RNA–Protein interactions for RNA: ENST00000397644.2

LINC00887-201, long intergenic non-protein coding RNA 887, humanhuman

TSL 5

Gene LINC00887, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-201ENST00000397644 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
LINC00887-201ENST00000397644 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
LINC00887-201ENST00000397644 KDM5BQ9UGL1 1544 aa11.88□□□□□ -0.51
LINC00887-201ENST00000397644 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
LINC00887-201ENST00000397644 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
LINC00887-201ENST00000397644 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
LINC00887-201ENST00000397644 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
LINC00887-201ENST00000397644 ARID3CA6NKF2 412 aa11.85□□□□□ -0.51
LINC00887-201ENST00000397644 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
LINC00887-201ENST00000397644 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
LINC00887-201ENST00000397644 WDR7Q9Y4E6 1490 aa11.83□□□□□ -0.52
LINC00887-201ENST00000397644 CASKIN1Q8WXD9 1431 aa11.8□□□□□ -0.52
LINC00887-201ENST00000397644 SPDYE2BA6NHP3 402 aa11.8□□□□□ -0.52
LINC00887-201ENST00000397644 SPDYE6P0CI01 402 aa11.8□□□□□ -0.52
LINC00887-201ENST00000397644 SPDYE2Q495Y8 402 aa11.8□□□□□ -0.52
LINC00887-201ENST00000397644 CDK11AQ9UQ88 783 aaPredicted RBP11.8□□□□□ -0.52
LINC00887-201ENST00000397644 LRRIQ1Q96JM4 1722 aa11.8□□□□□ -0.52
LINC00887-201ENST00000397644 TEX14Q8IWB6 1497 aa11.78□□□□□ -0.52
LINC00887-201ENST00000397644 PLEKHD1A6NEE1 506 aa11.78□□□□□ -0.52
LINC00887-201ENST00000397644 ABCA9Q8IUA7 1624 aa11.78□□□□□ -0.52
LINC00887-201ENST00000397644 KANK4Q5T7N3 995 aaPredicted RBP11.77□□□□□ -0.53
LINC00887-201ENST00000397644 HECW1Q76N89 1606 aa11.75□□□□□ -0.53
LINC00887-201ENST00000397644 FYCO1Q9BQS8 1478 aa11.74□□□□□ -0.53
LINC00887-201ENST00000397644 KCNH8Q96L42 1107 aa11.73□□□□□ -0.53
LINC00887-201ENST00000397644 MYO5CQ9NQX4 1742 aa11.73□□□□□ -0.53
LINC00887-201ENST00000397644 TTC37Q6PGP7 1564 aa11.72□□□□□ -0.53
LINC00887-201ENST00000397644 CFAP74Q9C0B2 1584 aa11.72□□□□□ -0.53
LINC00887-201ENST00000397644 ATP10BO94823 1461 aa11.72□□□□□ -0.53
LINC00887-201ENST00000397644 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
LINC00887-201ENST00000397644 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
LINC00887-201ENST00000397644 CDK13Q14004 1512 aaKnown RBP11.7□□□□□ -0.54
LINC00887-201ENST00000397644 MTUS2Q5JR59 1369 aa11.7□□□□□ -0.54
LINC00887-201ENST00000397644 PITPNM1O00562 1244 aa11.7□□□□□ -0.54
LINC00887-201ENST00000397644 RTN4Q9NQC3 1192 aaKnown RBP11.7□□□□□ -0.54
LINC00887-201ENST00000397644 PCF11O94913 1555 aaKnown RBP11.7□□□□□ -0.54
LINC00887-201ENST00000397644 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
LINC00887-201ENST00000397644 CCDC18Q5T9S5 1454 aa11.69□□□□□ -0.54
LINC00887-201ENST00000397644 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
LINC00887-201ENST00000397644 FRMPD1Q5SYB0 1578 aa11.68□□□□□ -0.54
LINC00887-201ENST00000397644 MAP3K1Q13233 1512 aa11.67□□□□□ -0.54
LINC00887-201ENST00000397644 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
LINC00887-201ENST00000397644 COL17A1Q9UMD9 1497 aaPredicted RBP11.67□□□□□ -0.54
LINC00887-201ENST00000397644 CD109Q6YHK3 1445 aa11.67□□□□□ -0.54
LINC00887-201ENST00000397644 ADGRL1O94910 1474 aa11.66□□□□□ -0.54
LINC00887-201ENST00000397644 KIF14Q15058 1648 aa11.66□□□□□ -0.54
LINC00887-201ENST00000397644 LRRC9Q6ZRR7 1453 aa11.65□□□□□ -0.54
LINC00887-201ENST00000397644 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
LINC00887-201ENST00000397644 TIAM1Q13009 1591 aa11.64□□□□□ -0.55
LINC00887-201ENST00000397644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00887-201ENST00000397644 ARHGEF40Q8TER5 1519 aa11.63□□□□□ -0.55
LINC00887-201ENST00000397644 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
LINC00887-201ENST00000397644 TRIM26Q12899 539 aaPredicted RBP11.62□□□□□ -0.55
LINC00887-201ENST00000397644 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
LINC00887-201ENST00000397644 TROQ12816 1431 aaPredicted RBP11.61□□□□□ -0.55
LINC00887-201ENST00000397644 CDC42BPAQ5VT25 1732 aa11.6□□□□□ -0.55
LINC00887-201ENST00000397644 CDC42BPBQ9Y5S2 1711 aa11.6□□□□□ -0.55
LINC00887-201ENST00000397644 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
LINC00887-201ENST00000397644 ARAP3Q8WWN8 1544 aa11.59□□□□□ -0.55
LINC00887-201ENST00000397644 NEO1Q92859 1461 aa11.58□□□□□ -0.56
LINC00887-201ENST00000397644 BCORL1Q5H9F3 1711 aa11.58□□□□□ -0.56
LINC00887-201ENST00000397644 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
LINC00887-201ENST00000397644 CFDP1Q9UEE9 299 aaPredicted RBP11.58□□□□□ -0.56
LINC00887-201ENST00000397644 ZNF777Q9ULD5 760 aaPredicted RBP11.58□□□□□ -0.56
LINC00887-201ENST00000397644 SIGLEC1Q9BZZ2 1709 aa11.57□□□□□ -0.56
LINC00887-201ENST00000397644 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
LINC00887-201ENST00000397644 RIMS1Q86UR5 1692 aaKnown RBP11.57□□□□□ -0.56
LINC00887-201ENST00000397644 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
LINC00887-201ENST00000397644 FAM50AQ14320 339 aaKnown RBP11.57□□□□□ -0.56
LINC00887-201ENST00000397644 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
LINC00887-201ENST00000397644 FXR2P51116 673 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00887-201ENST00000397644 SPDYE1Q8NFV5 336 aaPredicted RBP11.56□□□□□ -0.56
LINC00887-201ENST00000397644 MADDQ8WXG6 1647 aa11.56□□□□□ -0.56
LINC00887-201ENST00000397644 FANCAO15360 1455 aa11.56□□□□□ -0.56
LINC00887-201ENST00000397644 NCOA2Q15596 1464 aa11.56□□□□□ -0.56
LINC00887-201ENST00000397644 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
LINC00887-201ENST00000397644 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
LINC00887-201ENST00000397644 ADAMTSL3P82987 1691 aa11.55□□□□□ -0.56
LINC00887-201ENST00000397644 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
LINC00887-201ENST00000397644 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
LINC00887-201ENST00000397644 ITGAEP38570 1179 aa11.54□□□□□ -0.56
LINC00887-201ENST00000397644 EFCAB2Q5VUJ9 269 aa11.54□□□□□ -0.56
LINC00887-201ENST00000397644 HECW2Q9P2P5 1572 aa11.53□□□□□ -0.56
LINC00887-201ENST00000397644 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.57
LINC00887-201ENST00000397644 ZFYVE16Q7Z3T8 1539 aa11.52□□□□□ -0.57
LINC00887-201ENST00000397644 KDM4FA0A1W2PPD8 638 aa11.52□□□□□ -0.57
LINC00887-201ENST00000397644 FKBP8Q14318 412 aa11.52□□□□□ -0.57
LINC00887-201ENST00000397644 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.57
LINC00887-201ENST00000397644 ZNF644Q9H582 1327 aaPredicted RBP11.5□□□□□ -0.57
LINC00887-201ENST00000397644 MYOM3Q5VTT5 1437 aa11.5□□□□□ -0.57
LINC00887-201ENST00000397644 DENND4BO75064 1496 aaPredicted RBP11.5□□□□□ -0.57
LINC00887-201ENST00000397644 GPATCH8Q9UKJ3 1502 aaKnown RBP11.5□□□□□ -0.57
LINC00887-201ENST00000397644 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
LINC00887-201ENST00000397644 AKNAQ7Z591 1439 aa11.49□□□□□ -0.57
LINC00887-201ENST00000397644 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
LINC00887-201ENST00000397644 PLCH2O75038 1416 aa11.48□□□□□ -0.57
LINC00887-201ENST00000397644 ABCC1P33527 1531 aa11.48□□□□□ -0.57
LINC00887-201ENST00000397644 FGD6Q6ZV73 1430 aa11.47□□□□□ -0.57
LINC00887-201ENST00000397644 POGZQ7Z3K3 1410 aa11.47□□□□□ -0.57
LINC00887-201ENST00000397644 MIA2Q96PC5 1412 aa11.47□□□□□ -0.57
LINC00887-201ENST00000397644 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms