RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 RAPGEF3O95398 923 aa17.78■□□□□ 0.44
NDUFA9-202ENST00000396655 DENND4BO75064 1496 aaPredicted RBP17.77■□□□□ 0.44
NDUFA9-202ENST00000396655 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
NDUFA9-202ENST00000396655 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
NDUFA9-202ENST00000396655 RICTORQ6R327 1708 aa17.72■□□□□ 0.43
NDUFA9-202ENST00000396655 FRMPD1Q5SYB0 1578 aa17.71■□□□□ 0.43
NDUFA9-202ENST00000396655 MAGI2Q86UL8 1455 aa17.71■□□□□ 0.43
NDUFA9-202ENST00000396655 SCAPERQ9BY12 1400 aa17.7■□□□□ 0.42
NDUFA9-202ENST00000396655 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
NDUFA9-202ENST00000396655 ZMYM4Q5VZL5 1548 aa17.68■□□□□ 0.42
NDUFA9-202ENST00000396655 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
NDUFA9-202ENST00000396655 POGZQ7Z3K3 1410 aa17.67■□□□□ 0.42
NDUFA9-202ENST00000396655 MTUS2Q5JR59 1369 aa17.66■□□□□ 0.42
NDUFA9-202ENST00000396655 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
NDUFA9-202ENST00000396655 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
NDUFA9-202ENST00000396655 VPS8Q8N3P4 1428 aa17.64■□□□□ 0.42
NDUFA9-202ENST00000396655 PIAS4Q8N2W9 510 aaPredicted RBP17.64■□□□□ 0.41
NDUFA9-202ENST00000396655 ZNF518AQ6AHZ1 1483 aa17.63■□□□□ 0.41
NDUFA9-202ENST00000396655 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
NDUFA9-202ENST00000396655 CDC42BPAQ5VT25 1732 aa17.62■□□□□ 0.41
NDUFA9-202ENST00000396655 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
NDUFA9-202ENST00000396655 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
NDUFA9-202ENST00000396655 EHBP1L1Q8N3D4 1523 aa17.6■□□□□ 0.41
NDUFA9-202ENST00000396655 CCNB3Q8WWL7 1395 aa17.59■□□□□ 0.41
NDUFA9-202ENST00000396655 KDM5CP41229 1560 aa17.58■□□□□ 0.41
NDUFA9-202ENST00000396655 MAP3K1Q13233 1512 aa17.58■□□□□ 0.41
NDUFA9-202ENST00000396655 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
NDUFA9-202ENST00000396655 CFDP1Q9UEE9 299 aaPredicted RBP17.58■□□□□ 0.4
NDUFA9-202ENST00000396655 ABCC1P33527 1531 aa17.57■□□□□ 0.4
NDUFA9-202ENST00000396655 ATP10AO60312 1499 aa17.56■□□□□ 0.4
NDUFA9-202ENST00000396655 PLEKHH2Q8IVE3 1493 aa17.56■□□□□ 0.4
NDUFA9-202ENST00000396655 MLH3Q9UHC1 1453 aa17.56■□□□□ 0.4
NDUFA9-202ENST00000396655 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
NDUFA9-202ENST00000396655 KIAA1107Q9UPP5 1409 aa17.56■□□□□ 0.4
NDUFA9-202ENST00000396655 ARID4BQ4LE39 1312 aaPredicted RBP17.55■□□□□ 0.4
NDUFA9-202ENST00000396655 TIAM1Q13009 1591 aa17.55■□□□□ 0.4
NDUFA9-202ENST00000396655 ADAMTSL3P82987 1691 aa17.55■□□□□ 0.4
NDUFA9-202ENST00000396655 ARHGEF12Q9NZN5 1544 aa17.53■□□□□ 0.4
NDUFA9-202ENST00000396655 BCORL1Q5H9F3 1711 aa17.53■□□□□ 0.4
NDUFA9-202ENST00000396655 TRAPPC8Q9Y2L5 1435 aa17.53■□□□□ 0.4
NDUFA9-202ENST00000396655 ITSN2Q9NZM3 1697 aa17.52■□□□□ 0.39
NDUFA9-202ENST00000396655 LRRC9Q6ZRR7 1453 aa17.51■□□□□ 0.39
NDUFA9-202ENST00000396655 C9orf84Q5VXU9 1444 aa17.51■□□□□ 0.39
NDUFA9-202ENST00000396655 SAMD9LQ8IVG5 1584 aa17.51■□□□□ 0.39
NDUFA9-202ENST00000396655 ZNF777Q9ULD5 760 aaPredicted RBP17.51■□□□□ 0.39
NDUFA9-202ENST00000396655 SUPT6HQ7KZ85 1726 aaKnown RBP17.5■□□□□ 0.39
NDUFA9-202ENST00000396655 NCOA2Q15596 1464 aa17.5■□□□□ 0.39
NDUFA9-202ENST00000396655 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
NDUFA9-202ENST00000396655 HNRNPMP52272 730 aaKnown RBP eCLIP17.48■□□□□ 0.39
NDUFA9-202ENST00000396655 RSPH4AQ5TD94 716 aa17.48■□□□□ 0.39
NDUFA9-202ENST00000396655 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
NDUFA9-202ENST00000396655 PTPRMP28827 1452 aa17.47■□□□□ 0.39
NDUFA9-202ENST00000396655 APLP2Q06481 763 aa17.46■□□□□ 0.39
NDUFA9-202ENST00000396655 SYCP2Q9BX26 1530 aa17.46■□□□□ 0.39
NDUFA9-202ENST00000396655 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
NDUFA9-202ENST00000396655 DIP2CQ9Y2E4 1556 aa17.45■□□□□ 0.38
NDUFA9-202ENST00000396655 KIDINS220Q9ULH0 1771 aa17.44■□□□□ 0.38
NDUFA9-202ENST00000396655 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
NDUFA9-202ENST00000396655 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
NDUFA9-202ENST00000396655 AGLP35573 1532 aa17.43■□□□□ 0.38
NDUFA9-202ENST00000396655 LMTK3Q96Q04 1460 aa17.43■□□□□ 0.38
NDUFA9-202ENST00000396655 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
NDUFA9-202ENST00000396655 KANK4Q5T7N3 995 aaPredicted RBP17.42■□□□□ 0.38
NDUFA9-202ENST00000396655 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
NDUFA9-202ENST00000396655 ZNF644Q9H582 1327 aaPredicted RBP17.42■□□□□ 0.38
NDUFA9-202ENST00000396655 RTEL1-TNFRSF6BF6WH68 1400 aa17.41■□□□□ 0.38
NDUFA9-202ENST00000396655 MIA2Q96PC5 1412 aa17.39■□□□□ 0.38
NDUFA9-202ENST00000396655 ATP7AQ04656 1500 aa17.38■□□□□ 0.37
NDUFA9-202ENST00000396655 INO80Q9ULG1 1556 aaPredicted RBP17.38■□□□□ 0.37
NDUFA9-202ENST00000396655 MLECQ14165 292 aa17.37■□□□□ 0.37
NDUFA9-202ENST00000396655 CAMSAP2Q08AD1 1489 aa17.37■□□□□ 0.37
NDUFA9-202ENST00000396655 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
NDUFA9-202ENST00000396655 MYOM3Q5VTT5 1437 aa17.36■□□□□ 0.37
NDUFA9-202ENST00000396655 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
NDUFA9-202ENST00000396655 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
NDUFA9-202ENST00000396655 ARHGEF5Q12774 1597 aa17.35■□□□□ 0.37
NDUFA9-202ENST00000396655 A2MP01023 1474 aa17.33■□□□□ 0.37
NDUFA9-202ENST00000396655 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
NDUFA9-202ENST00000396655 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
NDUFA9-202ENST00000396655 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
NDUFA9-202ENST00000396655 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
NDUFA9-202ENST00000396655 CNTLNQ9NXG0 1405 aa17.31■□□□□ 0.36
NDUFA9-202ENST00000396655 DHX29Q7Z478 1369 aaKnown RBP17.3■□□□□ 0.36
NDUFA9-202ENST00000396655 SETD1BQ9UPS6 1966 aaKnown RBP17.3■□□□□ 0.36
NDUFA9-202ENST00000396655 ILDR2Q71H61 639 aa17.3■□□□□ 0.36
NDUFA9-202ENST00000396655 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
NDUFA9-202ENST00000396655 HSPA2P54652 639 aa17.26■□□□□ 0.35
NDUFA9-202ENST00000396655 MAST1Q9Y2H9 1570 aa17.25■□□□□ 0.35
NDUFA9-202ENST00000396655 FGD6Q6ZV73 1430 aa17.23■□□□□ 0.35
NDUFA9-202ENST00000396655 SOCS7O14512 581 aa17.23■□□□□ 0.35
NDUFA9-202ENST00000396655 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
NDUFA9-202ENST00000396655 MROH2AA6NES4 1674 aa17.23■□□□□ 0.35
NDUFA9-202ENST00000396655 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
NDUFA9-202ENST00000396655 DISP3Q9P2K9 1392 aa17.22■□□□□ 0.35
NDUFA9-202ENST00000396655 TCOF1Q13428 1488 aaKnown RBP17.22■□□□□ 0.35
NDUFA9-202ENST00000396655 GGT6Q6P531 493 aa17.21■□□□□ 0.35
NDUFA9-202ENST00000396655 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
NDUFA9-202ENST00000396655 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.34
NDUFA9-202ENST00000396655 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
NDUFA9-202ENST00000396655 MSH5O43196 834 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms