aa40.08■■■■■ 4.01
U2AF1-203ENST00000398137 CCNB3Q8WWL7 1395 aa40.07■■■■■ 4
U2AF1-203ENST00000398137 LMTK3Q96Q04 1460 aa40.05■■■■■ 4
U2AF1-203ENST00000398137 MYT1LQ9UL68 1186 aa40.03■■■■■ 4
U2AF1-203ENST00000398137 HNRNPMP52272 730 aaKnown RBP eCLIP40.02■■■■■ 4
U2AF1-203ENST00000398137 CFDP1Q9UEE9 299 aaPredicted RBP40.02■■■■■ 4
U2AF1-203ENST00000398137 KIAA1107Q9UPP5 1409 aa40.01■■■■■ 4
U2AF1-203ENST00000398137 AGLP35573 1532 aa39.98■■■■□ 3.99
U2AF1-203ENST00000398137 PLPPR3Q6T4P5 718 aa39.96■■■■□ 3.99
U2AF1-203ENST00000398137 PLEKHH2Q8IVE3 1493 aa39.94■■■■□ 3.98
U2AF1-203ENST00000398137 ZNF644Q9H582 1327 aaPredicted RBP39.93■■■■□ 3.98
U2AF1-203ENST00000398137 INO80Q9ULG1 1556 aaPredicted RBP39.91■■■■□ 3.98
U2AF1-203ENST00000398137 NCOA2Q15596 1464 aa39.89■■■■□ 3.98
U2AF1-203ENST00000398137 MAP3K1Q13233 1512 aa39.89■■■■□ 3.98
U2AF1-203ENST00000398137 ATP7AQ04656 1500 aa39.88■■■■□ 3.97
U2AF1-203ENST00000398137 SPAG9O60271 1321 aaKnown RBP39.88■■■■□ 3.97
U2AF1-203ENST00000398137 SUPT6HQ7KZ85 1726 aaKnown RBP39.88■■■■□ 3.97
U2AF1-203ENST00000398137 MBD5Q9P267 1494 aa39.87■■■■□ 3.97
U2AF1-203ENST00000398137 CEBPAP49715 358 aaPredicted RBP39.85■■■■□ 3.97
U2AF1-203ENST00000398137 APLP2Q06481 763 aa39.84■■■■□ 3.97
U2AF1-203ENST00000398137 LRRC9Q6ZRR7 1453 aa39.79■■■■□ 3.96
U2AF1-203ENST00000398137 PLXNC1O60486 1568 aa39.79■■■■□ 3.96
U2AF1-203ENST00000398137 HSPA2P54652 639 aa39.78■■■■□ 3.96
U2AF1-203ENST00000398137 C3P01024 1663 aa39.76■■■■□ 3.96
U2AF1-203ENST00000398137 PREX1Q8TCU6 1659 aa39.73■■■■□ 3.95
U2AF1-203ENST00000398137 KANK4Q5T7N3 995 aaPredicted RBP39.73■■■■□ 3.95
U2AF1-203ENST00000398137 A2MP01023 1474 aa39.71■■■■□ 3.95
U2AF1-203ENST00000398137 CAMSAP2Q08AD1 1489 aa39.71■■■■□ 3.95
U2AF1-203ENST00000398137 ILDR1Q86SU0 546 aaPredicted RBP39.68■■■■□ 3.94
U2AF1-203ENST00000398137 ADGBQ8N7X0 1667 aa39.67■■■■□ 3.94
U2AF1-203ENST00000398137 RTEL1-TNFRSF6BF6WH68 1400 aa39.65■■■■□ 3.94
U2AF1-203ENST00000398137 SETD1BQ9UPS6 1966 aaKnown RBP39.63■■■■□ 3.93
U2AF1-203ENST00000398137 CNTLNQ9NXG0 1405 aa39.61■■■■□ 3.93
U2AF1-203ENST00000398137 CCDC141Q6ZP82 1450 aa39.61■■■■□ 3.93
U2AF1-203ENST00000398137 MROH2AA6NES4 1674 aa39.59■■■■□ 3.93
U2AF1-203ENST00000398137 ARHGEF5Q12774 1597 aa39.56■■■■□ 3.92
U2AF1-203ENST00000398137 ESF1Q9H501 851 aaKnown RBP39.55■■■■□ 3.92
U2AF1-203ENST00000398137 CLTCQ00610 1675 aaKnown RBP39.54■■■■□ 3.92
U2AF1-203ENST00000398137 UHRF1BP1Q6BDS2 1440 aa39.53■■■■□ 3.92
U2AF1-203ENST00000398137 ZMYM3Q14202 1370 aa39.49■■■■□ 3.91
U2AF1-203ENST00000398137 DHX29Q7Z478 1369 aaKnown RBP39.49■■■■□ 3.91
U2AF1-203ENST00000398137 RSPH4AQ5TD94 716 aa39.49■■■■□ 3.91
U2AF1-203ENST00000398137 STRCQ7RTU9 1775 aa39.49■■■■□ 3.91
U2AF1-203ENST00000398137 MYOM3Q5VTT5 1437 aa39.47■■■■□ 3.91
U2AF1-203ENST00000398137 GGT6Q6P531 493 aa39.46■■■■□ 3.91
U2AF1-203ENST00000398137 PPARGC1BQ86YN6 1023 aaKnown RBP39.43■■■■□ 3.9
U2AF1-203ENST00000398137 NPATQ14207 1427 aa39.42■■■■□ 3.9
U2AF1-203ENST00000398137 MIA2Q96PC5 1412 aa39.42■■■■□ 3.9
U2AF1-203ENST00000398137 MAST1Q9Y2H9 1570 aa39.38■■■■□ 3.9
U2AF1-203ENST00000398137 PPP6R1Q9UPN7 881 aa39.36■■■■□ 3.89
U2AF1-203ENST00000398137 PTPRKQ15262 1439 aa39.35■■■■□ 3.89
U2AF1-203ENST00000398137 KIF3BO15066 747 aa39.32■■■■□ 3.89
U2AF1-203ENST00000398137 TSPY4P0CV99 314 aa39.32■■■■□ 3.89
U2AF1-203ENST00000398137 TSPY10P0CW01 314 aa39.32■■■■□ 3.89
U2AF1-203ENST00000398137 MYO3AQ8NEV4 1616 aa39.27■■■■□ 3.88
U2AF1-203ENST00000398137 PTPN23Q9H3S7 1636 aa39.24■■■■□ 3.87
U2AF1-203ENST00000398137 ZNF142P52746 1687 aaPredicted RBP39.23■■■■□ 3.87
U2AF1-203ENST00000398137 FBXO41Q8TF61 875 aa39.23■■■■□ 3.87
U2AF1-203ENST00000398137 KDM5DQ9BY66 1539 aa39.22■■■■□ 3.87
U2AF1-203ENST00000398137 NCOA1Q15788 1441 aa39.22■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms