RNA–Protein interactions for RNA: ENST00000396573.6

GRIN2A-202, Transcript of glutamate ionotropic receptor NMDA type subunit 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRIN2A, Length 14,450 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2A-202ENST00000396573 TMF1P82094 1093 aa10.18□□□□□ -0.78
GRIN2A-202ENST00000396573 HTATSF1O43719 755 aaKnown RBP10.17□□□□□ -0.78
GRIN2A-202ENST00000396573 MTERF4Q7Z6M4 381 aaKnown RBP10.17□□□□□ -0.78
GRIN2A-202ENST00000396573 HSPA5P11021 654 aaKnown RBP10.17□□□□□ -0.78
GRIN2A-202ENST00000396573 PMFBP1Q8TBY8 1022 aa10.17□□□□□ -0.78
GRIN2A-202ENST00000396573 IPO8O15397 1037 aaKnown RBP10.17□□□□□ -0.78
GRIN2A-202ENST00000396573 SPRYD3Q8NCJ5 442 aa10.16□□□□□ -0.78
GRIN2A-202ENST00000396573 CSPP1Q1MSJ5 1256 aa10.16□□□□□ -0.78
GRIN2A-202ENST00000396573 TPRNQ4KMQ1 711 aa10.16□□□□□ -0.78
GRIN2A-202ENST00000396573 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.16□□□□□ -0.78
GRIN2A-202ENST00000396573 FGD1P98174 961 aa10.16□□□□□ -0.78
GRIN2A-202ENST00000396573 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.78
GRIN2A-202ENST00000396573 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
GRIN2A-202ENST00000396573 KCNJ4P48050 445 aa10.14□□□□□ -0.79
GRIN2A-202ENST00000396573 ARID3AQ99856 593 aa10.14□□□□□ -0.79
GRIN2A-202ENST00000396573 AMER1Q5JTC6 1135 aaPredicted RBP10.14□□□□□ -0.79
GRIN2A-202ENST00000396573 MAP7D2Q96T17 732 aa10.14□□□□□ -0.79
GRIN2A-202ENST00000396573 FAM161AQ3B820 660 aa10.14□□□□□ -0.79
GRIN2A-202ENST00000396573 FMN1Q68DA7 1419 aa10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 CENPQQ7L2Z9 268 aaPredicted RBP10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 CFDP1Q9UEE9 299 aaPredicted RBP10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 EIF3AQ14152 1382 aaKnown RBP10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 ABCC8Q09428 1581 aa10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 CALD1Q05682 793 aaKnown RBP10.13□□□□□ -0.79
GRIN2A-202ENST00000396573 KIF15Q9NS87 1388 aa10.12□□□□□ -0.79
GRIN2A-202ENST00000396573 NEUROD2Q15784 382 aa10.12□□□□□ -0.79
GRIN2A-202ENST00000396573 SENP3-EIF4A1A0A087X0R7 540 aa10.12□□□□□ -0.79
GRIN2A-202ENST00000396573 SOGA1O94964 1423 aa10.12□□□□□ -0.79
GRIN2A-202ENST00000396573 TPM4P67936 248 aa10.12□□□□□ -0.79
GRIN2A-202ENST00000396573 PKNOX2Q96KN3 472 aa10.11□□□□□ -0.79
GRIN2A-202ENST00000396573 PDE4AP27815 886 aa10.11□□□□□ -0.79
GRIN2A-202ENST00000396573 SETQ01105 290 aaPredicted RBP10.11□□□□□ -0.79
GRIN2A-202ENST00000396573 KIAA1211Q6ZU35 1233 aa10.11□□□□□ -0.79
GRIN2A-202ENST00000396573 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
GRIN2A-202ENST00000396573 KIF16BQ96L93 1317 aa10.1□□□□□ -0.79
GRIN2A-202ENST00000396573 OS9Q13438 667 aaPredicted RBP10.1□□□□□ -0.79
GRIN2A-202ENST00000396573 RGL3Q3MIN7 710 aa10.1□□□□□ -0.79
GRIN2A-202ENST00000396573 ST18O60284 1047 aa10.1□□□□□ -0.79
GRIN2A-202ENST00000396573 PLEKHD1A6NEE1 506 aa10.09□□□□□ -0.79
GRIN2A-202ENST00000396573 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
GRIN2A-202ENST00000396573 DHX57Q6P158 1386 aaKnown RBP10.08□□□□□ -0.8
GRIN2A-202ENST00000396573 PPP1R15AO75807 674 aaPredicted RBP10.08□□□□□ -0.8
GRIN2A-202ENST00000396573 FAM43AQ8N2R8 423 aa10.07□□□□□ -0.8
GRIN2A-202ENST00000396573 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
GRIN2A-202ENST00000396573 TPM2P07951 284 aa10.07□□□□□ -0.8
GRIN2A-202ENST00000396573 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
GRIN2A-202ENST00000396573 ITPRIPQ8IWB1 547 aa10.06□□□□□ -0.8
GRIN2A-202ENST00000396573 KANK1Q14678 1352 aa10.06□□□□□ -0.8
GRIN2A-202ENST00000396573 CCDC34Q96HJ3 373 aa10.06□□□□□ -0.8
GRIN2A-202ENST00000396573 TEX35Q5T0J7 233 aa10.06□□□□□ -0.8
GRIN2A-202ENST00000396573 CENPJQ9HC77 1338 aaPredicted RBP10.05□□□□□ -0.8
GRIN2A-202ENST00000396573 MYBBP1AQ9BQG0 1328 aaKnown RBP10.05□□□□□ -0.8
GRIN2A-202ENST00000396573 ZNF771Q7L3S4 317 aaPredicted RBP10.05□□□□□ -0.8
GRIN2A-202ENST00000396573 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
GRIN2A-202ENST00000396573 PRKCSHP14314 528 aaPredicted RBP10.05□□□□□ -0.8
GRIN2A-202ENST00000396573 CGNL1Q0VF96 1302 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 GPS2Q13227 327 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 GOLGA2Q08379 1002 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 MORC1Q86VD1 984 aa10.04□□□□□ -0.8
GRIN2A-202ENST00000396573 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
GRIN2A-202ENST00000396573 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
GRIN2A-202ENST00000396573 HMMRO75330 724 aa10.03□□□□□ -0.8
GRIN2A-202ENST00000396573 NOC3LQ8WTT2 800 aaKnown RBP10.03□□□□□ -0.8
GRIN2A-202ENST00000396573 A0A0U1RQG5 324 aaPredicted RBP10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 NPM1P06748 294 aaKnown RBP eCLIP10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 GPATCH3Q96I76 525 aa10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 DDX49Q9Y6V7 483 aaKnown RBP10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 MRE11P49959 708 aa10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 FAM13BQ9NYF5 915 aa10.02□□□□□ -0.81
GRIN2A-202ENST00000396573 AAMPQ13685 434 aa10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 CCDC18Q5T9S5 1454 aa10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 RRP9O43818 475 aaKnown RBP10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 NOM1Q5C9Z4 860 aaKnown RBP10.01□□□□□ -0.81
GRIN2A-202ENST00000396573 CUX2O14529 1486 aa10□□□□□ -0.81
GRIN2A-202ENST00000396573 WIZO95785 1651 aa10□□□□□ -0.81
GRIN2A-202ENST00000396573 SMARCA2P51531 1590 aa10□□□□□ -0.81
GRIN2A-202ENST00000396573 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
GRIN2A-202ENST00000396573 KIF3AQ9Y496 699 aa10□□□□□ -0.81
GRIN2A-202ENST00000396573 CHMP4AQ9BY43 222 aa9.99□□□□□ -0.81
GRIN2A-202ENST00000396573 CCDC66A2RUB6 948 aa9.99□□□□□ -0.81
GRIN2A-202ENST00000396573 CHMP5Q9NZZ3 219 aa9.99□□□□□ -0.81
GRIN2A-202ENST00000396573 NFKBIBQ15653 356 aa9.99□□□□□ -0.81
GRIN2A-202ENST00000396573 NGEFQ8N5V2 710 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 CCDC39Q9UFE4 941 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 ANKRD30AQ9BXX3 1397 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 TPM3P06753 285 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 PRKRIP1Q9H875 184 aaPredicted RBP9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 HMGN5P82970 282 aaKnown RBP9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 CUX1P39880 1505 aa9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 KANK4Q5T7N3 995 aaPredicted RBP9.98□□□□□ -0.81
GRIN2A-202ENST00000396573 SMC4Q9NTJ3 1288 aa9.97□□□□□ -0.81
GRIN2A-202ENST00000396573 CALRP27797 417 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms