RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FANCAO15360 1455 aa25.62■■□□□ 1.69
AP1S3-202ENST00000396653 PHLDB1Q86UU1 1377 aa25.62■■□□□ 1.69
AP1S3-202ENST00000396653 CCNB3Q8WWL7 1395 aa25.62■■□□□ 1.69
AP1S3-202ENST00000396653 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
AP1S3-202ENST00000396653 KDM6BO15054 1643 aa25.56■■□□□ 1.68
AP1S3-202ENST00000396653 EFCAB2Q5VUJ9 269 aa25.54■■□□□ 1.68
AP1S3-202ENST00000396653 AKNAQ7Z591 1439 aa25.54■■□□□ 1.68
AP1S3-202ENST00000396653 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
AP1S3-202ENST00000396653 SAMD9LQ8IVG5 1584 aa25.52■■□□□ 1.68
AP1S3-202ENST00000396653 ABCC1P33527 1531 aa25.51■■□□□ 1.67
AP1S3-202ENST00000396653 ADGRL1O94910 1474 aa25.5■■□□□ 1.67
AP1S3-202ENST00000396653 MIA2Q96PC5 1412 aa25.49■■□□□ 1.67
AP1S3-202ENST00000396653 PLEKHH2Q8IVE3 1493 aa25.48■■□□□ 1.67
AP1S3-202ENST00000396653 CFDP1Q9UEE9 299 aaPredicted RBP25.48■■□□□ 1.67
AP1S3-202ENST00000396653 RICTORQ6R327 1708 aa25.47■■□□□ 1.67
AP1S3-202ENST00000396653 COL17A1Q9UMD9 1497 aaPredicted RBP25.45■■□□□ 1.66
AP1S3-202ENST00000396653 DENND4BO75064 1496 aaPredicted RBP25.44■■□□□ 1.66
AP1S3-202ENST00000396653 FRMPD1Q5SYB0 1578 aa25.44■■□□□ 1.66
AP1S3-202ENST00000396653 KIAA1107Q9UPP5 1409 aa25.43■■□□□ 1.66
AP1S3-202ENST00000396653 CAMSAP2Q08AD1 1489 aa25.42■■□□□ 1.66
AP1S3-202ENST00000396653 FGD6Q6ZV73 1430 aa25.42■■□□□ 1.66
AP1S3-202ENST00000396653 SCAPERQ9BY12 1400 aa25.42■■□□□ 1.66
AP1S3-202ENST00000396653 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
AP1S3-202ENST00000396653 PTPN23Q9H3S7 1636 aa25.41■■□□□ 1.66
AP1S3-202ENST00000396653 POGZQ7Z3K3 1410 aa25.4■■□□□ 1.66
AP1S3-202ENST00000396653 TCOF1Q13428 1488 aaKnown RBP25.39■■□□□ 1.65
AP1S3-202ENST00000396653 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
AP1S3-202ENST00000396653 ARHGEF12Q9NZN5 1544 aa25.38■■□□□ 1.65
AP1S3-202ENST00000396653 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
AP1S3-202ENST00000396653 ZNF518AQ6AHZ1 1483 aa25.38■■□□□ 1.65
AP1S3-202ENST00000396653 KDM5CP41229 1560 aa25.37■■□□□ 1.65
AP1S3-202ENST00000396653 ARHGEF5Q12774 1597 aa25.36■■□□□ 1.65
AP1S3-202ENST00000396653 PPARGC1BQ86YN6 1023 aaKnown RBP25.35■■□□□ 1.65
AP1S3-202ENST00000396653 MBD5Q9P267 1494 aa25.34■■□□□ 1.65
AP1S3-202ENST00000396653 ZNF644Q9H582 1327 aaPredicted RBP25.32■■□□□ 1.64
AP1S3-202ENST00000396653 TRAPPC8Q9Y2L5 1435 aa25.31■■□□□ 1.64
AP1S3-202ENST00000396653 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
AP1S3-202ENST00000396653 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
AP1S3-202ENST00000396653 MAGI2Q86UL8 1455 aa25.29■■□□□ 1.64
AP1S3-202ENST00000396653 RAPGEF3O95398 923 aa25.29■■□□□ 1.64
AP1S3-202ENST00000396653 DNMT1P26358 1616 aaKnown RBP25.27■■□□□ 1.64
AP1S3-202ENST00000396653 CROCC2H7BZ55 1655 aa25.27■■□□□ 1.64
AP1S3-202ENST00000396653 RSPH4AQ5TD94 716 aa25.27■■□□□ 1.64
AP1S3-202ENST00000396653 RRBP1Q9P2E9 1410 aaKnown RBP25.27■■□□□ 1.64
AP1S3-202ENST00000396653 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
AP1S3-202ENST00000396653 MLH3Q9UHC1 1453 aa25.26■■□□□ 1.63
AP1S3-202ENST00000396653 ARHGEF40Q8TER5 1519 aa25.26■■□□□ 1.63
AP1S3-202ENST00000396653 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
AP1S3-202ENST00000396653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.25■■□□□ 1.63
AP1S3-202ENST00000396653 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
AP1S3-202ENST00000396653 MAST1Q9Y2H9 1570 aa25.23■■□□□ 1.63
AP1S3-202ENST00000396653 ZFYVE16Q7Z3T8 1539 aa25.23■■□□□ 1.63
AP1S3-202ENST00000396653 AFAP1Q8N556 730 aa25.22■■□□□ 1.63
AP1S3-202ENST00000396653 ATP7AQ04656 1500 aa25.21■■□□□ 1.63
AP1S3-202ENST00000396653 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
AP1S3-202ENST00000396653 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
AP1S3-202ENST00000396653 DAPK1P53355 1430 aa25.19■■□□□ 1.62
AP1S3-202ENST00000396653 ABCA6Q8N139 1617 aa25.17■■□□□ 1.62
AP1S3-202ENST00000396653 ABCC5O15440 1437 aa25.17■■□□□ 1.62
AP1S3-202ENST00000396653 DIP2CQ9Y2E4 1556 aa25.17■■□□□ 1.62
AP1S3-202ENST00000396653 SPAG9O60271 1321 aaKnown RBP25.16■■□□□ 1.62
AP1S3-202ENST00000396653 YEATS2Q9ULM3 1422 aa25.15■■□□□ 1.62
AP1S3-202ENST00000396653 FAM50AQ14320 339 aaKnown RBP25.15■■□□□ 1.62
AP1S3-202ENST00000396653 REREQ9P2R6 1566 aa25.14■■□□□ 1.62
AP1S3-202ENST00000396653 PLXNC1O60486 1568 aa25.14■■□□□ 1.61
AP1S3-202ENST00000396653 ADGBQ8N7X0 1667 aa25.13■■□□□ 1.61
AP1S3-202ENST00000396653 C9orf84Q5VXU9 1444 aa25.13■■□□□ 1.61
AP1S3-202ENST00000396653 TSPY4P0CV99 314 aa25.11■■□□□ 1.61
AP1S3-202ENST00000396653 TSPY10P0CW01 314 aa25.11■■□□□ 1.61
AP1S3-202ENST00000396653 ATP10AO60312 1499 aa25.1■■□□□ 1.61
AP1S3-202ENST00000396653 ADGRL2O95490 1459 aa25.08■■□□□ 1.6
AP1S3-202ENST00000396653 MYT1LQ9UL68 1186 aa25.07■■□□□ 1.6
AP1S3-202ENST00000396653 SIGLEC1Q9BZZ2 1709 aa25.03■■□□□ 1.6
AP1S3-202ENST00000396653 AGLP35573 1532 aa25.02■■□□□ 1.6
AP1S3-202ENST00000396653 A2MP01023 1474 aa25.02■■□□□ 1.6
AP1S3-202ENST00000396653 PTPRKQ15262 1439 aa25.01■■□□□ 1.59
AP1S3-202ENST00000396653 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
AP1S3-202ENST00000396653 BCORL1Q5H9F3 1711 aa24.99■■□□□ 1.59
AP1S3-202ENST00000396653 DUOX2Q9NRD8 1548 aa24.99■■□□□ 1.59
AP1S3-202ENST00000396653 NCOA1Q15788 1441 aa24.98■■□□□ 1.59
AP1S3-202ENST00000396653 ROCK1Q13464 1354 aa24.98■■□□□ 1.59
AP1S3-202ENST00000396653 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
AP1S3-202ENST00000396653 DHX29Q7Z478 1369 aaKnown RBP24.95■■□□□ 1.59
AP1S3-202ENST00000396653 KIF15Q9NS87 1388 aa24.95■■□□□ 1.59
AP1S3-202ENST00000396653 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
AP1S3-202ENST00000396653 ERBINQ96RT1 1412 aa24.92■■□□□ 1.58
AP1S3-202ENST00000396653 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
AP1S3-202ENST00000396653 ITGAEP38570 1179 aa24.9■■□□□ 1.58
AP1S3-202ENST00000396653 RNF17Q9BXT8 1623 aaKnown RBP24.88■■□□□ 1.57
AP1S3-202ENST00000396653 ADAMTSL3P82987 1691 aa24.87■■□□□ 1.57
AP1S3-202ENST00000396653 RRP7BPQ9NSQ0 103 aa24.86■■□□□ 1.57
AP1S3-202ENST00000396653 ARID4BQ4LE39 1312 aaPredicted RBP24.86■■□□□ 1.57
AP1S3-202ENST00000396653 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
AP1S3-202ENST00000396653 FAM135AQ9P2D6 1515 aa24.83■■□□□ 1.57
AP1S3-202ENST00000396653 HFM1A2PYH4 1435 aa24.83■■□□□ 1.57
AP1S3-202ENST00000396653 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
AP1S3-202ENST00000396653 FER1L4A9Z1Z3 1794 aa24.82■■□□□ 1.56
AP1S3-202ENST00000396653 MROH1Q8NDA8 1641 aa24.79■■□□□ 1.56
AP1S3-202ENST00000396653 MADDQ8WXG6 1647 aa24.79■■□□□ 1.56
AP1S3-202ENST00000396653 NAIPQ13075 1403 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms