RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-205ENST00000397406 PLCH2O75038 1416 aa26.15■■□□□ 1.78
TSPAN4-205ENST00000397406 KIF14Q15058 1648 aa26.14■■□□□ 1.77
TSPAN4-205ENST00000397406 DENND4BO75064 1496 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-205ENST00000397406 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
TSPAN4-205ENST00000397406 RICTORQ6R327 1708 aa26.1■■□□□ 1.77
TSPAN4-205ENST00000397406 CFAP74Q9C0B2 1584 aa26.05■■□□□ 1.76
TSPAN4-205ENST00000397406 SCAPERQ9BY12 1400 aa26.03■■□□□ 1.76
TSPAN4-205ENST00000397406 YEATS2Q9ULM3 1422 aa26.03■■□□□ 1.76
TSPAN4-205ENST00000397406 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-205ENST00000397406 ZMYM4Q5VZL5 1548 aa26.02■■□□□ 1.76
TSPAN4-205ENST00000397406 ARHGEF40Q8TER5 1519 aa26.01■■□□□ 1.75
TSPAN4-205ENST00000397406 POGZQ7Z3K3 1410 aa26■■□□□ 1.75
TSPAN4-205ENST00000397406 EFCAB2Q5VUJ9 269 aa25.99■■□□□ 1.75
TSPAN4-205ENST00000397406 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
TSPAN4-205ENST00000397406 ADAMTSL3P82987 1691 aa25.98■■□□□ 1.75
TSPAN4-205ENST00000397406 SIGLEC1Q9BZZ2 1709 aa25.97■■□□□ 1.75
TSPAN4-205ENST00000397406 MYO5CQ9NQX4 1742 aa25.97■■□□□ 1.75
TSPAN4-205ENST00000397406 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
TSPAN4-205ENST00000397406 CDC42BPAQ5VT25 1732 aa25.96■■□□□ 1.75
TSPAN4-205ENST00000397406 ITSN2Q9NZM3 1697 aa25.96■■□□□ 1.75
TSPAN4-205ENST00000397406 ZFYVE16Q7Z3T8 1539 aa25.93■■□□□ 1.74
TSPAN4-205ENST00000397406 BCORL1Q5H9F3 1711 aa25.92■■□□□ 1.74
TSPAN4-205ENST00000397406 FGD6Q6ZV73 1430 aa25.92■■□□□ 1.74
TSPAN4-205ENST00000397406 ARHGAP5Q13017 1502 aa25.92■■□□□ 1.74
TSPAN4-205ENST00000397406 MAGI2Q86UL8 1455 aa25.92■■□□□ 1.74
TSPAN4-205ENST00000397406 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
TSPAN4-205ENST00000397406 ARHGEF12Q9NZN5 1544 aa25.91■■□□□ 1.74
TSPAN4-205ENST00000397406 GPATCH8Q9UKJ3 1502 aaKnown RBP25.91■■□□□ 1.74
TSPAN4-205ENST00000397406 CDC42BPBQ9Y5S2 1711 aa25.9■■□□□ 1.74
TSPAN4-205ENST00000397406 AFAP1Q8N556 730 aa25.9■■□□□ 1.74
TSPAN4-205ENST00000397406 PTPRMP28827 1452 aa25.9■■□□□ 1.74
TSPAN4-205ENST00000397406 ARID4BQ4LE39 1312 aaPredicted RBP25.9■■□□□ 1.74
TSPAN4-205ENST00000397406 HECW2Q9P2P5 1572 aa25.89■■□□□ 1.73
TSPAN4-205ENST00000397406 PREX2Q70Z35 1606 aa25.88■■□□□ 1.73
TSPAN4-205ENST00000397406 PTPN23Q9H3S7 1636 aa25.88■■□□□ 1.73
TSPAN4-205ENST00000397406 MIA2Q96PC5 1412 aa25.87■■□□□ 1.73
TSPAN4-205ENST00000397406 MADDQ8WXG6 1647 aa25.86■■□□□ 1.73
TSPAN4-205ENST00000397406 KDM5CP41229 1560 aa25.84■■□□□ 1.73
TSPAN4-205ENST00000397406 TRAPPC8Q9Y2L5 1435 aa25.84■■□□□ 1.73
TSPAN4-205ENST00000397406 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
TSPAN4-205ENST00000397406 TCOF1Q13428 1488 aaKnown RBP25.83■■□□□ 1.73
TSPAN4-205ENST00000397406 ZNF518AQ6AHZ1 1483 aa25.82■■□□□ 1.72
TSPAN4-205ENST00000397406 ABCC1P33527 1531 aa25.82■■□□□ 1.72
TSPAN4-205ENST00000397406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.723e-6■■■■■ 46.2
TSPAN4-205ENST00000397406 ATP10AO60312 1499 aa25.81■■□□□ 1.72
TSPAN4-205ENST00000397406 C9orf84Q5VXU9 1444 aa25.76■■□□□ 1.71
TSPAN4-205ENST00000397406 CFDP1Q9UEE9 299 aaPredicted RBP25.76■■□□□ 1.71
TSPAN4-205ENST00000397406 MLECQ14165 292 aa25.75■■□□□ 1.71
TSPAN4-205ENST00000397406 SAMD9LQ8IVG5 1584 aa25.74■■□□□ 1.71
TSPAN4-205ENST00000397406 CAMSAP2Q08AD1 1489 aa25.74■■□□□ 1.71
TSPAN4-205ENST00000397406 MLH3Q9UHC1 1453 aa25.74■■□□□ 1.71
TSPAN4-205ENST00000397406 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
TSPAN4-205ENST00000397406 FAM50AQ14320 339 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-205ENST00000397406 RIMS1Q86UR5 1692 aaKnown RBP25.73■■□□□ 1.71
TSPAN4-205ENST00000397406 ZNF777Q9ULD5 760 aaPredicted RBP25.71■■□□□ 1.71
TSPAN4-205ENST00000397406 ABCA6Q8N139 1617 aa25.7■■□□□ 1.7
TSPAN4-205ENST00000397406 ZNF644Q9H582 1327 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-205ENST00000397406 HNRNPMP52272 730 aaKnown RBP eCLIP25.68■■□□□ 1.7
TSPAN4-205ENST00000397406 SYCP2Q9BX26 1530 aa25.67■■□□□ 1.7
TSPAN4-205ENST00000397406 DNMT1P26358 1616 aaKnown RBP25.67■■□□□ 1.7
TSPAN4-205ENST00000397406 LMTK3Q96Q04 1460 aa25.65■■□□□ 1.7
TSPAN4-205ENST00000397406 KIDINS220Q9ULH0 1771 aa25.65■■□□□ 1.7
TSPAN4-205ENST00000397406 REREQ9P2R6 1566 aa25.65■■□□□ 1.7
TSPAN4-205ENST00000397406 CROCC2H7BZ55 1655 aa25.63■■□□□ 1.69
TSPAN4-205ENST00000397406 KIAA1107Q9UPP5 1409 aa25.63■■□□□ 1.69
TSPAN4-205ENST00000397406 PLPPR3Q6T4P5 718 aa25.63■■□□□ 1.69
TSPAN4-205ENST00000397406 MYT1LQ9UL68 1186 aa25.63■■□□□ 1.69
TSPAN4-205ENST00000397406 ARHGEF5Q12774 1597 aa25.61■■□□□ 1.69
TSPAN4-205ENST00000397406 PLEKHH2Q8IVE3 1493 aa25.6■■□□□ 1.69
TSPAN4-205ENST00000397406 DAPK1P53355 1430 aa25.59■■□□□ 1.69
TSPAN4-205ENST00000397406 PTPRKQ15262 1439 aa25.59■■□□□ 1.69
TSPAN4-205ENST00000397406 FER1L4A9Z1Z3 1794 aa25.59■■□□□ 1.69
TSPAN4-205ENST00000397406 ITGAEP38570 1179 aa25.59■■□□□ 1.69
TSPAN4-205ENST00000397406 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-205ENST00000397406 MBD5Q9P267 1494 aa25.58■■□□□ 1.69
TSPAN4-205ENST00000397406 AGLP35573 1532 aa25.58■■□□□ 1.69
TSPAN4-205ENST00000397406 ABCC5O15440 1437 aa25.58■■□□□ 1.69
TSPAN4-205ENST00000397406 SPAG9O60271 1321 aaKnown RBP25.55■■□□□ 1.68
TSPAN4-205ENST00000397406 HSPA2P54652 639 aa25.54■■□□□ 1.68
TSPAN4-205ENST00000397406 ADGBQ8N7X0 1667 aa25.52■■□□□ 1.68
TSPAN4-205ENST00000397406 INO80Q9ULG1 1556 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-205ENST00000397406 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
TSPAN4-205ENST00000397406 ATP7AQ04656 1500 aa25.51■■□□□ 1.67
TSPAN4-205ENST00000397406 SHANK2Q9UPX8 1470 aa25.5■■□□□ 1.67
TSPAN4-205ENST00000397406 MAST1Q9Y2H9 1570 aa25.47■■□□□ 1.67
TSPAN4-205ENST00000397406 RSPH4AQ5TD94 716 aa25.46■■□□□ 1.67
TSPAN4-205ENST00000397406 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
TSPAN4-205ENST00000397406 GCC2Q8IWJ2 1684 aa25.45■■□□□ 1.66
TSPAN4-205ENST00000397406 ILDR1Q86SU0 546 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-205ENST00000397406 ADGRL2O95490 1459 aa25.45■■□□□ 1.66
TSPAN4-205ENST00000397406 ROCK1Q13464 1354 aa25.44■■□□□ 1.66
TSPAN4-205ENST00000397406 A2MP01023 1474 aa25.43■■□□□ 1.66
TSPAN4-205ENST00000397406 CHIC2Q9UKJ5 165 aa25.42■■□□□ 1.66
TSPAN4-205ENST00000397406 HFM1A2PYH4 1435 aa25.42■■□□□ 1.66
TSPAN4-205ENST00000397406 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.65
TSPAN4-205ENST00000397406 NAIPQ13075 1403 aa25.39■■□□□ 1.65
TSPAN4-205ENST00000397406 C3P01024 1663 aa25.38■■□□□ 1.65
TSPAN4-205ENST00000397406 NCOA1Q15788 1441 aa25.38■■□□□ 1.65
TSPAN4-205ENST00000397406 SETD5Q9C0A6 1442 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms