RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGN2P39-201ENST00000398005 RIOK3O14730 519 aaKnown RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 GSE1Q14687 1217 aa3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 PDCD7Q8N8D1 485 aaKnown RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 RNF25Q96BH1 459 aaPredicted RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 WDR70Q9NW82 654 aa3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 SPNS2Q8IVW8 549 aa3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 MARVELD3Q96A59 401 aa3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 RYDENQ9NUL5 291 aaKnown RBP3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 MMRN1Q13201 1228 aa3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 TMEM121BQ9BXQ6 578 aaPredicted RBP3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 SLC24A3Q9HC58 644 aa3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 KCNV2Q8TDN2 545 aa3.67□□□□□ -1.82
HMGN2P39-201ENST00000398005 ZC3H15Q8WU90 426 aaKnown RBP3.67□□□□□ -1.82
HMGN2P39-201ENST00000398005 POTEB3A0JP26 581 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 SNPHO15079 494 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 VGFO15240 615 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 CHRM1P11229 460 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 POTEBQ6S5H4 581 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 ZNF467Q7Z7K2 595 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 ARID3AQ99856 593 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 STK24Q9Y6E0 443 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 HRCP23327 699 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 MKRN3Q13064 507 aaKnown RBP3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 ILDR1Q86SU0 546 aaPredicted RBP3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 KRTAP3-2Q9BYR7 98 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZMYND15Q9H091 742 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 RSPH6AQ9H0K4 717 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 PSEN1P49768 467 aa3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 DPY19L2Q6NUT2 758 aa3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 L3MBTL3Q96JM7 780 aaPredicted RBP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 BCL11BQ9C0K0 894 aaPredicted RBP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 EMP3P54852 163 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 GOLGA2Q08379 1002 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 C3orf67Q6ZVT6 689 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 HS3ST6Q96QI5 342 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 FAM205CA6NFA0 338 aa3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZFP91Q96JP5 570 aaPredicted RBP3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZBTB7CA1YPR0 619 aa3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 HOXB3P14651 431 aaPredicted RBP3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 CADPS2Q86UW7 1296 aa3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 PDIA4P13667 645 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 PDAP1Q13442 181 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 IL27Q8NEV9 243 aa3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 ARHGEF1Q92888 912 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 CABP2Q9NPB3 220 aa3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 CCDC9Q9Y3X0 531 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 SEMA3EO15041 775 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZMYND10O75800 440 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 SMYD5Q6GMV2 418 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 BOLA1Q9Y3E2 137 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 TESPA1A2RU30 521 aaPredicted RBP3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 ARID3CA6NKF2 412 aa3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 E2F4Q16254 413 aa3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 GPBP1L1Q9HC44 474 aaPredicted RBP3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 APBB1O00213 710 aa3.57□□□□□ -1.84
HMGN2P39-201ENST00000398005 HOXB1P14653 301 aaPredicted RBP3.57□□□□□ -1.84
HMGN2P39-201ENST00000398005 TMEM92Q6UXU6 159 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 EFCAB3Q8N7B9 438 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 KRI1Q8N9T8 703 aaKnown RBP3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 AK7Q96M32 723 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 C1orf115Q9H7X2 142 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 G3V3G9 751 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 BARGINQ6ZT62 677 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 KDM4CQ9H3R0 1056 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 ERBB3P21860 1342 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 DOK7Q18PE1 504 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 ZNF710Q8N1W2 664 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 VARS2Q5ST30 1063 aaKnown RBP3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 GPR153Q6NV75 609 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 MICALL2Q8IY33 904 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 MS4A4AQ96JQ5 239 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 PDE4DQ08499 809 aa3.52□□□□□ -1.85
HMGN2P39-201ENST00000398005 GPIHBP1Q8IV16 184 aa3.52□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZNF316A6NFI3 1004 aaPredicted RBP3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 FLIIQ13045 1269 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZNF687Q8N1G0 1237 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 NECTIN2Q92692 538 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 RNF166Q96A37 237 aaPredicted RBP3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 TRIM66O15016 1216 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 RIMBP2O15034 1052 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 SOX12O15370 315 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 RBM26Q5T8P6 1007 aaKnown RBP3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 CCDC82Q8N4S0 544 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 KCTD17Q8N5Z5 321 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZSWIM6Q9HCJ5 1215 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 PHF8Q9UPP1 1060 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 ARSIQ5FYB1 569 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 KHSRPQ92945 711 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 MFRPQ9BY79 579 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 MYT1LQ9UL68 1186 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 PPP1R37O75864 691 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 AEBP1Q8IUX7 1158 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 LARP6Q9BRS8 491 aaKnown RBP3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 FAM117AQ9C073 453 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 RAD21O60216 631 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms