RNA–Protein interactions for RNA: ENST00000397349.6

SMIM7-202, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,122 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-202ENST00000397349 ATP10BO94823 1461 aa13.36□□□□□ -0.27
SMIM7-202ENST00000397349 MAGI3Q5TCQ9 1506 aa13.35□□□□□ -0.27
SMIM7-202ENST00000397349 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
SMIM7-202ENST00000397349 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
SMIM7-202ENST00000397349 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
SMIM7-202ENST00000397349 KIF14Q15058 1648 aa13.31□□□□□ -0.28
SMIM7-202ENST00000397349 MTUS2Q5JR59 1369 aa13.31□□□□□ -0.28
SMIM7-202ENST00000397349 KANK4Q5T7N3 995 aaPredicted RBP13.3□□□□□ -0.28
SMIM7-202ENST00000397349 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
SMIM7-202ENST00000397349 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
SMIM7-202ENST00000397349 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
SMIM7-202ENST00000397349 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
SMIM7-202ENST00000397349 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMIM7-202ENST00000397349 TROQ12816 1431 aaPredicted RBP13.27□□□□□ -0.29
SMIM7-202ENST00000397349 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
SMIM7-202ENST00000397349 CDC42BPBQ9Y5S2 1711 aa13.25□□□□□ -0.29
SMIM7-202ENST00000397349 PLEKHD1A6NEE1 506 aa13.25□□□□□ -0.29
SMIM7-202ENST00000397349 NCOA2Q15596 1464 aa13.24□□□□□ -0.29
SMIM7-202ENST00000397349 KIF13AQ9H1H9 1805 aa13.24□□□□□ -0.29
SMIM7-202ENST00000397349 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
SMIM7-202ENST00000397349 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
SMIM7-202ENST00000397349 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
SMIM7-202ENST00000397349 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
SMIM7-202ENST00000397349 ASXL2Q76L83 1435 aa13.22□□□□□ -0.29
SMIM7-202ENST00000397349 PREX2Q70Z35 1606 aa13.22□□□□□ -0.29
SMIM7-202ENST00000397349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMIM7-202ENST00000397349 ABCA9Q8IUA7 1624 aa13.2□□□□□ -0.3
SMIM7-202ENST00000397349 PTPN23Q9H3S7 1636 aa13.19□□□□□ -0.3
SMIM7-202ENST00000397349 KCNH8Q96L42 1107 aa13.18□□□□□ -0.3
SMIM7-202ENST00000397349 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
SMIM7-202ENST00000397349 DIP2BQ9P265 1576 aa13.17□□□□□ -0.3
SMIM7-202ENST00000397349 PHLDB1Q86UU1 1377 aa13.17□□□□□ -0.3
SMIM7-202ENST00000397349 CCNB3Q8WWL7 1395 aa13.16□□□□□ -0.3
SMIM7-202ENST00000397349 MAP3K4Q9Y6R4 1608 aa13.16□□□□□ -0.3
SMIM7-202ENST00000397349 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
SMIM7-202ENST00000397349 GLI2P10070 1586 aa13.13□□□□□ -0.31
SMIM7-202ENST00000397349 ZBTB12Q9Y330 459 aaPredicted RBP13.13□□□□□ -0.31
SMIM7-202ENST00000397349 ARHGAP5Q13017 1502 aa13.13□□□□□ -0.31
SMIM7-202ENST00000397349 GPATCH8Q9UKJ3 1502 aaKnown RBP13.13□□□□□ -0.31
SMIM7-202ENST00000397349 CFAP74Q9C0B2 1584 aa13.12□□□□□ -0.31
SMIM7-202ENST00000397349 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
SMIM7-202ENST00000397349 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
SMIM7-202ENST00000397349 RRBP1Q9P2E9 1410 aaKnown RBP13.12□□□□□ -0.31
SMIM7-202ENST00000397349 CROCC2H7BZ55 1655 aa13.12□□□□□ -0.31
SMIM7-202ENST00000397349 PPRC1Q5VV67 1664 aaKnown RBP13.12□□□□□ -0.31
SMIM7-202ENST00000397349 SAMD9LQ8IVG5 1584 aa13.11□□□□□ -0.31
SMIM7-202ENST00000397349 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
SMIM7-202ENST00000397349 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
SMIM7-202ENST00000397349 ADGBQ8N7X0 1667 aa13.08□□□□□ -0.31
SMIM7-202ENST00000397349 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
SMIM7-202ENST00000397349 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
SMIM7-202ENST00000397349 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
SMIM7-202ENST00000397349 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
SMIM7-202ENST00000397349 PLCH2O75038 1416 aa13.06□□□□□ -0.32
SMIM7-202ENST00000397349 FAM50AQ14320 339 aaKnown RBP13.06□□□□□ -0.32
SMIM7-202ENST00000397349 CFDP1Q9UEE9 299 aaPredicted RBP13.06□□□□□ -0.32
SMIM7-202ENST00000397349 CD109Q6YHK3 1445 aa13.05□□□□□ -0.32
SMIM7-202ENST00000397349 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
SMIM7-202ENST00000397349 ABCC1P33527 1531 aa13.04□□□□□ -0.32
SMIM7-202ENST00000397349 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
SMIM7-202ENST00000397349 SYCP2Q9BX26 1530 aa13.03□□□□□ -0.32
SMIM7-202ENST00000397349 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
SMIM7-202ENST00000397349 PCGF6Q9BYE7 350 aa13.02□□□□□ -0.33
SMIM7-202ENST00000397349 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMIM7-202ENST00000397349 FANCAO15360 1455 aa13.02□□□□□ -0.33
SMIM7-202ENST00000397349 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
SMIM7-202ENST00000397349 PLEKHH2Q8IVE3 1493 aa13□□□□□ -0.33
SMIM7-202ENST00000397349 ITGAEP38570 1179 aa13□□□□□ -0.33
SMIM7-202ENST00000397349 EFCAB2Q5VUJ9 269 aa13□□□□□ -0.33
SMIM7-202ENST00000397349 RICTORQ6R327 1708 aa12.99□□□□□ -0.33
SMIM7-202ENST00000397349 GCC2Q8IWJ2 1684 aa12.99□□□□□ -0.33
SMIM7-202ENST00000397349 ADGRL1O94910 1474 aa12.97□□□□□ -0.33
SMIM7-202ENST00000397349 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
SMIM7-202ENST00000397349 DAPK1P53355 1430 aa12.97□□□□□ -0.33
SMIM7-202ENST00000397349 AKNAQ7Z591 1439 aa12.97□□□□□ -0.33
SMIM7-202ENST00000397349 NEO1Q92859 1461 aa12.97□□□□□ -0.33
SMIM7-202ENST00000397349 ARHGEF12Q9NZN5 1544 aa12.96□□□□□ -0.33
SMIM7-202ENST00000397349 CCDC141Q6ZP82 1450 aa12.96□□□□□ -0.34
SMIM7-202ENST00000397349 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
SMIM7-202ENST00000397349 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.34
SMIM7-202ENST00000397349 MKRN4PQ13434 485 aaPredicted RBP12.95□□□□□ -0.34
SMIM7-202ENST00000397349 ABCC5O15440 1437 aa12.95□□□□□ -0.34
SMIM7-202ENST00000397349 KIAA1107Q9UPP5 1409 aa12.95□□□□□ -0.34
SMIM7-202ENST00000397349 MBD5Q9P267 1494 aa12.94□□□□□ -0.34
SMIM7-202ENST00000397349 KIDINS220Q9ULH0 1771 aa12.93□□□□□ -0.34
SMIM7-202ENST00000397349 PTPRKQ15262 1439 aa12.93□□□□□ -0.34
SMIM7-202ENST00000397349 SCAPERQ9BY12 1400 aa12.93□□□□□ -0.34
SMIM7-202ENST00000397349 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
SMIM7-202ENST00000397349 INO80Q9ULG1 1556 aaPredicted RBP12.92□□□□□ -0.34
SMIM7-202ENST00000397349 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
SMIM7-202ENST00000397349 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
SMIM7-202ENST00000397349 HECW2Q9P2P5 1572 aa12.91□□□□□ -0.34
SMIM7-202ENST00000397349 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
SMIM7-202ENST00000397349 C9orf84Q5VXU9 1444 aa12.9□□□□□ -0.34
SMIM7-202ENST00000397349 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
SMIM7-202ENST00000397349 DENND4BO75064 1496 aaPredicted RBP12.9□□□□□ -0.34
SMIM7-202ENST00000397349 KDM5CP41229 1560 aa12.9□□□□□ -0.35
SMIM7-202ENST00000397349 ATP7AQ04656 1500 aa12.89□□□□□ -0.35
SMIM7-202ENST00000397349 ZFYVE16Q7Z3T8 1539 aa12.89□□□□□ -0.35
SMIM7-202ENST00000397349 POTEHQ6S545 545 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms