RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.71□□□□□ -1.82
HMGN2P39-201ENST00000398005 RIOK3O14730 519 aaKnown RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 GSE1Q14687 1217 aa3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 PDCD7Q8N8D1 485 aaKnown RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 RNF25Q96BH1 459 aaPredicted RBP3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 WDR70Q9NW82 654 aa3.7□□□□□ -1.82
HMGN2P39-201ENST00000398005 SPNS2Q8IVW8 549 aa3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 MARVELD3Q96A59 401 aa3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 RYDENQ9NUL5 291 aaKnown RBP3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.69□□□□□ -1.82
HMGN2P39-201ENST00000398005 MMRN1Q13201 1228 aa3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 TMEM121BQ9BXQ6 578 aaPredicted RBP3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 SLC24A3Q9HC58 644 aa3.68□□□□□ -1.82
HMGN2P39-201ENST00000398005 KCNV2Q8TDN2 545 aa3.67□□□□□ -1.82
HMGN2P39-201ENST00000398005 ZC3H15Q8WU90 426 aaKnown RBP3.67□□□□□ -1.82
HMGN2P39-201ENST00000398005 POTEB3A0JP26 581 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 SNPHO15079 494 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 VGFO15240 615 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 CHRM1P11229 460 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 POTEBQ6S5H4 581 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 ZNF467Q7Z7K2 595 aaPredicted RBP3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 ARID3AQ99856 593 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 STK24Q9Y6E0 443 aa3.66□□□□□ -1.82
HMGN2P39-201ENST00000398005 HRCP23327 699 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 MKRN3Q13064 507 aaKnown RBP3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 ILDR1Q86SU0 546 aaPredicted RBP3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 KRTAP3-3Q9BYR6 98 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 KRTAP3-2Q9BYR7 98 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZMYND15Q9H091 742 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 RSPH6AQ9H0K4 717 aa3.65□□□□□ -1.83
HMGN2P39-201ENST00000398005 PSEN1P49768 467 aa3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 DPY19L2Q6NUT2 758 aa3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 L3MBTL3Q96JM7 780 aaPredicted RBP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 BCL11BQ9C0K0 894 aaPredicted RBP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.64□□□□□ -1.83
HMGN2P39-201ENST00000398005 EMP3P54852 163 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 GOLGA2Q08379 1002 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 C3orf67Q6ZVT6 689 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 HS3ST6Q96QI5 342 aa3.63□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 FAM205CA6NFA0 338 aa3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZFP91Q96JP5 570 aaPredicted RBP3.62□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZBTB7CA1YPR0 619 aa3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 HOXB3P14651 431 aaPredicted RBP3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 CADPS2Q86UW7 1296 aa3.61□□□□□ -1.83
HMGN2P39-201ENST00000398005 PDIA4P13667 645 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 PDAP1Q13442 181 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 IL27Q8NEV9 243 aa3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 ARHGEF1Q92888 912 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 CABP2Q9NPB3 220 aa3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 CCDC9Q9Y3X0 531 aaKnown RBP3.6□□□□□ -1.83
HMGN2P39-201ENST00000398005 SEMA3EO15041 775 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 ZMYND10O75800 440 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 SMYD5Q6GMV2 418 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 BOLA1Q9Y3E2 137 aa3.59□□□□□ -1.83
HMGN2P39-201ENST00000398005 TESPA1A2RU30 521 aaPredicted RBP3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 ARID3CA6NKF2 412 aa3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 E2F4Q16254 413 aa3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 GPBP1L1Q9HC44 474 aaPredicted RBP3.58□□□□□ -1.84
HMGN2P39-201ENST00000398005 APBB1O00213 710 aa3.57□□□□□ -1.84
HMGN2P39-201ENST00000398005 HOXB1P14653 301 aaPredicted RBP3.57□□□□□ -1.84
HMGN2P39-201ENST00000398005 TMEM92Q6UXU6 159 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 EFCAB3Q8N7B9 438 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 KRI1Q8N9T8 703 aaKnown RBP3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 AK7Q96M32 723 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 C1orf115Q9H7X2 142 aa3.56□□□□□ -1.84
HMGN2P39-201ENST00000398005 G3V3G9 751 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 BARGINQ6ZT62 677 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 KDM4CQ9H3R0 1056 aa3.55□□□□□ -1.84
HMGN2P39-201ENST00000398005 ERBB3P21860 1342 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 DOK7Q18PE1 504 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 ZNF710Q8N1W2 664 aa3.54□□□□□ -1.84
HMGN2P39-201ENST00000398005 VARS2Q5ST30 1063 aaKnown RBP3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 GPR153Q6NV75 609 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 MICALL2Q8IY33 904 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 MS4A4AQ96JQ5 239 aa3.53□□□□□ -1.84
HMGN2P39-201ENST00000398005 PDE4DQ08499 809 aa3.52□□□□□ -1.85
HMGN2P39-201ENST00000398005 GPIHBP1Q8IV16 184 aa3.52□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZNF316A6NFI3 1004 aaPredicted RBP3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 FLIIQ13045 1269 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZNF687Q8N1G0 1237 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 NECTIN2Q92692 538 aa3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 RNF166Q96A37 237 aaPredicted RBP3.51□□□□□ -1.85
HMGN2P39-201ENST00000398005 TRIM66O15016 1216 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 RIMBP2O15034 1052 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 SOX12O15370 315 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 RBM26Q5T8P6 1007 aaKnown RBP3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 CCDC82Q8N4S0 544 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 KCTD17Q8N5Z5 321 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 ZSWIM6Q9HCJ5 1215 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 PHF8Q9UPP1 1060 aa3.5□□□□□ -1.85
HMGN2P39-201ENST00000398005 ARSIQ5FYB1 569 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 KHSRPQ92945 711 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 MFRPQ9BY79 579 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 MYT1LQ9UL68 1186 aa3.49□□□□□ -1.85
HMGN2P39-201ENST00000398005 PPP1R37O75864 691 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 AEBP1Q8IUX7 1158 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 LARP6Q9BRS8 491 aaKnown RBP3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 FAM117AQ9C073 453 aa3.48□□□□□ -1.85
HMGN2P39-201ENST00000398005 RAD21O60216 631 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms