RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HRCP23327 699 aa19.16■□□□□ 0.66
TRIM39-204ENST00000396548 DAPK1P53355 1430 aa19.15■□□□□ 0.66
TRIM39-204ENST00000396548 ABCC5O15440 1437 aa19.15■□□□□ 0.66
TRIM39-204ENST00000396548 ARAP3Q8WWN8 1544 aa19.15■□□□□ 0.66
TRIM39-204ENST00000396548 CFDP1Q9UEE9 299 aaPredicted RBP19.15■□□□□ 0.66
TRIM39-204ENST00000396548 ITGAEP38570 1179 aa19.14■□□□□ 0.66
TRIM39-204ENST00000396548 MAPKBP1O60336 1514 aa19.14■□□□□ 0.65
TRIM39-204ENST00000396548 GCC2Q8IWJ2 1684 aa19.13■□□□□ 0.65
TRIM39-204ENST00000396548 PLCH2O75038 1416 aa19.13■□□□□ 0.65
TRIM39-204ENST00000396548 HFM1A2PYH4 1435 aa19.13■□□□□ 0.65
TRIM39-204ENST00000396548 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
TRIM39-204ENST00000396548 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
TRIM39-204ENST00000396548 AKNAQ7Z591 1439 aa19.12■□□□□ 0.65
TRIM39-204ENST00000396548 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
TRIM39-204ENST00000396548 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
TRIM39-204ENST00000396548 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
TRIM39-204ENST00000396548 NAIPQ13075 1403 aa19.09■□□□□ 0.65
TRIM39-204ENST00000396548 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
TRIM39-204ENST00000396548 ARHGAP5Q13017 1502 aa19.08■□□□□ 0.65
TRIM39-204ENST00000396548 ROCK1Q13464 1354 aa19.08■□□□□ 0.64
TRIM39-204ENST00000396548 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
TRIM39-204ENST00000396548 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
TRIM39-204ENST00000396548 ADGRL2O95490 1459 aa19.06■□□□□ 0.64
TRIM39-204ENST00000396548 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
TRIM39-204ENST00000396548 KIAA1107Q9UPP5 1409 aa19.05■□□□□ 0.64
TRIM39-204ENST00000396548 ABCC1P33527 1531 aa19.04■□□□□ 0.64
TRIM39-204ENST00000396548 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
TRIM39-204ENST00000396548 KDM6BO15054 1643 aa19.03■□□□□ 0.64
TRIM39-204ENST00000396548 SYCP2Q9BX26 1530 aa19.03■□□□□ 0.64
TRIM39-204ENST00000396548 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
TRIM39-204ENST00000396548 MAST1Q9Y2H9 1570 aa19.02■□□□□ 0.64
TRIM39-204ENST00000396548 PLEKHH2Q8IVE3 1493 aa19.02■□□□□ 0.64
TRIM39-204ENST00000396548 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
TRIM39-204ENST00000396548 GLI2P10070 1586 aa19.01■□□□□ 0.63
TRIM39-204ENST00000396548 CCDC141Q6ZP82 1450 aa19■□□□□ 0.63
TRIM39-204ENST00000396548 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
TRIM39-204ENST00000396548 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
TRIM39-204ENST00000396548 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
TRIM39-204ENST00000396548 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
TRIM39-204ENST00000396548 HNRNPMP52272 730 aaKnown RBP eCLIP18.97■□□□□ 0.63
TRIM39-204ENST00000396548 C9orf84Q5VXU9 1444 aa18.96■□□□□ 0.63
TRIM39-204ENST00000396548 FANCAO15360 1455 aa18.96■□□□□ 0.63
TRIM39-204ENST00000396548 EFCAB2Q5VUJ9 269 aa18.95■□□□□ 0.62
TRIM39-204ENST00000396548 DIP2BQ9P265 1576 aa18.95■□□□□ 0.62
TRIM39-204ENST00000396548 RSPH4AQ5TD94 716 aa18.95■□□□□ 0.62
TRIM39-204ENST00000396548 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
TRIM39-204ENST00000396548 CFAP74Q9C0B2 1584 aa18.94■□□□□ 0.62
TRIM39-204ENST00000396548 RRP7BPQ9NSQ0 103 aa18.93■□□□□ 0.62
TRIM39-204ENST00000396548 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
TRIM39-204ENST00000396548 CD109Q6YHK3 1445 aa18.92■□□□□ 0.62
TRIM39-204ENST00000396548 CLSPNQ9HAW4 1339 aa18.91■□□□□ 0.62
TRIM39-204ENST00000396548 TRAPPC8Q9Y2L5 1435 aa18.91■□□□□ 0.62
TRIM39-204ENST00000396548 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
TRIM39-204ENST00000396548 PPRC1Q5VV67 1664 aaKnown RBP18.88■□□□□ 0.61
TRIM39-204ENST00000396548 KIF13AQ9H1H9 1805 aa18.88■□□□□ 0.61
TRIM39-204ENST00000396548 DENND4BO75064 1496 aaPredicted RBP18.87■□□□□ 0.61
TRIM39-204ENST00000396548 INO80Q9ULG1 1556 aaPredicted RBP18.87■□□□□ 0.61
TRIM39-204ENST00000396548 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
TRIM39-204ENST00000396548 ZFYVE16Q7Z3T8 1539 aa18.86■□□□□ 0.61
TRIM39-204ENST00000396548 NEO1Q92859 1461 aa18.85■□□□□ 0.61
TRIM39-204ENST00000396548 TSPY4P0CV99 314 aa18.85■□□□□ 0.61
TRIM39-204ENST00000396548 TSPY10P0CW01 314 aa18.85■□□□□ 0.61
TRIM39-204ENST00000396548 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
TRIM39-204ENST00000396548 KDM5CP41229 1560 aa18.83■□□□□ 0.6
TRIM39-204ENST00000396548 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
TRIM39-204ENST00000396548 ANKRD50Q9ULJ7 1429 aa18.82■□□□□ 0.6
TRIM39-204ENST00000396548 KIF15Q9NS87 1388 aa18.82■□□□□ 0.6
TRIM39-204ENST00000396548 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
TRIM39-204ENST00000396548 KDM5DQ9BY66 1539 aa18.8■□□□□ 0.6
TRIM39-204ENST00000396548 DUOX2Q9NRD8 1548 aa18.79■□□□□ 0.6
TRIM39-204ENST00000396548 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
TRIM39-204ENST00000396548 ATP7AQ04656 1500 aa18.79■□□□□ 0.6
TRIM39-204ENST00000396548 POGZQ7Z3K3 1410 aa18.78■□□□□ 0.6
TRIM39-204ENST00000396548 RICTORQ6R327 1708 aa18.78■□□□□ 0.6
TRIM39-204ENST00000396548 PZPP20742 1482 aa18.78■□□□□ 0.6
TRIM39-204ENST00000396548 UNC13BO14795 1591 aa18.78■□□□□ 0.6
TRIM39-204ENST00000396548 ZNF518AQ6AHZ1 1483 aa18.78■□□□□ 0.6
TRIM39-204ENST00000396548 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
TRIM39-204ENST00000396548 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
TRIM39-204ENST00000396548 FAM69CQ0P6D2 419 aa18.75■□□□□ 0.59
TRIM39-204ENST00000396548 FRMPD1Q5SYB0 1578 aa18.75■□□□□ 0.59
TRIM39-204ENST00000396548 MAGI2Q86UL8 1455 aa18.74■□□□□ 0.59
TRIM39-204ENST00000396548 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
TRIM39-204ENST00000396548 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
TRIM39-204ENST00000396548 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
TRIM39-204ENST00000396548 HECW2Q9P2P5 1572 aa18.72■□□□□ 0.59
TRIM39-204ENST00000396548 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
TRIM39-204ENST00000396548 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
TRIM39-204ENST00000396548 EIF2AK4Q9P2K8 1649 aaKnown RBP18.7■□□□□ 0.58
TRIM39-204ENST00000396548 DNAJC5Q9H3Z4 198 aa18.69■□□□□ 0.58
TRIM39-204ENST00000396548 IQGAP3Q86VI3 1631 aa18.69■□□□□ 0.58
TRIM39-204ENST00000396548 TEX14Q8IWB6 1497 aa18.69■□□□□ 0.58
TRIM39-204ENST00000396548 ABCA6Q8N139 1617 aa18.68■□□□□ 0.58
TRIM39-204ENST00000396548 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
TRIM39-204ENST00000396548 ZMYM4Q5VZL5 1548 aa18.67■□□□□ 0.58
TRIM39-204ENST00000396548 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
TRIM39-204ENST00000396548 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
TRIM39-204ENST00000396548 MROH1Q8NDA8 1641 aa18.64■□□□□ 0.58
TRIM39-204ENST00000396548 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
TRIM39-204ENST00000396548 VWDEQ8N2E2 1590 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms