RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
MCF2L-208ENST00000397030 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
MCF2L-208ENST00000397030 RB1CC1Q8TDY2 1594 aa22.3■■□□□ 1.16
MCF2L-208ENST00000397030 CHMP4BQ9H444 224 aaKnown RBP22.3■■□□□ 1.16
MCF2L-208ENST00000397030 ERICH6BQ5W0A0 696 aa22.29■■□□□ 1.16
MCF2L-208ENST00000397030 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
MCF2L-208ENST00000397030 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
MCF2L-208ENST00000397030 VPS53Q5VIR6 699 aa22.28■■□□□ 1.16
MCF2L-208ENST00000397030 SUPT16HQ9Y5B9 1047 aaKnown RBP22.28■■□□□ 1.16
MCF2L-208ENST00000397030 SIN3AQ96ST3 1273 aa22.27■■□□□ 1.16
MCF2L-208ENST00000397030 DRC7Q8IY82 874 aa22.26■■□□□ 1.15
MCF2L-208ENST00000397030 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
MCF2L-208ENST00000397030 MCCP23508 829 aa22.25■■□□□ 1.15
MCF2L-208ENST00000397030 FRAT2O75474 233 aaPredicted RBP22.25■■□□□ 1.15
MCF2L-208ENST00000397030 KRI1Q8N9T8 703 aaKnown RBP22.25■■□□□ 1.15
MCF2L-208ENST00000397030 EID1Q9Y6B2 187 aa22.23■■□□□ 1.15
MCF2L-208ENST00000397030 MS4A1P11836 297 aa22.22■■□□□ 1.15
MCF2L-208ENST00000397030 NGDNQ8NEJ9 315 aaKnown RBP22.21■■□□□ 1.15
MCF2L-208ENST00000397030 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
MCF2L-208ENST00000397030 GOLGA3Q08378 1498 aa22.19■■□□□ 1.14
MCF2L-208ENST00000397030 EVA1CP58658 441 aa22.19■■□□□ 1.14
MCF2L-208ENST00000397030 NRDCO43847 1150 aa22.19■■□□□ 1.14
MCF2L-208ENST00000397030 KIAA2012Q0VF49 1180 aa22.19■■□□□ 1.14
MCF2L-208ENST00000397030 KIAA1211Q6ZU35 1233 aa22.18■■□□□ 1.14
MCF2L-208ENST00000397030 HSP90B1P14625 803 aaKnown RBP22.18■■□□□ 1.14
MCF2L-208ENST00000397030 NOC3LQ8WTT2 800 aaKnown RBP22.15■■□□□ 1.14
MCF2L-208ENST00000397030 HSCBQ8IWL3 235 aa22.15■■□□□ 1.14
MCF2L-208ENST00000397030 TOMM22Q9NS69 142 aa22.15■■□□□ 1.14
MCF2L-208ENST00000397030 B4GALNT3Q6L9W6 998 aa22.14■■□□□ 1.14
MCF2L-208ENST00000397030 RAD21O60216 631 aa22.14■■□□□ 1.13
MCF2L-208ENST00000397030 CREBRFQ8IUR6 639 aa22.13■■□□□ 1.13
MCF2L-208ENST00000397030 FOXD1Q16676 465 aa22.13■■□□□ 1.13
MCF2L-208ENST00000397030 U2AF1L5P0DN76 240 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-208ENST00000397030 U2AF1Q01081 240 aaKnown RBP eCLIP22.12■■□□□ 1.13
MCF2L-208ENST00000397030 RASSF8Q8NHQ8 419 aa22.12■■□□□ 1.13
MCF2L-208ENST00000397030 NAP1L5Q96NT1 182 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-208ENST00000397030 FBXW7Q969H0 707 aa22.12■■□□□ 1.13
MCF2L-208ENST00000397030 WWC1Q8IX03 1113 aa22.11■■□□□ 1.13
MCF2L-208ENST00000397030 AMPHP49418 695 aa22.1■■□□□ 1.13
MCF2L-208ENST00000397030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.1■■□□□ 1.135e-6■■■■□ 20.3
MCF2L-208ENST00000397030 CEP162Q5TB80 1403 aa22.09■■□□□ 1.13
MCF2L-208ENST00000397030 ITPRIPQ8IWB1 547 aa22.09■■□□□ 1.13
MCF2L-208ENST00000397030 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
MCF2L-208ENST00000397030 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
MCF2L-208ENST00000397030 SPAG9O60271 1321 aaKnown RBP22.08■■□□□ 1.13
MCF2L-208ENST00000397030 MARCH6O60337 910 aa22.08■■□□□ 1.12
MCF2L-208ENST00000397030 CHAF1AQ13111 956 aaPredicted RBP22.07■■□□□ 1.12
MCF2L-208ENST00000397030 SYTL4Q96C24 671 aaPredicted RBP22.06■■□□□ 1.12
MCF2L-208ENST00000397030 STK31Q9BXU1 1019 aa22.05■■□□□ 1.12
MCF2L-208ENST00000397030 FBXO3Q9UK99 471 aa22.04■■□□□ 1.12
MCF2L-208ENST00000397030 KIF3BO15066 747 aa22.04■■□□□ 1.12
MCF2L-208ENST00000397030 TRIM6-TRIM34B2RNG4 842 aa22.03■■□□□ 1.12
MCF2L-208ENST00000397030 CWC22Q9HCG8 908 aaKnown RBP22.03■■□□□ 1.12
MCF2L-208ENST00000397030 RTN4Q9NQC3 1192 aaKnown RBP22.03■■□□□ 1.12
MCF2L-208ENST00000397030 DCAF8L1A6NGE4 600 aa22.03■■□□□ 1.12
MCF2L-208ENST00000397030 PKD2Q13563 968 aa22.02■■□□□ 1.12
MCF2L-208ENST00000397030 NGEFQ8N5V2 710 aa22.02■■□□□ 1.12
MCF2L-208ENST00000397030 CTDP1Q9Y5B0 961 aaPredicted RBP22.01■■□□□ 1.11
MCF2L-208ENST00000397030 CNKSR2Q8WXI2 1034 aa22.01■■□□□ 1.11
MCF2L-208ENST00000397030 NOL8Q76FK4 1167 aaKnown RBP22■■□□□ 1.11
MCF2L-208ENST00000397030 TRIM34Q9BYJ4 488 aa22■■□□□ 1.11
MCF2L-208ENST00000397030 GPATCH3Q96I76 525 aa22■■□□□ 1.11
MCF2L-208ENST00000397030 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
MCF2L-208ENST00000397030 L1TD1Q5T7N2 865 aaKnown RBP21.97■■□□□ 1.11
MCF2L-208ENST00000397030 ROCK2O75116 1388 aaKnown RBP21.97■■□□□ 1.11
MCF2L-208ENST00000397030 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
MCF2L-208ENST00000397030 CYB5RLQ6IPT4 315 aa21.96■■□□□ 1.11
MCF2L-208ENST00000397030 SAMD1Q6SPF0 538 aaPredicted RBP21.96■■□□□ 1.11
MCF2L-208ENST00000397030 CUX2O14529 1486 aa21.95■■□□□ 1.1
MCF2L-208ENST00000397030 CALD1Q05682 793 aaKnown RBP21.95■■□□□ 1.1
MCF2L-208ENST00000397030 TCEAL9Q9UHQ7 104 aa21.94■■□□□ 1.1
MCF2L-208ENST00000397030 CARMIL2Q6F5E8 1435 aa21.94■■□□□ 1.1
MCF2L-208ENST00000397030 A0A0U1RQG5 324 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-208ENST00000397030 HNRNPMP52272 730 aaKnown RBP eCLIP21.92■■□□□ 1.1
MCF2L-208ENST00000397030 EFCAB2Q5VUJ9 269 aa21.92■■□□□ 1.1
MCF2L-208ENST00000397030 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
MCF2L-208ENST00000397030 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
MCF2L-208ENST00000397030 EEA1Q15075 1411 aa21.9■■□□□ 1.1
MCF2L-208ENST00000397030 C1orf141Q5JVX7 400 aa21.9■■□□□ 1.1
MCF2L-208ENST00000397030 KTN1Q86UP2 1357 aaKnown RBP21.89■■□□□ 1.1
MCF2L-208ENST00000397030 CARMIL1Q5VZK9 1371 aa21.89■■□□□ 1.09
MCF2L-208ENST00000397030 PPP1R1BQ9UD71 204 aaPredicted RBP21.88■■□□□ 1.09
MCF2L-208ENST00000397030 TERF2IPQ9NYB0 399 aa21.88■■□□□ 1.09
MCF2L-208ENST00000397030 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
MCF2L-208ENST00000397030 CEP89Q96ST8 783 aa21.86■■□□□ 1.09
MCF2L-208ENST00000397030 SMC4Q9NTJ3 1288 aa21.86■■□□□ 1.09
MCF2L-208ENST00000397030 MSNP26038 577 aaKnown RBP21.86■■□□□ 1.09
MCF2L-208ENST00000397030 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
MCF2L-208ENST00000397030 PES1O00541 588 aaKnown RBP21.85■■□□□ 1.09
MCF2L-208ENST00000397030 NOL10Q9BSC4 688 aaKnown RBP21.84■■□□□ 1.09
MCF2L-208ENST00000397030 HSPA5P11021 654 aaKnown RBP21.84■■□□□ 1.09
MCF2L-208ENST00000397030 FOXD4L1Q9NU39 408 aa21.84■■□□□ 1.09
MCF2L-208ENST00000397030 TRAK1Q9UPV9 953 aa21.84■■□□□ 1.09
MCF2L-208ENST00000397030 NUP155O75694 1391 aa21.84■■□□□ 1.09
MCF2L-208ENST00000397030 ARID3AQ99856 593 aa21.82■■□□□ 1.08
MCF2L-208ENST00000397030 TPM4P67936 248 aa21.82■■□□□ 1.08
MCF2L-208ENST00000397030 HTATSF1O43719 755 aaKnown RBP21.81■■□□□ 1.08
MCF2L-208ENST00000397030 EIF3AQ14152 1382 aaKnown RBP21.8■■□□□ 1.08
MCF2L-208ENST00000397030 CFAP44Q96MT7 982 aa21.8■■□□□ 1.08
MCF2L-208ENST00000397030 MFAP1P55081 439 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms