RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 ITSN2Q9NZM3 1697 aa26.75■■□□□ 1.87
HLA-A-204ENST00000396634 TEX14Q8IWB6 1497 aa26.73■■□□□ 1.87
HLA-A-204ENST00000396634 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
HLA-A-204ENST00000396634 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
HLA-A-204ENST00000396634 CFDP1Q9UEE9 299 aaPredicted RBP26.69■■□□□ 1.86
HLA-A-204ENST00000396634 SAMD9LQ8IVG5 1584 aa26.68■■□□□ 1.86
HLA-A-204ENST00000396634 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
HLA-A-204ENST00000396634 MYOM3Q5VTT5 1437 aa26.67■■□□□ 1.86
HLA-A-204ENST00000396634 COL17A1Q9UMD9 1497 aaPredicted RBP26.67■■□□□ 1.86
HLA-A-204ENST00000396634 AKNAQ7Z591 1439 aa26.66■■□□□ 1.86
HLA-A-204ENST00000396634 CFAP74Q9C0B2 1584 aa26.66■■□□□ 1.86
HLA-A-204ENST00000396634 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
HLA-A-204ENST00000396634 NEO1Q92859 1461 aa26.64■■□□□ 1.86
HLA-A-204ENST00000396634 KDM6BO15054 1643 aa26.63■■□□□ 1.85
HLA-A-204ENST00000396634 ADGRL1O94910 1474 aa26.63■■□□□ 1.85
HLA-A-204ENST00000396634 ARHGEF12Q9NZN5 1544 aa26.61■■□□□ 1.85
HLA-A-204ENST00000396634 ABCC1P33527 1531 aa26.6■■□□□ 1.85
HLA-A-204ENST00000396634 SYCP2Q9BX26 1530 aa26.6■■□□□ 1.85
HLA-A-204ENST00000396634 CAMSAP2Q08AD1 1489 aa26.59■■□□□ 1.85
HLA-A-204ENST00000396634 RAPGEF3O95398 923 aa26.59■■□□□ 1.85
HLA-A-204ENST00000396634 FGD6Q6ZV73 1430 aa26.59■■□□□ 1.85
HLA-A-204ENST00000396634 SCAPERQ9BY12 1400 aa26.58■■□□□ 1.85
HLA-A-204ENST00000396634 PTPN23Q9H3S7 1636 aa26.58■■□□□ 1.84
HLA-A-204ENST00000396634 HNRNPMP52272 730 aaKnown RBP eCLIP26.56■■□□□ 1.84
HLA-A-204ENST00000396634 FRMPD1Q5SYB0 1578 aa26.56■■□□□ 1.84
HLA-A-204ENST00000396634 RICTORQ6R327 1708 aa26.54■■□□□ 1.84
HLA-A-204ENST00000396634 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
HLA-A-204ENST00000396634 MIA2Q96PC5 1412 aa26.52■■□□□ 1.84
HLA-A-204ENST00000396634 DENND4BO75064 1496 aaPredicted RBP26.52■■□□□ 1.84
HLA-A-204ENST00000396634 AFAP1Q8N556 730 aa26.5■■□□□ 1.83
HLA-A-204ENST00000396634 FAM50AQ14320 339 aaKnown RBP26.49■■□□□ 1.83
HLA-A-204ENST00000396634 POGZQ7Z3K3 1410 aa26.49■■□□□ 1.83
HLA-A-204ENST00000396634 MBD5Q9P267 1494 aa26.46■■□□□ 1.83
HLA-A-204ENST00000396634 TCOF1Q13428 1488 aaKnown RBP26.45■■□□□ 1.82
HLA-A-204ENST00000396634 PLEKHH2Q8IVE3 1493 aa26.45■■□□□ 1.82
HLA-A-204ENST00000396634 KIAA1107Q9UPP5 1409 aa26.44■■□□□ 1.82
HLA-A-204ENST00000396634 ZNF518AQ6AHZ1 1483 aa26.42■■□□□ 1.82
HLA-A-204ENST00000396634 KDM5CP41229 1560 aa26.4■■□□□ 1.82
HLA-A-204ENST00000396634 RRBP1Q9P2E9 1410 aaKnown RBP26.39■■□□□ 1.81
HLA-A-204ENST00000396634 CCDC141Q6ZP82 1450 aa26.38■■□□□ 1.81
HLA-A-204ENST00000396634 ARHGEF5Q12774 1597 aa26.38■■□□□ 1.81
HLA-A-204ENST00000396634 ITGAEP38570 1179 aa26.38■■□□□ 1.81
HLA-A-204ENST00000396634 DNMT1P26358 1616 aaKnown RBP26.37■■□□□ 1.81
HLA-A-204ENST00000396634 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
HLA-A-204ENST00000396634 YEATS2Q9ULM3 1422 aa26.36■■□□□ 1.81
HLA-A-204ENST00000396634 ZMYM4Q5VZL5 1548 aa26.36■■□□□ 1.81
HLA-A-204ENST00000396634 CROCC2H7BZ55 1655 aa26.36■■□□□ 1.81
HLA-A-204ENST00000396634 HECW2Q9P2P5 1572 aa26.36■■□□□ 1.81
HLA-A-204ENST00000396634 KIDINS220Q9ULH0 1771 aa26.35■■□□□ 1.81
HLA-A-204ENST00000396634 ABCC5O15440 1437 aa26.34■■□□□ 1.81
HLA-A-204ENST00000396634 DAPK1P53355 1430 aa26.34■■□□□ 1.81
HLA-A-204ENST00000396634 INO80Q9ULG1 1556 aaPredicted RBP26.32■■□□□ 1.8
HLA-A-204ENST00000396634 ZFYVE16Q7Z3T8 1539 aa26.32■■□□□ 1.8
HLA-A-204ENST00000396634 SPAG9O60271 1321 aaKnown RBP26.32■■□□□ 1.8
HLA-A-204ENST00000396634 ABCA6Q8N139 1617 aa26.31■■□□□ 1.8
HLA-A-204ENST00000396634 CHIC2Q9UKJ5 165 aa26.31■■□□□ 1.8
HLA-A-204ENST00000396634 ATP7AQ04656 1500 aa26.31■■□□□ 1.8
HLA-A-204ENST00000396634 PTPRKQ15262 1439 aa26.3■■□□□ 1.8
HLA-A-204ENST00000396634 ARHGEF40Q8TER5 1519 aa26.29■■□□□ 1.8
HLA-A-204ENST00000396634 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
HLA-A-204ENST00000396634 SIGLEC1Q9BZZ2 1709 aa26.27■■□□□ 1.8
HLA-A-204ENST00000396634 DIP2CQ9Y2E4 1556 aa26.26■■□□□ 1.79
HLA-A-204ENST00000396634 MLH3Q9UHC1 1453 aa26.26■■□□□ 1.79
HLA-A-204ENST00000396634 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
HLA-A-204ENST00000396634 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
HLA-A-204ENST00000396634 ADGBQ8N7X0 1667 aa26.23■■□□□ 1.79
HLA-A-204ENST00000396634 MAST1Q9Y2H9 1570 aa26.22■■□□□ 1.79
HLA-A-204ENST00000396634 MAGI2Q86UL8 1455 aa26.22■■□□□ 1.79
HLA-A-204ENST00000396634 RSPH4AQ5TD94 716 aa26.21■■□□□ 1.79
HLA-A-204ENST00000396634 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.21■■□□□ 1.79
HLA-A-204ENST00000396634 SHANK2Q9UPX8 1470 aa26.21■■□□□ 1.79
HLA-A-204ENST00000396634 RTEL1-TNFRSF6BF6WH68 1400 aa26.17■■□□□ 1.78
HLA-A-204ENST00000396634 RRP7BPQ9NSQ0 103 aa26.17■■□□□ 1.78
HLA-A-204ENST00000396634 ATP10AO60312 1499 aa26.15■■□□□ 1.78
HLA-A-204ENST00000396634 PLXNC1O60486 1568 aa26.15■■□□□ 1.78
HLA-A-204ENST00000396634 KIF15Q9NS87 1388 aa26.12■■□□□ 1.77
HLA-A-204ENST00000396634 NCOA1Q15788 1441 aa26.11■■□□□ 1.77
HLA-A-204ENST00000396634 A2MP01023 1474 aa26.1■■□□□ 1.77
HLA-A-204ENST00000396634 ADGRL2O95490 1459 aa26.1■■□□□ 1.77
HLA-A-204ENST00000396634 ARID4BQ4LE39 1312 aaPredicted RBP26.1■■□□□ 1.77
HLA-A-204ENST00000396634 ANKRD30AQ9BXX3 1397 aa26.09■■□□□ 1.77
HLA-A-204ENST00000396634 MLECQ14165 292 aa26.06■■□□□ 1.76
HLA-A-204ENST00000396634 REREQ9P2R6 1566 aa26.04■■□□□ 1.76
HLA-A-204ENST00000396634 DHX29Q7Z478 1369 aaKnown RBP26.03■■□□□ 1.76
HLA-A-204ENST00000396634 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
HLA-A-204ENST00000396634 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
HLA-A-204ENST00000396634 GCC2Q8IWJ2 1684 aa25.98■■□□□ 1.75
HLA-A-204ENST00000396634 KIF3BO15066 747 aa25.98■■□□□ 1.75
HLA-A-204ENST00000396634 BCORL1Q5H9F3 1711 aa25.97■■□□□ 1.75
HLA-A-204ENST00000396634 NAIPQ13075 1403 aa25.97■■□□□ 1.75
HLA-A-204ENST00000396634 ANKRD50Q9ULJ7 1429 aa25.96■■□□□ 1.75
HLA-A-204ENST00000396634 AGLP35573 1532 aa25.96■■□□□ 1.75
HLA-A-204ENST00000396634 TRIM26Q12899 539 aaPredicted RBP25.96■■□□□ 1.75
HLA-A-204ENST00000396634 GGT6Q6P531 493 aa25.95■■□□□ 1.74
HLA-A-204ENST00000396634 ERBINQ96RT1 1412 aa25.94■■□□□ 1.74
HLA-A-204ENST00000396634 EIF2AK4Q9P2K8 1649 aaKnown RBP25.93■■□□□ 1.74
HLA-A-204ENST00000396634 HFM1A2PYH4 1435 aa25.92■■□□□ 1.74
HLA-A-204ENST00000396634 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
HLA-A-204ENST00000396634 MADDQ8WXG6 1647 aa25.9■■□□□ 1.74
HLA-A-204ENST00000396634 FER1L4A9Z1Z3 1794 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms